; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0005800 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0005800
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr01:17680593..17681379
RNA-Seq ExpressionPay0005800
SyntenyPay0005800
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]3.6e-8874.29Show/hide
Query:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------
        +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK                 TETDFICKNLILNGLTDELYD YSTMTTAK+        
Subjt:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------

Query:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK
                  Y VSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EG+P DDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRLRIEEEA+KHDKK
Subjt:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK

Query:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV
        EEVNAIPRKK TA LK DLKPK NKMK+  NKQNNPQS S   ++
Subjt:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]6.3e-7778.05Show/hide
Query:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-
        M GQIQ +LMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATACTTEKPK                 TETDFICKNLILNGLTDELYD YSTMTTAKE 
Subjt:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-

Query:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
                         Y VSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEG+P DDQFQV VIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
Subjt:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE

Query:  ARKHD
        ARKHD
Subjt:  ARKHD

KAA0065374.1 uncharacterized protein E6C27_scaffold17G00360 [Cucumis melo var. makuwa]1.7e-8573.98Show/hide
Query:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-
        MVGQIQ +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEK K                 TETDFICKNLILNGLTDELYD YSTMTT KE 
Subjt:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-

Query:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
                         Y VSRYLRYQMTDDKSVE QSHEIQKIAHEIISEG+P DDQFQVAVIIDKLP LWKDFKNTLRHKTKEFSLESLITRL+IEEE
Subjt:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE

Query:  ARKHDKKEEVNAIPRKKPTAFLKPDLKP--KENKMKRESNKQNNPQ
        ARKHDKKEEVNAIPRKKPTA LK DL+   K+++ + +  KQ   Q
Subjt:  ARKHDKKEEVNAIPRKKPTAFLKPDLKP--KENKMKRESNKQNNPQ

KAA0065496.1 hypothetical protein E6C27_scaffold17G002020 [Cucumis melo var. makuwa]3.5e-7578.2Show/hide
Query:  MSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKTE----TDFICKNLILNGLTDELY---DDYSTMTTA-KEYIVSRYLRYQMTDDKSVEA
        MSSDLN PFRFEGAHFKRWK++MLFFLTLKKVA ACTTEK K      T+   KNL     TD +Y     Y T     K+Y VSRYLRYQMTDDKSVEA
Subjt:  MSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKTE----TDFICKNLILNGLTDELY---DDYSTMTTA-KEYIVSRYLRYQMTDDKSVEA

Query:  QSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAFLKPDLKPKENKMKRE
        QSHEIQKIAHEIISEG+  +DQFQV VIIDKLP LWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTA LKPD KPK NKMKR 
Subjt:  QSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAFLKPDLKPKENKMKRE

Query:  SNKQNNPQSRS
        SNKQNNPQS+S
Subjt:  SNKQNNPQSRS

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]1.8e-8773.47Show/hide
Query:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------
        +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACT EKPK                 TETDFICKNLILNGLTDELYD YSTMTTAK+        
Subjt:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------

Query:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK
                  Y VSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EG+P DDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRL+IEEEA+K DKK
Subjt:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK

Query:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV
        +EVNAIPRKK TA LK DLKPK NKMK+  NKQNNPQS S   ++
Subjt:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV

TrEMBL top hitse value%identityAlignment
A0A5A7UA92 Uncharacterized protein1.7e-8874.29Show/hide
Query:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------
        +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK                 TETDFICKNLILNGLTDELYD YSTMTTAK+        
Subjt:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------

Query:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK
                  Y VSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EG+P DDQFQV +IIDKL  LWKDFKNTLRHKTKEFSLE+L TRLRIEEEA+KHDKK
Subjt:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK

Query:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV
        EEVNAIPRKK TA LK DLKPK NKMK+  NKQNNPQS S   ++
Subjt:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV

A0A5A7UYY4 Uncharacterized protein3.1e-7778.05Show/hide
Query:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-
        M GQIQ +LMSSDLNR FRFEGAHFKRWKQK+LFFLTLKKVATACTTEKPK                 TETDFICKNLILNGLTDELYD YSTMTTAKE 
Subjt:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-

Query:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
                         Y VSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEG+P DDQFQV VIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
Subjt:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE

Query:  ARKHD
        ARKHD
Subjt:  ARKHD

A0A5A7VGN8 Uncharacterized protein1.7e-7578.2Show/hide
Query:  MSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKTE----TDFICKNLILNGLTDELY---DDYSTMTTA-KEYIVSRYLRYQMTDDKSVEA
        MSSDLN PFRFEGAHFKRWK++MLFFLTLKKVA ACTTEK K      T+   KNL     TD +Y     Y T     K+Y VSRYLRYQMTDDKSVEA
Subjt:  MSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKTE----TDFICKNLILNGLTDELY---DDYSTMTTA-KEYIVSRYLRYQMTDDKSVEA

Query:  QSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAFLKPDLKPKENKMKRE
        QSHEIQKIAHEIISEG+  +DQFQV VIIDKLP LWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTA LKPD KPK NKMKR 
Subjt:  QSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAFLKPDLKPKENKMKRE

Query:  SNKQNNPQSRS
        SNKQNNPQS+S
Subjt:  SNKQNNPQSRS

A0A5D3BDS3 Uncharacterized protein8.6e-8873.47Show/hide
Query:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------
        +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACT EKPK                 TETDFICKNLILNGLTDELYD YSTMTTAK+        
Subjt:  NLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE--------

Query:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK
                  Y VSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EG+P DDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LITRL+IEEEA+K DKK
Subjt:  ----------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKK

Query:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV
        +EVNAIPRKK TA LK DLKPK NKMK+  NKQNNPQS S   ++
Subjt:  EEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIV

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein8.0e-8673.98Show/hide
Query:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-
        MVGQIQ +LMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEK K                 TETDFICKNLILNGLTDELYD YSTMTT KE 
Subjt:  MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPK-----------------TETDFICKNLILNGLTDELYDDYSTMTTAKE-

Query:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE
                         Y VSRYLRYQMTDDKSVE QSHEIQKIAHEIISEG+P DDQFQVAVIIDKLP LWKDFKNTLRHKTKEFSLESLITRL+IEEE
Subjt:  -----------------YIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEE

Query:  ARKHDKKEEVNAIPRKKPTAFLKPDLKP--KENKMKRESNKQNNPQ
        ARKHDKKEEVNAIPRKKPTA LK DL+   K+++ + +  KQ   Q
Subjt:  ARKHDKKEEVNAIPRKKPTAFLKPDLKP--KENKMKRESNKQNNPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein7.1e-1023.41Show/hide
Query:  RFEGAHFKRWKQKMLFFL------------------------TLKKVATACTTEKPKTETDFICKNLILNGLTDELYDDYSTM-----------------
        RF+G  +  W  +M  FL                          +++  A  T K     D++C   ++N L+D LY  YS                   
Subjt:  RFEGAHFKRWKQKMLFFL------------------------TLKKVATACTTEKPKTETDFICKNLILNGLTDELYDDYSTM-----------------

Query:  --TTAKEYIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEV
          + +K   V +Y+ ++M +++ +  Q     KIA  I+S G+  D+ F V+ II K PP W+ F   L  + +   +  L+ R++ EEE  ++  K   
Subjt:  --TTAKEYIVSRYLRYQMTDDKSVEAQSHEIQKIAHEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEV

Query:  NAIPRKKPTAFLKPDLKPKENKMKRESN----KQNNPQSRSTVQIVCYNCNK
          +  +  T   + +  P      R S     K+  P+    V IVC NC +
Subjt:  NAIPRKKPTAFLKPDLKPKENKMKRESN----KQNNPQSRSTVQIVCYNCNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGACAAATCCAATTCAACTTGATGTCTTCTGATCTCAACCGTCCATTCCGTTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAAATGTTATTTTTTCTCAC
ACTAAAGAAGGTGGCCACTGCTTGTACTACTGAAAAGCCGAAGACAGAAACTGACTTCATCTGTAAGAACCTAATTCTTAATGGTCTTACTGATGAACTATATGATGATT
ATAGTACCATGACTACTGCAAAAGAATACATTGTCAGCCGATACCTGAGATATCAAATGACTGATGACAAATCCGTGGAGGCACAGTCACATGAAATCCAGAAAATAGCC
CACGAGATTATCAGTGAAGGTATACCATTTGATGATCAATTTCAAGTTGCTGTTATTATTGATAAATTACCTCCACTGTGGAAGGATTTCAAGAACACCCTAAGGCACAA
AACCAAGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGGTGAATGCTATCCCTAGAAAGAAGCCCA
CTGCATTTCTAAAACCGGACCTGAAGCCGAAAGAAAACAAGATGAAACGAGAATCCAACAAACAAAACAACCCACAATCTAGAAGTACGGTACAAATTGTTTGTTATAAT
TGTAATAAGCCTGACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGACAAATCCAATTCAACTTGATGTCTTCTGATCTCAACCGTCCATTCCGTTTTGAAGGAGCACACTTCAAAAGGTGGAAACAAAAAATGTTATTTTTTCTCAC
ACTAAAGAAGGTGGCCACTGCTTGTACTACTGAAAAGCCGAAGACAGAAACTGACTTCATCTGTAAGAACCTAATTCTTAATGGTCTTACTGATGAACTATATGATGATT
ATAGTACCATGACTACTGCAAAAGAATACATTGTCAGCCGATACCTGAGATATCAAATGACTGATGACAAATCCGTGGAGGCACAGTCACATGAAATCCAGAAAATAGCC
CACGAGATTATCAGTGAAGGTATACCATTTGATGATCAATTTCAAGTTGCTGTTATTATTGATAAATTACCTCCACTGTGGAAGGATTTCAAGAACACCCTAAGGCACAA
AACCAAGGAGTTCTCACTGGAAAGTCTAATCACGAGGCTAAGGATAGAGGAGGAAGCAAGGAAGCATGATAAAAAAGAAGAGGTGAATGCTATCCCTAGAAAGAAGCCCA
CTGCATTTCTAAAACCGGACCTGAAGCCGAAAGAAAACAAGATGAAACGAGAATCCAACAAACAAAACAACCCACAATCTAGAAGTACGGTACAAATTGTTTGTTATAAT
TGTAATAAGCCTGACATTTAG
Protein sequenceShow/hide protein sequence
MVGQIQFNLMSSDLNRPFRFEGAHFKRWKQKMLFFLTLKKVATACTTEKPKTETDFICKNLILNGLTDELYDDYSTMTTAKEYIVSRYLRYQMTDDKSVEAQSHEIQKIA
HEIISEGIPFDDQFQVAVIIDKLPPLWKDFKNTLRHKTKEFSLESLITRLRIEEEARKHDKKEEVNAIPRKKPTAFLKPDLKPKENKMKRESNKQNNPQSRSTVQIVCYN
CNKPDI