; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0005824 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0005824
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description50S ribosomal protein L35
Genome locationchr02:13062128..13064325
RNA-Seq ExpressionPay0005824
SyntenyPay0005824
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035109.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]1.3e-7099.31Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK

XP_004146668.1 50S ribosomal protein L35, chloroplastic [Cucumis sativus]1.7e-7095.36Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQKPSHISPTSQI TPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLL KKNAKRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_008443834.1 PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]3.9e-75100Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]5.5e-6185.53Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAS  VSFGLRFSPLCSRPS RVSH SV LA SFNKVNSL+L SS NISGFG+  LQK  HI+PTSQ+HTP TV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

XP_038878434.1 50S ribosomal protein L35, chloroplastic [Benincasa hispida]3.0e-6792.05Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVS GLRFSPL SRPS RVSH+SVGLASFNK NSLKLSSS+NISGFG+ FLQKPSHISPT QIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

TrEMBL top hitse value%identityAlignment
A0A0A0LYX0 50S ribosomal protein L358.3e-7195.36Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVG+AS NKVNSLKLSSSHNISGFG N LQKPSHISPTSQI TPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLL KKNAKRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A1S3B9R8 50S ribosomal protein L351.9e-75100Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A5D3B7R7 50S ribosomal protein L356.4e-7199.31Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQK SHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
        IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLK

A0A6J1C550 50S ribosomal protein L352.7e-6185.53Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAS  VSFGLRFSPLCSRPS RVSH SV LA SFNKVNSL+L SS NISGFG+  LQK  HI+PTSQ+HTP TV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLA-SFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1JDG6 50S ribosomal protein L358.6e-6082.78Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS +VSFGLRFSPLCSR S RVS  SV L S NK  SL+LSSSHN+S FG+  LQKP HI+P+S+IHTPFTV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ

SwissProt top hitse value%identityAlignment
P23326 50S ribosomal protein L35, chloroplastic2.5e-3260.62Show/hide
Query:  MASASMAVSF---GLRFSPLCSRPSFRVSHT-SVGLASFNK--VNSLKLSSSHNISGFGLN-FLQKPSHISPT-SQIHT---PFTVFAAKGYKMKTHKAS
        MASA+  +SF    L  SP    PS R S    + L  FNK   ++L LSSS +IS   +   + K   IS   S + T    FTVFAAKGYKMKTHKAS
Subjt:  MASASMAVSF---GLRFSPLCSRPSFRVSHT-SVGLASFNK--VNSLKLSSSHNISGFGLN-FLQKPSHISPT-SQIHT---PFTVFAAKGYKMKTHKAS

Query:  AKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQ
        AKRFRVTG+GKIVRRRAGKQHLL KKN KR+ RLSKL  V RSDYDNVIGALPYLKVNR+
Subjt:  AKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQ

Q31NR1 50S ribosomal protein L353.9e-0954.84Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY
        K+KT KA+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   LPY
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY

Q5N5F4 50S ribosomal protein L353.9e-0954.84Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY
        K+KT KA+AKRFR++G GK +RR+A K HLL  KNA RR RLS+   V  +D + V   LPY
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPY

Q8VZ55 50S ribosomal protein L35, chloroplastic2.3e-3363.16Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGR
        MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K S + SP SQ    FTVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L358.7e-0953.97Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K   ++ + SK+  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L351.6e-3463.16Show/hide
Query:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGR
        MAS SMA S  + F       S +VS  +SV  A+        LSSSH+ISG       K S + SP SQ    FTVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSPLCSRPSFRVS-HTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHI-SPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSK+  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTCAACAA
GGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCCATCTCACATTTCTCCCACTTCTCAAATTCATACTCCTTTTA
CTGTCTTCGCTGCTAAAGGCTACAAAATGAAAACACACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGCAGCAT
TTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTCTCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAGGTGAA
TAGGCAGGCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
AAGCTATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTCTCCCCACTCTGCTCTCGCCCATCATTTCGCGTCTCTCATACTTCCGTCGGGCTTGCTTCTTTC
AACAAGGTCAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTTTGGACTCAATTTCCTTCAGAAGCCATCTCACATTTCTCCCACTTCTCAAATTCATACTCC
TTTTACTGTCTTCGCTGCTAAAGGCTACAAAATGAAAACACACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATCGTTCGGAGGAGAGCTGGAAAGC
AGCATTTGCTGTACAAGAAGAACGCAAAGAGGAGATTACGCCTCTCCAAACTGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACTTGAAG
GTGAATAGGCAGGCCCAGTAGAAGTGATCTTGGGATCTTGCCTGTACTTAACTTCATTTTGTAACCAAATGATTTTCAATTTTCCAGAACTCATCAAAGGGCACAAGTTT
GATTGCTTAAAAATATTATTTGTTCTATTTATTCCCTCAGTTGATAATGGTACCTACAACCTTCTTTCAGTTCCTTTCCTCTATTGTTGGCTACAAAATGCAGCTTATTT
CTTCTGTAAATTATGAGTACCTTAGAGGGTTCTTTTGCCCATATGGAAAATATCTGGTTTGTTTGCTTA
Protein sequenceShow/hide protein sequence
MASASMAVSFGLRFSPLCSRPSFRVSHTSVGLASFNKVNSLKLSSSHNISGFGLNFLQKPSHISPTSQIHTPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQH
LLYKKNAKRRLRLSKLHPVSRSDYDNVIGALPYLKVNRQAQ