CuGenDBv2

Gene ID	Pay0005672
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr01:27180624..27182053
RNA-Seq Expression	Pay0005672
Synteny	Pay0005672
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]

2.5e-172

83.12

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQL TVKLDRKNYLLWKTLALPILK YKLEGHLT ETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------------------------------
        VN LFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK                                
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------------------------------

Query:  -----GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTE----------------NQSNKKFYGYNRQHFSGQRGNLNNGPT
             GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEK LKHQNTQKKKK + + T+                N SNKKFYGYNRQHFSGQRGNLNNGPT
Subjt:  -----GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTE----------------NQSNKKFYGYNRQHFSGQRGNLNNGPT

Query:  CQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
        CQLCGKYGHSALVCYNRFNKEFSSPLVQ+RNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
Subjt:  CQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]

5.0e-229

94.63

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
        SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS

Query:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC
        KLAQDNHIYIEFHGYCCFIKDKSTGKHC
Subjt:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]

1.3e-181

93.47

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
        SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]

1.1e-180

79.67

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLC                                   
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
                                     DSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS

Query:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC
        KLAQDNHIYIEFHGYCCFIKDKSTGKHC
Subjt:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]

3.0e-133

75.28

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLC                                   
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
                                     DSGATNHVTRECSNMTNPTEYSG
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X1

2.4e-229

94.63

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
        SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS

Query:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC
        KLAQDNHIYIEFHGYCCFIKDKSTGKHC
Subjt:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X4

5.4e-181

79.67

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLC                                   
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
                                     DSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVS

Query:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC
        KLAQDNHIYIEFHGYCCFIKDKSTGKHC
Subjt:  KLAQDNHIYIEFHGYCCFIKDKSTGKHC

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X3

6.4e-182

93.47

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
        SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X5

1.4e-133

75.28

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFE

Query:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV
        KRLKHQNTQKK              +++  +   NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLC                                   
Subjt:  KRLKHQNTQKK--------------KKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSV

Query:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
                                     DSGATNHVTRECSNMTNPTEYSG
Subjt:  SPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

A0A5A7SIT7 Uncharacterized protein

1.2e-172

83.12

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQL TVKLDRKNYLLWKTLALPILK YKLEGHLT ETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------------------------------
        VN LFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK                                
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK--------------------------------

Query:  -----GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTE----------------NQSNKKFYGYNRQHFSGQRGNLNNGPT
             GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEK LKHQNTQKKKK + + T+                N SNKKFYGYNRQHFSGQRGNLNNGPT
Subjt:  -----GLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTE----------------NQSNKKFYGYNRQHFSGQRGNLNNGPT

Query:  CQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
        CQLCGKYGHSALVCYNRFNKEFSSPLVQ+RNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG
Subjt:  CQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSG

SwissProt top hits

e value

%identity

Alignment

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

3.5e-20

25.56

Show/hide

Query:  LNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPD
        +N     KL   NYL+W      +   Y+L G L   T  P                    ATIG  ++  PR VNP + +W   D L+   +  +++  
Subjt:  LNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPD

Query:  VAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG-------------------------------------LDEVYNLVIVVIQGK---PD
        V   +   T    +W+  +  +   S      LR  L+   KG                                     L E Y  VI  I  K   P 
Subjt:  VAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG-------------------------------------LDEVYNLVIVVIQGK---PD

Query:  IS-----WLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGP--------------------TCQLCGKYGHSALVC
        ++      L+ +SK+L          T     +R   T N +N    G     +  +  N N+ P                     CQ+CG  GHSA  C
Subjt:  IS-----WLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTENQSNKKFYGYNRQHFSGQRGNLNNGP--------------------TCQLCGKYGHSALVC

Query:  YNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLT
                     Q ++  SS  S  P P+ F   Q     A        NW +DSGAT+H+T + +N++    Y+G + V V +G+ + IS+ G+T L+
Subjt:  YNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLT

Query:  DGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHGYCCFIKDKSTG
           + L L NIL VP+I KNLISV +L   N + +EF      +KD +TG
Subjt:  DGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHGYCCFIKDKSTG

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

1.3e-19

24.65

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Query:  LNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPD
        +N     KL   NYL+W      +   Y+L G L   TP P                    ATIG  +   PR VNP + +W   D L+   +  +++  
Subjt:  LNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLLLGWLYNSMTPD

Query:  VAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR------------------QMLQTTRKGLDEVYNLVIVVIQGK---PDIS-----WLDMQSKLL---
        V   +   T    +W+  +  +   S      LR                  + ++   + L + Y  VI  I  K   P ++      ++ +SKLL   
Subjt:  VAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLR------------------QMLQTTRKGLDEVYNLVIVVIQGK---PDIS-----WLDMQSKLL---

Query:  ------IFEKRLKHQNTQKKKKYRK---HHTENQSNKKFYGYNRQHFSGQRGNLNNGP---TCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGS
              I    + H+NT   +       +   N +N +   +       +  N    P    CQ+C   GHSA  C           L Q ++  +   S
Subjt:  ------IFEKRLKHQNTQKKKKYRK---HHTENQSNKKFYGYNRQHFSGQRGNLNNGP---TCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGS

Query:  VSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISV
         SP    F   Q     A        NW +DSGAT+H+T + +N++    Y+G + V + +G+ + I++ G+  L    +SL L  +L VP+I KNLISV
Subjt:  VSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISV

Query:  SKLAQDNHIYIEFHGYCCFIKDKSTG
         +L   N + +EF      +KD +TG
Subjt:  SKLAQDNHIYIEFHGYCCFIKDKSTG

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCCAACGCCCAACCTACCGCTGCTCCTCCAAGTTTATCCTCAGCAGGTTTTTCAAATCCTCCTCTAAACCAAATTTTAAATCAACTAACCACTGTGAAACTTGACAG
GAAGAACTATCTTTTGTGGAAAACCCTTGCTCTCCCCATCCTCAAAGACTACAAACTTGAGGGACATCTCACTGCAGAAACACCATGCCCGTCACACTTCGTCTTATCGG
CGTCTAGCTCAAACACTACAGTGACTGAAGAAGGAGCAGACGCAACCATCGGGGCTTCAAGTTCAATCACCCCTCGAATCGTGAATCCGTTGTTCGAGCAATGGGTGACA
ACTGATTTGCTGCTGCTTGGTTGGCTCTACAACTCCATGACACCTGATGTAGCCATTCAGTTAATGGGGTTTACAAATGTTGAGGACTTATGGGATGCAACGCAAGACTT
CTTTGGCGTTCAATCTCGAGCCGAAGAAGATTTTCTTCGTCAAATGTTGCAGACAACAAGGAAAGGCCTTGATGAAGTTTACAACCTTGTTATTGTCGTGATTCAAGGGA
AACCAGACATCTCCTGGCTGGATATGCAGTCGAAGCTTCTTATTTTTGAGAAAAGATTGAAACATCAAAATACCCAAAAAAAAAAAAAATACAGGAAACATCACACAGAA
AATCAAAGTAACAAAAAATTTTATGGTTACAACAGACAACATTTCAGTGGACAGCGAGGAAATCTCAACAATGGACCAACATGCCAATTATGTGGTAAGTATGGTCATTC
TGCTTTAGTATGTTACAACCGATTTAACAAGGAATTTTCTAGTCCTTTGGTTCAAAATAGGAATGAACATAGTTCGAATGGGTCTGTTAGTCCAAATCCAGCAGTGTTTG
TGTCAACTCAGAATGCGACACCATTTGCCACTCCTGATACAGTTGTTGATCCCAATTGGTACATAGATAGTGGAGCTACTAATCATGTTACTAGAGAATGTTCGAATATG
ACAAACCCAACTGAATATTCAGGTATTGAAAAAGTTACAGTAGGAAATGGAAATCGTTTAAATATTTCTTATGTTGGCAATACATGTTTGACTGATGGTGACAAGAGCCT
AGTTCTTAAAAATATCTTATGTGTTCCTGATATAGCAAAGAATTTGATTAGTGTTTCAAAATTAGCACAAGACAATCACATTTACATTGAGTTCCATGGTTATTGTTGCT
TTATTAAGGACAAATCTACGGGGAAACACTGTTGA

mRNA sequence

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Protein sequence

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MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVT
TDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKKKYRKHHTE
NQSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNEHSSNGSVSPNPAVFVSTQNATPFATPDTVVDPNWYIDSGATNHVTRECSNM
TNPTEYSGIEKVTVGNGNRLNISYVGNTCLTDGDKSLVLKNILCVPDIAKNLISVSKLAQDNHIYIEFHGYCCFIKDKSTGKHC

Pay0005672 (gene) of Melon (Payzawat) v1 genome