; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0005873 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0005873
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr01:35665902..35668253
RNA-Seq ExpressionPay0005873
SyntenyPay0005873
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]7.0e-24073.63Show/hide
Query:  TIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS------------------------------------------------------------
        TIAGLTSTEVVDVEEMVAMFLHILAHDVK+RVI+REFMRS                                                            
Subjt:  TIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS------------------------------------------------------------

Query:  ---------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF
                                                                 GYYYLVD GYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF
Subjt:  ---------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF

Query:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM
        FNMKH SARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM
Subjt:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM

Query:  TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCIV
        TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCIV
Subjt:  TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCIV

Query:  AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV
        AEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV
Subjt:  AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV

Query:  SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ
        SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ
Subjt:  SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ

Query:  ENQ
        ENQ
Subjt:  ENQ

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]4.0e-21166.45Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS----------------------------------------------
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS                                              
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS----------------------------------------------

Query:  -----------------------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQE
                                                                               GYYYLVDAGYPNAEGFLAPYRGQRYHLQE
Subjt:  -----------------------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQE

Query:  WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
        WRGP+NAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSY+PVEVQC TILACCLLHNLINREMTNFDIEDNI                      
Subjt:  WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA----------------------------------
                     MTSSSRLPKHTWTKEEEAG    LVELVNAGGWRSDNGTFRPGYLNQLARMMA                                  
Subjt:  EWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA----------------------------------

Query:  --GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL
          GFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSN+PPGYDA AADA+PDTDF PMYS GLNMSPDDL
Subjt:  --GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL

Query:  METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEV
        METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIV+ LEAIPELTLMDRCRLMRILMRNVDDMKAFLEV
Subjt:  METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEV

Query:  PDHMKYPYCSLILQENQ
        PD+MKYPYCS+ILQEN+
Subjt:  PDHMKYPYCSLILQENQ

KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-14487.17Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

KAA0038122.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-14587.5Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

KAA0057083.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-14487.17Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.9e-21166.45Show/hide
Query:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS----------------------------------------------
        MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS                                              
Subjt:  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS----------------------------------------------

Query:  -----------------------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQE
                                                                               GYYYLVDAGYPNAEGFLAPYRGQRYHLQE
Subjt:  -----------------------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQE

Query:  WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN
        WRGP+NAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSY+PVEVQC TILACCLLHNLINREMTNFDIEDNI                      
Subjt:  WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSN

Query:  EWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA----------------------------------
                     MTSSSRLPKHTWTKEEEAG    LVELVNAGGWRSDNGTFRPGYLNQLARMMA                                  
Subjt:  EWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA----------------------------------

Query:  --GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL
          GFGWNDEKKCIVAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSN+PPGYDA AADA+PDTDF PMYS GLNMSPDDL
Subjt:  --GFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL

Query:  METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEV
        METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIV+ LEAIPELTLMDRCRLMRILMRNVDDMKAFLEV
Subjt:  METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEV

Query:  PDHMKYPYCSLILQENQ
        PD+MKYPYCS+ILQEN+
Subjt:  PDHMKYPYCSLILQENQ

A0A5A7UME4 Retrotransposon protein1.2e-14487.17Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

A0A5D3CBF7 Retrotransposon protein1.4e-14587.5Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

A0A5D3DPR5 Retrotransposon protein1.6e-14487.17Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI
        MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCI
Subjt:  MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCI

Query:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
        VAEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDA AADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN
Subjt:  VAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN

Query:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
        VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL
Subjt:  VSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLIL

Query:  QENQ
        QENQ
Subjt:  QENQ

E5GCB5 Retrotransposon protein3.4e-24073.63Show/hide
Query:  TIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS------------------------------------------------------------
        TIAGLTSTEVVDVEEMVAMFLHILAHDVK+RVI+REFMRS                                                            
Subjt:  TIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS------------------------------------------------------------

Query:  ---------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF
                                                                 GYYYLVD GYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF
Subjt:  ---------------------------------------------------------GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEF

Query:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM
        FNMKH SARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM
Subjt:  FNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIM

Query:  TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCIV
        TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA                                    GFGWNDEKKCIV
Subjt:  TSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMA------------------------------------GFGWNDEKKCIV

Query:  AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV
        AEKEVFDDW  SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV
Subjt:  AEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNV

Query:  SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ
        SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ
Subjt:  SSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQ

Query:  ENQ
        ENQ
Subjt:  ENQ

SwissProt top hitse value%identityAlignment
Q17QR8 Putative nuclease HARBI11.8e-0437.84Show/hide
Query:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        + L+ W   P + P T  E+ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Q96MB7 Putative nuclease HARBI11.8e-0437.84Show/hide
Query:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL
        + L+ W   P + P T  E+ +NM HS+  +VIE+ F  L  R+  L   +G   Y  E     ILACC+LHN+
Subjt:  YHLQEW-RGPENAPSTSKEF-FNMKHSSARNVIERAFGVLKGRWAIL---RGKSYYPVEVQCRTILACCLLHNL

Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.4e-0737.97Show/hide
Query:  LARMMAGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAG
        L R  +GFGW+ E K   A  EV+ D++K+HP  K +  +S  H+++L  +FG   ATG  A   +D  S  P  Y  G
Subjt:  LARMMAGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAG

AT1G43722.1 unknown protein6.5e-1049.28Show/hide
Query:  YYLVDAGYPNAEGFLAPYRGQ-----RYHL-QEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGR
        YYLVD+GYPN +G LAPYR       RYH+ Q + GP   P    E FN  H+S R+VIER F + K +
Subjt:  YYLVDAGYPNAEGFLAPYRGQ-----RYHL-QEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGR

AT4G10890.1 unknown protein1.0e-1047.76Show/hide
Query:  YYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL
        YYLV++ YP   G+L P+R   YHL ++ G    P T +E FN KH   R+VI+R FGV K +W IL
Subjt:  YYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.6e-2232.12Show/hide
Query:  MFLHIL------AHDVKNRVIQREFMRSGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGK
        +F+++L      AHD  +RV+     +   +YLVD G+ N   FLAP+RG RYHLQE+ G    P T  E FN++H S RNVIER FG+ K R+AI +  
Subjt:  MFLHIL------AHDVKNRVIQREFMRSGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGK

Query:  SYYPVEVQCRTILACCLLHNLINREMTNFDIE---------DNIDEVDSTHATTAADDIHYIETSNE----WSQWRDNLAEEIMTSSSRLPKH
          +  + Q   +L C  LHN + +E  + + +         D ++   +   T   D+   +E   +     + WR ++AE++   ++ L  H
Subjt:  SYYPVEVQCRTILACCLLHNLINREMTNFDIE---------DNIDEVDSTHATTAADDIHYIETSNE----WSQWRDNLAEEIMTSSSRLPKH

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.3e-1439.18Show/hide
Query:  GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE
        G YY+VD  YPN  GF+APY G            N+   +KE FN +H      I R FG LK R+ IL     YP++ Q + ++A C LHN +  E
Subjt:  GYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACAT
TCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGCTATTACTACTTGGTTGATGCCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCAT
ACAGAGGCCAACGCTATCACTTACAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAACATTCTTCTGCTCGTAATGTAATCGAA
AGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCGCATGTTGTCTCCTCCACAACCT
TATCAATAGGGAGATGACGAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATACATTACATAGAGACGTCGAATG
AGTGGAGTCAATGGAGGGACAACCTTGCAGAAGAAATCATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTC
GTGGAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAATGGGACCTTTCGTCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCTGGTTTTGGGTGGAATGATGAAAA
AAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACG
TGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCAGGAGCTGCTGATGCTATGCCAGATACG
GACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCG
GAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAG
ATGCTACCCAAACACGTCAAGAGATTGTTCGACATTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGAC
ATGAAAGCTTTCCTTGAAGTTCCCGACCATATGAAGTACCCGTACTGCAGCCTCATTCTTCAAGAAAACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGAAGATGTTTCGCCATTCTGTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACAT
TCTTGCGCACGATGTGAAAAATCGTGTCATTCAACGAGAGTTCATGCGGTCGGGCTATTACTACTTGGTTGATGCCGGGTACCCAAATGCGGAGGGTTTCCTGGCACCAT
ACAGAGGCCAACGCTATCACTTACAAGAATGGCGTGGCCCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTCAATATGAAACATTCTTCTGCTCGTAATGTAATCGAA
AGAGCATTCGGTGTCTTGAAGGGTCGATGGGCGATACTGCGGGGAAAGTCATACTATCCTGTAGAAGTTCAATGTCGCACAATACTCGCATGTTGTCTCCTCCACAACCT
TATCAATAGGGAGATGACGAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACCCACGCGACTACTGCCGCGGATGACATACATTACATAGAGACGTCGAATG
AGTGGAGTCAATGGAGGGACAACCTTGCAGAAGAAATCATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGAGTGCCTC
GTGGAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAATGGGACCTTTCGTCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCTGGTTTTGGGTGGAATGATGAAAA
AAAATGCATCGTCGCTGAGAAAGAAGTCTTTGACGATTGGGTAAAGAGTCATCCGGCGGCGAAAGGCCTCCTTAATAAGTCGTTTGTCCACTATGACGAACTGTCGTACG
TGTTTGGCAAAGATCGTGCAACAGGAGGTCGGGCTGAGAGTTTTGCGGACATTGGGTCAAACGATCCTCCTGGGTATGACGCAGGAGCTGCTGATGCTATGCCAGATACG
GACTTTCCGCCAATGTACAGTCCGGGATTGAACATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCG
GAAACGTCCAGGACATGCCACAGATAGTGGGGACATAGTTCGTACTGCCATTGAGTATGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAG
ATGCTACCCAAACACGTCAAGAGATTGTTCGACATTTGGAGGCCATCCCTGAGCTCACATTGATGGATAGGTGTCGCTTAATGCGTATACTTATGCGTAACGTCGATGAC
ATGAAAGCTTTCCTTGAAGTTCCCGACCATATGAAGTACCCGTACTGCAGCCTCATTCTTCAAGAAAACCAATGA
Protein sequenceShow/hide protein sequence
MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIE
RAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEEEAGLVECL
VELVNAGGWRSDNGTFRPGYLNQLARMMAGFGWNDEKKCIVAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDT
DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDD
MKAFLEVPDHMKYPYCSLILQENQ