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Pay0004909 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0004909
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionVIN3-like protein 1
Genome locationchr07:22769644..22772619
RNA-Seq ExpressionPay0004909
SyntenyPay0004909
Gene Ontology termsGO:0010048 - vernalization response (biological process)
GO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0040029 - regulation of gene expression, epigenetic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR044514 - Vernalization insensitive 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00084.1 VIN3-like protein 1 isoform X1 [Cucumis melo var. makuwa]1.1e-1383.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
XP_008463367.1 PREDICTED: VIN3-like protein 1 isoform X1 [Cucumis melo]1.1e-1383.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
XP_008463370.1 PREDICTED: VIN3-like protein 1 isoform X2 [Cucumis melo]1.1e-1383.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
XP_008463371.1 PREDICTED: VIN3-like protein 1 isoform X3 [Cucumis melo]1.1e-1383.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
XP_011656456.1 VIN3-like protein 1 isoform X1 [Cucumis sativus]1.1e-1383.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
TrEMBL top hitse value%identityAlignment
A0A0A0LZI3 Fibronectin type-III domain-containing protein5.4e-1483.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
A0A1S3CJ45 VIN3-like protein 1 isoform X25.4e-1483.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
A0A1S3CJJ2 VIN3-like protein 1 isoform X15.4e-1483.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
A0A5A7TZG4 VIN3-like protein 1 isoform X15.4e-1483.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
A0A5D3BLD1 VIN3-like protein 1 isoform X15.4e-1483.93Show/hide
Query:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
        RL LL    +RSTEQE RVVNTFIQTLIDEPSSLAGQLVDSF DIISCKK RNGFC
Subjt:  RLNLLL---IRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFC
SwissProt top hitse value%identityAlignment
Q9LHF5 VIN3-like protein 12.5e-0850Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFCIS
        F++W  ++     ST QE  VV+TF+QTL D+P SLAGQLVD+F D++S K+  NG   S
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFCIS
Q9SUM4 VIN3-like protein 27.6e-0548.08Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
        F++W  L     R+T QE RVV  FI T ID+P +LA QL+D+F D +S K+
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
Arabidopsis top hitse value%identityAlignment
AT3G24440.1 Fibronectin type III domain-containing protein1.8e-0950Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFCIS
        F++W  ++     ST QE  VV+TF+QTL D+P SLAGQLVD+F D++S K+  NG   S
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFCIS
AT4G30200.1 vernalization5/VIN3-like5.4e-0648.08Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
        F++W  L     R+T QE RVV  FI T ID+P +LA QL+D+F D +S K+
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
AT4G30200.2 vernalization5/VIN3-like5.4e-0648.08Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
        F++W  L     R+T QE RVV  FI T ID+P +LA QL+D+F D +S K+
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
AT4G30200.3 vernalization5/VIN3-like5.4e-0648.08Show/hide
Query:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK
        F++W  L     R+T QE RVV  FI T ID+P +LA QL+D+F D +S K+
Subjt:  FMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATGAGTTGGAGCCGGTTGAATTTGTTGCTGATCAGATCAACCGAGCAAGAAGATAGAGTAGTCAACACTTTTATCCAAACACTGATTGATGAACCTAGTAGCTT
GGCTGGACAGTTAGTTGACTCCTTTTTTGATATCATATCTTGCAAGAAGTTTCGAAATGGGTTCTGCATTTCAGCAGAGGATGTAGCACATGTGGATAACGATGGCACTT
CTGAAGATCAGAAGTATGCTACAGGACCACCGCCTGGTTGGGGAGGCTACGGTGGAGGCGGCGGCGGCAGTGTATGGAAAGGAGGCAGCGGGAAGGGTGGAGGTAGAAAA
GGAGGAGGCAGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATGAGTTGGAGCCGGTTGAATTTGTTGCTGATCAGATCAACCGAGCAAGAAGATAGAGTAGTCAACACTTTTATCCAAACACTGATTGATGAACCTAGTAGCTT
GGCTGGACAGTTAGTTGACTCCTTTTTTGATATCATATCTTGCAAGAAGTTTCGAAATGGGTTCTGCATTTCAGCAGAGGATGTAGCACATGTGGATAACGATGGCACTT
CTGAAGATCAGAAGTATGCTACAGGACCACCGCCTGGTTGGGGAGGCTACGGTGGAGGCGGCGGCGGCAGTGTATGGAAAGGAGGCAGCGGGAAGGGTGGAGGTAGAAAA
GGAGGAGGCAGAAACTGA
Protein sequenceShow/hide protein sequence
MFMSWSRLNLLLIRSTEQEDRVVNTFIQTLIDEPSSLAGQLVDSFFDIISCKKFRNGFCISAEDVAHVDNDGTSEDQKYATGPPPGWGGYGGGGGGSVWKGGSGKGGGRK
GGGRN