; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0005877 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0005877
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:23303307..23304935
RNA-Seq ExpressionPay0005877
SyntenyPay0005877
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037441.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-28694.65Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-27794.5Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWE+ISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIK QYGGPAQTFSLY KPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDLEPESIDNWEQLERDFLNRFYSTR IVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSN
        LAREKKIELDIDEVAQTNH AIEMTSN
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSN

KAA0060505.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.2e-28292.99Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.6e-28895.2Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TYK14887.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-28995.39Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

TrEMBL top hitse value%identityAlignment
A0A5A7T777 Ty3-gypsy retrotransposon protein1.2e-28694.65Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIES DAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPP FQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQF+RTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSIANRGAKDFLI KSRSDKNE DDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5A7URH1 Ty3-gypsy retrotransposon protein1.4e-27794.5Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWE+ISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIK QYGGPAQTFSLY KPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFI+TCETAGTRGDLLVKQFVRTLKGNA DWYIDLEPESIDNWEQLERDFLNRFYSTR IVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSN
        LAREKKIELDIDEVAQTNH AIEMTSN
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSN

A0A5A7V3R7 Ty3-gypsy retrotransposon protein1.1e-28292.99Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKR NT SRSREIQS ED PPFEVAKNIWEQISKPPKGGIVIKENPA+DEH S S+ S+E++P PNIMSVMVTNVDTSENRM ELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        +KVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIA+SIKTQYGGPAQTFSLYSKPYTKRI NL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFV+TLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG KPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKI NSVIKE MV 
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGD+KRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQ GKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNV PLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3BX77 Retrotransposon gag protein2.2e-28895.2Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALS IGKRPNT S SREIQS EDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFD Y+DLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNEL+DTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPF DSDVADMLEQLLENQLIQLP+CKRP+QA KVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIEL+IDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

A0A5D3CSH0 Ty3-gypsy retrotransposon protein9.1e-29095.39Show/hide
Query:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE
        MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKEN A+DEH S S+ S+EE+P PNIMSVMVTNVDTSENRMAELE
Subjt:  MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELE

Query:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
        KKVNMLM             KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQN TSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL
Subjt:  KKVNMLM-------------KNHIESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNL

Query:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
        RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE
Subjt:  RMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGE

Query:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
        LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQ IKPRTFEELATRAHDMELSI NRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV
Subjt:  LVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVV

Query:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
        HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK
Subjt:  HATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILK

Query:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
        LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI
Subjt:  LAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGAATCAC
ATTGAAAGTCGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGC
ATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGA
TCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGTGAAACT
GCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCA
ACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCA
ACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGA
ATAAAACCTCGCACGTTTGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAA
GAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTCCTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTG
AAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTA
GAGAACCAACTTATTCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAA
GTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAA
ATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGTGACATCGGCAAACGGCCAAACACCCGTAGCCGCTCAAGGGAGATTCAGTCATCTGAAGATATGCCTCCTTTTGA
AGTTGCAAAGAATATTTGGGAGCAAATCTCTAAGCCACCAAAAGGTGGAATTGTAATCAAAGAGAATCCTGCGGTTGATGAACACAACTCGTTGTCTGAGTGCTCAAACG
AGGAGGTTCCACAGCCAAATATAATGTCAGTTATGGTAACTAACGTGGATACAAGTGAAAATAGAATGGCAGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGAATCAC
ATTGAAAGTCGTGATGCTGCTGAATCAAGTCATAAACATACTGTCAAGAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGC
ATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAGCTCCATCAAAACGCAATATGGTGGACCTGCTCAAACTTTCTCCTTGTACTCCAAACCATATACGAAGAGGA
TCGACAATCTCAGAATGCCGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGCTCACTTCATCGAAACATGTGAAACT
GCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCA
ACTTGAGAGGGACTTTCTCAACCGTTTCTATAGCACCCGACGTATCGTCAGCATGATGGAGTTGACAAACACAAGACAACAAAAGGGAGAACTAGTCATCGACTACATCA
ACCGATGGAGAGCTCTGAGTCTTGACTGTAAGGATCGACTCACCGAACTGTCTGCAGTGGAGATGTGCACCCAAGGCATGCATTGGGGACTTCTTTATATTTTACAGGGA
ATAAAACCTCGCACGTTTGAAGAGTTGGCGACTCGTGCCCATGATATGGAATTGAGTATCGCCAATAGAGGAGCAAAAGATTTCTTGATTCCAAAATCGAGGAGTGACAA
GAATGAACTTGATGACACTAAAAAGATTGCAAATAGTGTCATAAAAGAGTCAATGGTTGTTCATGCAACTCCTTTGAAATCTTTCTCTAAAAGAAAAGAAACAAAAATTG
AAAGAAAGCATGATGGCGATGAAAAGCGACAGTCAACTCTTAAAGAAAGACAGGAAAAAGTTTATCCATTTCCTGACTCTGATGTTGCAGACATGTTAGAGCAGTTGCTA
GAGAACCAACTTATTCAACTGCCAGAATGCAAACGACCAGAACAAGCAGGAAAAGTAGATGATCCTAACTACTGCAAGTATCATCGGGTCATTAGTCACCCTGTTGAAAA
GTGTTTCGTGTTGAAAGAGCTAATTCTAAAGTTGGCTCGTGAAAAGAAGATCGAGCTAGATATTGATGAAGTAGCTCAGACGAATCATGTTGCGATCGAGATGACTTCAA
ATGTTCCGCCATTAACACAACTTGATGATCAAAGAAAAAGCTTGATTTAA
Protein sequenceShow/hide protein sequence
MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENPAVDEHNSLSECSNEEVPQPNIMSVMVTNVDTSENRMAELEKKVNMLMKNH
IESRDAAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCET
AGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQG
IKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELDDTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSDVADMLEQLL
ENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKIELDIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLI