| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0051794.1 uncharacterized protein E6C27_scaffold60G002030 [Cucumis melo var. makuwa] | 1.5e-53 | 36.69 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW-----VIISDS---ESEDD-------VETAPVSSDEYGVG-FVDVLKQKA
MDVKS FLNGY++EEVY+AQPKGF+D P +VYKL+KALYGLKQAPRAW + + + + E D T +SS E G + ++
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW-----VIISDS---ESEDD-------VETAPVSSDEYGVG-FVDVLKQKA
Query: ISVKRFSPSGKFPSSL-QVP------RSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVP------DVTTH
+ S S PS+ VP RS + P D++ D+ + V+ + TVD A QE P P S P ++T
Subjt: ISVKRFSPSGKFPSSL-QVP------RSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVP------DVTTH
Query: AP--------SSVPIDEISFHSKDYVHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVH
A SV ID ISF+ ++ V W VV+ RIAD+ IS++H S+VG FYP+ ++EFIVN PA ND SP+YQ VH
Subjt: AP--------SSVPIDEISFHSKDYVHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVH
Query: VRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGV
+RG F ISPT+IN L S P + + L + + L + W P++H S VS TL L+ I K+D G FI+ +LRHV +FGV
Subjt: VRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGV
Query: NVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
+PI P+ + LL + VLT D P +T++LSY+LFQGS++
Subjt: NVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| KAA0063048.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.9e-14 | 80 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDVKSAFLNGY+S EVY+ QPKGF+D VH +HVYKL KALYGLKQA RAW
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| KAA0063048.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.8e-51 | 32.22 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWV-----------------------IISDSESEDDVETAPVSSDEYGVGFV
MDVKSAFLNGY+SEEVY+AQPKGF+DPVH +HVYKL KALYGLK+APR W I ++ + D T+ + S ++ + ++
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWV-----------------------IISDSESEDDVETAPVSSDEYGVGFV
Query: DVLKQKAISVKRFSPSG----------------KFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAP-----PTVDSFSGSTL----------SQT
S R S SG K+PS + SS+ + E ++ P SS PT + + S
Subjt: DVLKQKAISVKRFSPSG----------------KFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAP-----PTVDSFSGSTL----------SQT
Query: TAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYV------HKWNFVVK--------------LRIADEAVISNQHRS----------SVGH
+ F P SS + P V+ +V +D S S+D V H+ V + + + S+ H S G
Subjt: TAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYV------HKWNFVVK--------------LRIADEAVISNQHRS----------SVGH
Query: F-YPKFIREFIVN--------------LPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIH
F P + E + + P L+D + EYQKVH+RG CF +SP L+N +L SLP+DY+V P PE+L +L+ G+V WP DG P+
Subjt: F-YPKFIREFIVN--------------LPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIH
Query: ------------------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLS
P+ + SI+ST L + ++L+GTG K++VG+FIF H+L+HV+TF +++PI FP +L FLL+Q +LT D G + R I LS
Subjt: ------------------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLS
Query: YKLFQGSHL
LFQG+H+
Subjt: YKLFQGSHL
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| TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.6e-53 | 38.82 | Show/hide |
Query: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
SP PS + +D+ +D + ++P E +S + +F S + +EP T A P +VP VPID +SFHS++
Subjt: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
Query: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
HKWN+VVK RIADEA I +Q+ S VG FYP+ +RE IVNLP+D ND + EYQKVH+RG F +SP L+N +L SLP+DY
Subjt: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
Query: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
+V+ P PE+L +L+ G++ WP DG Y +H P+TH +ST+L + ++L+GTG K++ +FIF H+LRHVDTF +++PI FP
Subjt: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
Query: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
++L FLL+Q LT D G R I L LFQGS++
Subjt: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.9e-14 | 80 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDVKSAFLNGY+S EVY+ QPKGF+D VH +HVYKL KALYGLKQA RAW
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| TYK16303.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.8e-52 | 38.53 | Show/hide |
Query: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
SP PS + +D+ +D + ++P E +S + +F S + +EP T A P +VP VPID +SFHS++
Subjt: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
Query: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
HKWN+VVK RIADEA I +Q+ S VG FYP+ +RE IVNLP+D ND + EYQKVH+RG F +SP L+N +L SLP+DY
Subjt: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
Query: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
+V+ P PE+L +L+ G++ WP DG Y +H P+TH + T+L + ++L+GTG K++ +FIF H+LRHVDTF +++PI FP
Subjt: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
Query: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
++L FLL+Q LT D G R I L LFQGS++
Subjt: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| XP_008458113.1 PREDICTED: uncharacterized protein LOC103497643 [Cucumis melo] | 2.9e-243 | 93.51 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVSSDEYGVGFVDVLKQKAISVKRFSPSGKFPSSL
MDVKSAFLNGY+SEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVS DEYGV VDVLKQKAISVKRFSPS KFPSSL
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVSSDEYGVGFVDVLKQKAISVKRFSPSGKFPSSL
Query: QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYVHKWNFVVKLRI
QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKD VHKWNFVVKLRI
Subjt: QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYVHKWNFVVKLRI
Query: ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPI
ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLP+DYSVTLPLPEQLTL+LSSGSVRQWPCDGYFPI
Subjt: ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPI
Query: ------------------HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISL
HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVP FFPQLLCAFLLSQHPKVLTYEDIQ PT RTISL
Subjt: ------------------HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISL
Query: SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQILFESFESSKSAPAS
SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQIL ESFESSKSAPAS
Subjt: SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQILFESFESSKSAPAS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C780 uncharacterized protein LOC103497643 | 1.4e-243 | 93.51 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVSSDEYGVGFVDVLKQKAISVKRFSPSGKFPSSL
MDVKSAFLNGY+SEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVS DEYGV VDVLKQKAISVKRFSPS KFPSSL
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDSESEDDVETAPVSSDEYGVGFVDVLKQKAISVKRFSPSGKFPSSL
Query: QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYVHKWNFVVKLRI
QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKD VHKWNFVVKLRI
Subjt: QVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYVHKWNFVVKLRI
Query: ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPI
ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLP+DYSVTLPLPEQLTL+LSSGSVRQWPCDGYFPI
Subjt: ADEAVISNQHRSSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPI
Query: ------------------HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISL
HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVP FFPQLLCAFLLSQHPKVLTYEDIQ PT RTISL
Subjt: ------------------HPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISL
Query: SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQILFESFESSKSAPAS
SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQIL ESFESSKSAPAS
Subjt: SYKLFQGSHLLSDELRSLSVAILDLDELIGGLTSRRVAVDIVIHVVQILFESFESSKSAPAS
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| A0A5A7U8Y1 Reverse transcriptase Ty1/copia-type domain-containing protein | 7.1e-54 | 36.69 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW-----VIISDS---ESEDD-------VETAPVSSDEYGVG-FVDVLKQKA
MDVKS FLNGY++EEVY+AQPKGF+D P +VYKL+KALYGLKQAPRAW + + + + E D T +SS E G + ++
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW-----VIISDS---ESEDD-------VETAPVSSDEYGVG-FVDVLKQKA
Query: ISVKRFSPSGKFPSSL-QVP------RSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVP------DVTTH
+ S S PS+ VP RS + P D++ D+ + V+ + TVD A QE P P S P ++T
Subjt: ISVKRFSPSGKFPSSL-QVP------RSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSHPTDVP------DVTTH
Query: AP--------SSVPIDEISFHSKDYVHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVH
A SV ID ISF+ ++ V W VV+ RIAD+ IS++H S+VG FYP+ ++EFIVN PA ND SP+YQ VH
Subjt: AP--------SSVPIDEISFHSKDYVHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVH
Query: VRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGV
+RG F ISPT+IN L S P + + L + + L + W P++H S VS TL L+ I K+D G FI+ +LRHV +FGV
Subjt: VRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIHPTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGV
Query: NVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
+PI P+ + LL + VLT D P +T++LSY+LFQGS++
Subjt: NVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| A0A5A7V603 Gag-pol polyprotein | 1.9e-14 | 80 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDVKSAFLNGY+S EVY+ QPKGF+D VH +HVYKL KALYGLKQA RAW
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| A0A5A7V603 Gag-pol polyprotein | 3.3e-51 | 32.22 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWV-----------------------IISDSESEDDVETAPVSSDEYGVGFV
MDVKSAFLNGY+SEEVY+AQPKGF+DPVH +HVYKL KALYGLK+APR W I ++ + D T+ + S ++ + ++
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWV-----------------------IISDSESEDDVETAPVSSDEYGVGFV
Query: DVLKQKAISVKRFSPSG----------------KFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAP-----PTVDSFSGSTL----------SQT
S R S SG K+PS + SS+ + E ++ P SS PT + + S
Subjt: DVLKQKAISVKRFSPSG----------------KFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAP-----PTVDSFSGSTL----------SQT
Query: TAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYV------HKWNFVVK--------------LRIADEAVISNQHRS----------SVGH
+ F P SS + P V+ +V +D S S+D V H+ V + + + S+ H S G
Subjt: TAAQEPPFFTPASSHPTDVPDVTTHAPSSVPIDEISFHSKDYV------HKWNFVVK--------------LRIADEAVISNQHRS----------SVGH
Query: F-YPKFIREFIVN--------------LPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIH
F P + E + + P L+D + EYQKVH+RG CF +SP L+N +L SLP+DY+V P PE+L +L+ G+V WP DG P+
Subjt: F-YPKFIREFIVN--------------LPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDYSVTLPLPEQLTLQLSSGSVRQWPCDGYFPIH
Query: ------------------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLS
P+ + SI+ST L + ++L+GTG K++VG+FIF H+L+HV+TF +++PI FP +L FLL+Q +LT D G + R I LS
Subjt: ------------------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFPQLLCAFLLSQHPKVLTYEDIQGPTLRTISLS
Query: YKLFQGSHL
LFQG+H+
Subjt: YKLFQGSHL
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| A0A5D3CWQ1 Gag-pol polyprotein | 2.7e-53 | 38.82 | Show/hide |
Query: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
SP PS + +D+ +D + ++P E +S + +F S + +EP T A P +VP VPID +SFHS++
Subjt: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
Query: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
HKWN+VVK RIADEA I +Q+ S VG FYP+ +RE IVNLP+D ND + EYQKVH+RG F +SP L+N +L SLP+DY
Subjt: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
Query: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
+V+ P PE+L +L+ G++ WP DG Y +H P+TH +ST+L + ++L+GTG K++ +FIF H+LRHVDTF +++PI FP
Subjt: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
Query: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
++L FLL+Q LT D G R I L LFQGS++
Subjt: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| A0A5D3CWQ1 Gag-pol polyprotein | 1.9e-14 | 80 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDVKSAFLNGY+S EVY+ QPKGF+D VH +HVYKL KALYGLKQA RAW
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| A0A5D3CWQ1 Gag-pol polyprotein | 1.3e-52 | 38.53 | Show/hide |
Query: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
SP PS + +D+ +D + ++P E +S + +F S + +EP T A P +VP VPID +SFHS++
Subjt: SPSGKFPSSLQVPRSSDEPIDDLFDEFQHVSIPHGEESSYAPPTVDSFSGSTLSQTTAAQEPPFFTPASSH--PTDVPDVTTHAPSSVPIDEISFHSKDY
Query: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
HKWN+VVK RIADEA I +Q+ S VG FYP+ +RE IVNLP+D ND + EYQKVH+RG F +SP L+N +L SLP+DY
Subjt: VHKWNFVVKLRIADEAVISNQHR------------------SSVGHFYPKFIREFIVNLPADLNDHGSPEYQKVHVRGKCFEISPTLINRFLKHSLPSDY
Query: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
+V+ P PE+L +L+ G++ WP DG Y +H P+TH + T+L + ++L+GTG K++ +FIF H+LRHVDTF +++PI FP
Subjt: SVTLPLPEQLTLQLSSGSVRQWPCDG----------YFPIH--------PTTHLSIVSTTLVNSLFLIGTGSKIDVGDFIFKHVLRHVDTFGVNVPIFFP
Query: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
++L FLL+Q LT D G R I L LFQGS++
Subjt: QLLCAFLLSQHPKVLTYEDIQGPTLRTISLSYKLFQGSHL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-07 | 54 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDVK+AFLNG + EE+Y+ P+G + ++V KL+KA+YGLKQA R W
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.9e-09 | 53.57 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDS
+DVK+AFL+G + EE+Y+ QP+GF + V KL+K+LYGLKQAPR W + DS
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVIISDS
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.6e-08 | 48 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
MDV +AFLN + E +Y+ QP GF++ +P++V++L+ +YGLKQAP W
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-12 | 61.54 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVI
+DV +AFL G ++++VY++QP GFID PN+V KL KALYGLKQAPRAW +
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-11 | 55.77 | Show/hide |
Query: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVI
+DV +AFL G +++EVY++QP GF+D P++V +L KA+YGLKQAPRAW +
Subjt: MDVKSAFLNGYISEEVYIAQPKGFIDPVHPNHVYKLHKALYGLKQAPRAWVI
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