; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006033 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006033
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationchr11:25865032..25878344
RNA-Seq ExpressionPay0006033
SyntenyPay0006033
Gene Ontology termsGO:0016197 - endosomal transport (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]2.5e-7798.71Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        MKSS GQSRPDLPVPPNRGKFQSDTERLSADVGGLE SLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]7.6e-7494.84Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M+SSSGQSRPDLPV PNR KFQS+TERL+ADVGGLEASLLQMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
         TTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]3.9e-7090.97Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M S SGQSR  LP P NRGKFQS+ ERLSADVGGLEASL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]1.9e-6990.32Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M S SGQSR  LP P NRGKFQS+ ERLSADVGGLE SL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]9.3e-7292.26Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M SSSG SRPDLPV PNRGKFQS+TE L+A+VGGLEASLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDLL D VNGGVQ+SFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 11.2e-7798.71Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        MKSS GQSRPDLPVPPNRGKFQSDTERLSADVGGLE SLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 16.8e-6085.33Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        MKSS GQSRPDLPVPPNRGKFQSDTERLSADVGGLE SLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH
        ATTIARFTKQTDQWLAATHALNTAVK  G  +  +  +  +  SI   +H
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 12.7e-6483.87Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M S SG SRP LPV  NRG  QS+TERLS++ GGLEASLLQMV DHQ+ASLKLR++SEKAKKDAIQKAVRVSDLLV  VNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A TI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 11.9e-7090.97Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M S SGQSR  LP P NRGKFQS+ ERLSADVGGLEASL QMV+DHQYASLKLRENSEKAKKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 11.5e-6788.39Show/hide
Query:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL
        M S SGQSR   P   NRGKFQS+ ERLSADVGGLEASL QMV+DHQYASLKLRENSEKAKKDAIQKA+RVSDLLVD VNGGVQ SFVNQKLIELEIRAL
Subjt:  MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 13.4e-4059.85Show/hide
Query:  DTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        + E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV  VNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  DTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

O55102 Biogenesis of lysosome-related organelles complex 1 subunit 11.6e-1836.21Show/hide
Query:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 11.6e-1833.57Show/hide
Query:  PPNRGKFQSDTERLSADVGGLE---ASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQT
        P +RG+  S   R    V   +     L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT
Subjt:  PPNRGKFQSDTERLSADVGGLE---ASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQT

Query:  DQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ
         QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Subjt:  DQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 13.9e-2039.66Show/hide
Query:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++ L T  A+F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 11.6e-1836.21Show/hide
Query:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++ L    A+F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein2.4e-4159.85Show/hide
Query:  DTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT
        + E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV  VNGGV+E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+
Subjt:  DTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCGTCGGGGCAATCACGGCCGGACCTCCCCGTACCGCCTAATCGCGGCAAGTTTCAATCGGACACGGAGAGATTGAGCGCTGATGTAGGTGGATTGGAAGC
TTCATTGCTTCAGATGGTCAGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAACTCTGAGAAGGCGAAGAAAGATGCCATACAGAAGGCGGTACGCGTTTCGGATC
TTTTAGTCGATACCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAA
ACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTTGATTGTAAAAGCATCACTAC
GGCCATCCATAACATTTACCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
GAAACGACCAAAACATGGTCCTGAACAAATATTGGATAAAAAGGTAACTCCAACAAATTGAAATAAGAAGCTGGGCGTGGTATGTGAATACACCATGAAATCTTCGTCGG
GGCAATCACGGCCGGACCTCCCCGTACCGCCTAATCGCGGCAAGTTTCAATCGGACACGGAGAGATTGAGCGCTGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATG
GTCAGTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAACTCTGAGAAGGCGAAGAAAGATGCCATACAGAAGGCGGTACGCGTTTCGGATCTTTTAGTCGATACCGT
GAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCAAGATTTACGAAGCAAACCGATCAATGGCTTG
CCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTTGATTGTAAAAGCATCACTACGGCCATCCATAACATT
TACCAAGACTGAAATGCTTGTAGTTAAAGAATCAACCAGAATGTAGTCTGTAGAGTCGAGAAAAAGATAGATCCTCATCCTCTGCTTTAAGTTTCTCTGAATCTCTGCCC
CCATACATGGTTTGATAAGTTCAAAGGGTGCAGCATGCCCAGATGAAAAGCCTTAGTAGCTTAGAACATGACAGTCACCTGGCGTCTGCTACCTCGCTAATTGTATAAAT
GATTGTTCGACTCTGTTTTTTATGTTCACTGATTTGTTCTTCATTAGCACATCGCATGTTACCATTTTGCCCATTTATTGCCTATGTAAACTGCAGTCTTCACTGTGCAA
CTATTAGCAGCTTCCATGTAATAATAATATCTACATTCTTTCAATTTTTGGTATCCCTATTATACTCTCTCCATTAATATTCAGC
Protein sequenceShow/hide protein sequence
MKSSSGQSRPDLPVPPNRGKFQSDTERLSADVGGLEASLLQMVSDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD