; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0004892 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004892
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase
Genome locationchr06:23751744..23752198
RNA-Seq ExpressionPay0004892
SyntenyPay0004892
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035840.1 integrase [Cucumis melo var. makuwa]2.4e-5699.12Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELT QQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKIKW
        RSTYQGEDKFKIKW
Subjt:  RSTYQGEDKFKIKW
KAA0039947.1 integrase [Cucumis melo var. makuwa]3.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
KAA0041660.1 integrase [Cucumis melo var. makuwa]3.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
TYJ95504.1 integrase [Cucumis melo var. makuwa]3.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
XP_016903256.1 PREDICTED: uncharacterized protein LOC107992100 [Cucumis melo]3.1e-5698.25Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRF+GKNFNQWSI+MKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKIKW
        RSTYQGEDKFKIKW
Subjt:  RSTYQGEDKFKIKW
TrEMBL top hitse value%identityAlignment
A0A1S4E4V0 uncharacterized protein LOC1079921001.5e-5698.25Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRF+GKNFNQWSI+MKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKIKW
        RSTYQGEDKFKIKW
Subjt:  RSTYQGEDKFKIKW
A0A5A7SXS2 Integrase1.1e-5699.12Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELT QQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKIKW
        RSTYQGEDKFKIKW
Subjt:  RSTYQGEDKFKIKW
A0A5D3BQ81 Integrase1.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
A0A5D3CLV1 Integrase1.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
A0A5D3E3T2 Integrase1.8e-5498.21Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
        MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDIL

Query:  RSTYQGEDKFKI
        RSTYQGEDK K+
Subjt:  RSTYQGEDKFKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein1.4e-1745.74Show/hide
Query:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAK
        MASN   +  Q+P  +  N++ WS++MK + G+ ++W+IVE+G+ E EN+  L+  Q   LR++RK+DKKAL  IYQ +DE  FE++  ATSAK
Subjt:  MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAATGGTAACATGTTGCAACCCCAACTTCCAAGGTTCAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTG
GGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCT
TCATTTATCAAGCTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCGGCTTGGGATATTCTAAGATCTACCTATCAAGGAGAAGATAAGTTT
AAGATCAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGAATGGTAACATGTTGCAACCCCAACTTCCAAGGTTCAGCGGAAAGAATTTTAATCAATGGAGTATTCAAATGAAAGTGTTATATGGCTCTCAAGAATTGTG
GGATATTGTTGAAAGAGGATACACTGAAGTTGAGAATCAGAGTGAGCTCACAAATCAACAACTTGTTGAGTTAAGAGAAAATCGTAAGAAAGACAAAAAGGCTTTATTCT
TCATTTATCAAGCTGTTGATGAATTTATTTTCGAGAGAATTTCAACAGCTACTTCTGCAAAGGCGGCTTGGGATATTCTAAGATCTACCTATCAAGGAGAAGATAAGTTT
AAGATCAAATGGTGA
Protein sequenceShow/hide protein sequence
MASNGNMLQPQLPRFSGKNFNQWSIQMKVLYGSQELWDIVERGYTEVENQSELTNQQLVELRENRKKDKKALFFIYQAVDEFIFERISTATSAKAAWDILRSTYQGEDKF
KIKW