CuGenDBv2

Gene ID	Pay0006048
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ty1-copia retrotransposon protein
Genome location	chr01:13113241..13114490
RNA-Seq Expression	Pay0006048
Synteny	Pay0006048
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051006.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

8.1e-166

81.27

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP++EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK

TYK11299.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

1.1e-170

95.57

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC
        EKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGK
        VFMGNSATAGVIGKGK
Subjt:  VFMGNSATAGVIGKGK

TYK11996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

3.4e-172

81.12

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA

TYK24060.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]

3.4e-172

81.12

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA

XP_008445782.1 PREDICTED: uncharacterized protein LOC103488707 [Cucumis melo]

4.1e-178

95.14

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC
        EKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGKEPGVWEFIESGRA
        VFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  VFMGNSATAGVIGKGKEPGVWEFIESGRA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BE75 uncharacterized protein LOC103488707

2.0e-178

95.14

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC
        EKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGKEPGVWEFIESGRA
        VFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  VFMGNSATAGVIGKGKEPGVWEFIESGRA

A0A5A7U9X9 Ty1-copia retrotransposon protein

3.9e-166

81.27

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP++EQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGK

A0A5D3CM58 Ty1-copia retrotransposon protein

5.3e-171

95.57

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLD TNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVT+QVK DQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANV+DRTKQEKGHKGKNS
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNS

Query:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC
        EKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDS+IIA IVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGEC
Subjt:  EKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGEC

Query:  VFMGNSATAGVIGKGK
        VFMGNSATAGVIGKGK
Subjt:  VFMGNSATAGVIGKGK

A0A5D3CNJ2 Ty1-copia retrotransposon protein

1.6e-172

81.12

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPL+GTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKP+VEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA

A0A5D3DL36 Ty1-copia retrotransposon protein

1.6e-172

81.12

Show/hide

Query:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH
        MSIKT NKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLT VAVTDQVKKDQVIDPEKYA DNKTVRGH
Subjt:  MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGH

Query:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------
        LLNHMS+PMFDLF+VQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMCEILQANVL              
Subjt:  LLNHMSNPMFDLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL--------------

Query:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG
                                                         DRTKQEKGHKGKNSEKRQFKT GGQIKKKKLVCYVCGKEGHKSYQCNQRKG
Subjt:  -------------------------------------------------DRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCYVCGKEGHKSYQCNQRKG

Query:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA
        RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDT ASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWE +ESGRA
Subjt:  RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

5.3e-14

25.43

Show/hide

Query:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGHLLNHMSNPMFDLFI
        K+   DG +Y  W+ ++ +F +QL++ YVL      S+P  +  +S  PE++   +T    T           +K+  D+     HL+N +S+ ++  + 
Subjt:  KLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGHLLNHMSNPMFDLFI

Query:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL
         + K AK++W  L+  Y  D++  K+  V K+++F+M +++PI+EQ+  +  +  +++S GM + E    + +
Subjt:  VQ-KSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGATCAAGACCTTCAACAAAATCCTACCGGACCTGTCTAAACTTGAGCCACTCGACGGAACAAACTACCGCCGTTGGTCCCAAAAGTTGCTAATCTTCTTTGAGCA
ACTAGAAGTCGATTATGTCCTCACTACAGATCTCCCGACATCTGACCCCCCAACTACCACGTCAACATCCTCTGATCCAGAATCATCTACGGGGCCTCTTACAACTGTCG
CTGTCACTGATCAAGTAAAGAAGGACCAAGTGATTGATCCTGAAAAATATGCAATGGATAACAAGACCGTTCGAGGACACTTGTTAAACCATATGTCTAACCCGATGTTT
GACCTCTTCATAGTCCAAAAATCTGCCAAGGACATCTGGAGCACCCTGGAATCACGGTATGGAGGAGATGATGCTGGACGGAAAAAATATGTAGTTGGAAAATGGCTACA
ATTCCAGATGACTGACGACAAACCAATCGTGGAACAAATACATGAGTACGAGAACTTGGTGGCAAACGTCCTGTCTGAAGGCATGAAGATGTGCGAAATACTTCAAGCAA
ATGTCCTAGACAGAACGAAGCAGGAAAAAGGACATAAAGGGAAAAACTCAGAGAAGAGACAATTCAAGACTAATGGGGGACAAATTAAGAAGAAAAAGCTGGTTTGCTAC
GTGTGCGGAAAGGAAGGGCACAAATCATACCAATGCAACCAGAGGAAAGGGAGGCCAAGTCAGAAACCAACACCTCAAGCCAATCTAGCAGAGCAAGACAGTGAGATCAT
AGCAGCCATAGTAGAAGCCAATCTGATAGAAAACAAGACGGACTGGATTCTCGACACTAGAGCCTCGAGACACTTCTGCACCAATCGTGAACTACTCCATGACTACGAAG
ACACTGCCGATGGAGAATGCGTGTTCATGGGAAACTCAGCCACTGCAGGAGTAATCGGGAAAGGAAAGGAACCTGGTGTTTGGGAGTTTATTGAATCGGGTCGGGCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSIKTFNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSDPPTTTSTSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAMDNKTVRGHLLNHMSNPMF
DLFIVQKSAKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMCEILQANVLDRTKQEKGHKGKNSEKRQFKTNGGQIKKKKLVCY
VCGKEGHKSYQCNQRKGRPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTRASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGKEPGVWEFIESGRA

Pay0006048 (gene) of Melon (Payzawat) v1 genome