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Pay0005592 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0005592
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationchr07:6711069..6713432
RNA-Seq ExpressionPay0005592
SyntenyPay0005592
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591934.1 hypothetical protein SDJN03_14280, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3485.42Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

XP_004146043.1 uncharacterized protein At4g28440 [Cucumis sativus]1.8e-4398.96Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

XP_008463705.1 PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo]4.8e-44100Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

XP_022139613.1 uncharacterized protein At4g28440-like [Momordica charantia]2.1e-3990.62Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

XP_038899654.1 uncharacterized protein At4g28440-like [Benincasa hispida]1.4e-4398.96Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQ+NAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

TrEMBL top hitse value%identityAlignment
A0A0A0L242 Uncharacterized protein8.9e-4498.96Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

A0A1S3CKC4 uncharacterized protein At4g28440-like2.3e-44100Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

A0A5D3DWE0 Nucleic acid-binding2.3e-44100Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

A0A6J1CG19 uncharacterized protein At4g28440-like1.0e-3990.62Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

A0A6J1FBC1 uncharacterized protein At4g28440-like1.7e-3485.42Show/hide
Query:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVK
Subjt:  MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284401.6e-1862.34Show/hide
Query:  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        RKPVFVK+EQLKPGT GHTL VKV+ +N V+   R      S+S+  + +RI ECL+GDETG ILFTARNDQVD +K
Subjt:  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

Arabidopsis top hitse value%identityAlignment
AT1G03810.1 Nucleic acid-binding, OB-fold-like protein7.2e-2263.1Show/hide
Query:  TNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTV---LQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKT
        TNA   P  RKPVFVK++QLKPGT+GHTLIVKV+ SN V   ++K     Q +   RIAECL+GD+TG ILFTARNDQVD +KT
Subjt:  TNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTV---LQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKT

AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.6e-2162.5Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

AT1G10590.2 Nucleic acid-binding, OB-fold-like protein1.6e-2162.5Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.6e-2162.5Show/hide
Query:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K
Subjt:  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein5.5e-2259.74Show/hide
Query:  AARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK
        + + GL+KP F K++QL+PGT+GH + VK+VS+  VLQKGR+     RQ RI+EC+VGDETG I+FTARNDQVD +K
Subjt:  AARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAGGGAAATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAA
ACCCGGTACCAATGGTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGT
GCCTTGTTGGCGACGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAAGTAAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACAT
GTTCAAAGGGTCTATGAGGCTAGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTGGTTTAGAAAAATGTCACAAAAAAAAAAGCCAAAGAGGAAGAAAGAACAAAGAATGAAGTGAAGAGATGCTATTGCTATATATATAAACGCCACTCTCCTAAATTCT
CACAATTCACAGCGCCACACACACAAACCTAAATCCATCGAGAAAGAAGACAACTTTCGGTCCATTTTCACGGATTCGGATTCAGCTTTCGCATCAATGGCGACAGGGAA
ATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAACCCGGTACCAATG
GTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTGCCTTGTTGGCGAC
GAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAAGTAAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATGTTCAAAGGGTCTA
TGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTT
GCAGAGGAATGAGAAGGTACTACTGAATGCCAACTTTAAGACAATGGGTTGAGATGGCTGGTCAGTGAGTTTCCTGGTAATCTGCAGATGTGAATATATAACAACGCTAT
ATTATAATTTTGTGTGGGTGAAGTATTTAAGCGAACAATCCCTTGATTTCTTCTAAAGCTCTATTCCGTCGGTTTGACTTACACAAAGCCATGTTTTGTCGGGTAAAGGT
ATAAATAGGTACTAGTTTGGTACTTGTTATAACTCTGGAAATGTAATAGAGCGTTAACGACGGCAAAGAATGCTTTTGGTATGCCTTTGATATCATATCTAACATGCAAA
GTTTTCAATTTGCTGGGTTTGTATATTGTATATTCTCTGGCAATTCATATTACATGCAGGTTGTGGACAATAACTTGTCCTAGAAGGTGGCTTTACTTTGAAGGCAATAG
CAAAAGTATTTTGGACCAATATAGAAGGTAAAATGTCTCAACTTTAACGAGCATTAGTCTGTGAATTGATCCCTTTAAGTCGTACCATCGAACCTTTCCATCATTCTAAT
CTCTTGGTCGAGAGCACATGCCATAATTAGTTTATTATGTGTAGGTTGGTTTTCCTGTAAGCTAGTTTGTTTAGTGATAATCGATTGAACTGCCCTTAGACAGTGGTGGG
TTGGATTAATCCCCACGTCTTCTTCCATTCATTCTAAGAACAGTTGGACGAAATTAGAGTTTCATGTGTTGATGGTGAAACAATGTTAAATATGATAAATACATACTGAA
TTAGTA
Protein sequenceShow/hide protein sequence
MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKTWDNYHSSKCKDRH
VQRVYEASS