; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006180 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006180
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr02:17067217..17070635
RNA-Seq ExpressionPay0006180
SyntenyPay0006180
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR021109 - Aspartic peptidase domain superfamily
IPR005162 - Retrotransposon gag domain
IPR000477 - Reverse transcriptase domain
IPR001878 - Zinc finger, CCHC-type
IPR001969 - Aspartic peptidase, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]0.0e+0090.79Show/hide
Query:  GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAP
        GSLVVVREM PRRGARRGG+GGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQ+   PTP PAPAPAPAPAPAPAPA VPVAP
Subjt:  GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAP

Query:  QF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFF
        Q           HLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFF
Subjt:  QF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFF

Query:  SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQ
        SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQ
Subjt:  SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQ

Query:  KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR---------
        KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+         
Subjt:  KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR---------

Query:  -AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDW
         AE+AGTVVTGTLPVLGHYALVLFDSGSSHSFISS FVLHARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDW
Subjt:  -AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDW

Query:  LAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE
        LAANHASIDCSRKEVTFNPPS ASFKFK                            ASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE
Subjt:  LAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE

Query:  LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
        LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Subjt:  LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS

Query:  GYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWL
        GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWL
Subjt:  GYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWL

Query:  KQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS
        KQVSFLGHV            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGS
Subjt:  KQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
        GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLF
        ILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLF
Subjt:  ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLF

Query:  ERRLCVPSDSTVKTELLSEAHSSPFSMHP
        ERRLCVPSDS VKTELLSEAHSSPFSMHP
Subjt:  ERRLCVPSDSTVKTELLSEAHSSPFSMHP

KAA0043391.1 pol protein [Cucumis melo var. makuwa]0.0e+0091.42Show/hide
Query:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA
        K SL +VREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPA APAPAPAPAPAPAPAPVPVA
Subjt:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA

Query:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF
        PQF          HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKF
Subjt:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF

Query:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
        FSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
Subjt:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG

Query:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------
        QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+        
Subjt:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------

Query:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
          AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISS FVLHARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLDMLDFDVILGMD
Subjt:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD

Query:  WLAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
        WLAANHASIDCSRKEVTFNPPS ASFKFK                            ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
Subjt:  WLAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI

Query:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
        ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
Subjt:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR

Query:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW
        SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFW
Subjt:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW

Query:  LKQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG
        LKQVSFLGHV            IEAVTGWTRPSTVSEVRSFLGLAGYY RFVENFS IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG
Subjt:  LKQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG

Query:  SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC
        SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSH+QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC
Subjt:  SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC

Query:  EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
        E LYHPGKANVVADALSRKVSHSAALITRQA LHRDLERA+IAVSVGAVTMQLAQLTVQPTLRQRI+DAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
Subjt:  EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL

Query:  FERRLCVPSDSTVKTELLSEAHSSPFSMHP
        FERRLCVPSDS VK ELLSEAHSSPFSMHP
Subjt:  FERRLCVPSDSTVKTELLSEAHSSPFSMHP

KAA0059062.1 pol protein [Cucumis melo var. makuwa]0.0e+0091.68Show/hide
Query:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA
        +GSLVVVREMPPRRG+RRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAP PVPVA
Subjt:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA

Query:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF
        PQF          HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKF
Subjt:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF

Query:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
        FSA LRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRL VDLSLQERANSSKTAGRGLTSG
Subjt:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG

Query:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------
        QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGT+TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+        
Subjt:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------

Query:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
          AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPL HVLSV TPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
Subjt:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD

Query:  WLAANHASIDCSRKEVTFNPPSRASFKFKEK--------------------------ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
        WLAANHASIDCSRKEVTFNPPS+ASFKFK +                          ASVVD READVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
Subjt:  WLAANHASIDCSRKEVTFNPPSRASFKFKEK--------------------------ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI

Query:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
        ELE GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
Subjt:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR

Query:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW
        SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSK +  
Subjt:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW

Query:  LKQVSFLGHVIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK
                  IEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK
Subjt:  LKQVSFLGHVIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK

Query:  KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV
        KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV
Subjt:  KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV

Query:  ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDST
        ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS 
Subjt:  ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDST

Query:  VKTELLSEAHSSPFSMHP
        +KTELLSEAHSSPFSMHP
Subjt:  VKTELLSEAHSSPFSMHP

KAA0062112.1 pol protein [Cucumis melo var. makuwa]0.0e+0093.43Show/hide
Query:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----
        EMPPRRGARRGGRGGRG+GAGRVQPEVQPVAQA +PAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPA  PAPAPVPVAPQF     
Subjt:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----

Query:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA
             HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFFSASLRDA
Subjt:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA

Query:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ
        KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRG TSGQKRKAEQQ
Subjt:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ

Query:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT
        PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+          AEKAGT
Subjt:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT

Query:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
        VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHA LEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
Subjt:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS

Query:  IDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK
        IDCSRKEVTFNPPS+ASFKFK + S    +   VSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK
Subjt:  IDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK

Query:  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL
        GFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL
Subjt:  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL

Query:  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV------------IEAVTGWTRPST
        TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV            IEAVTGWTRPST
Subjt:  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV------------IEAVTGWTRPST

Query:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
        VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGLGCVLMQQGKVVAYASRQLK
Subjt:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK

Query:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH
        SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH
Subjt:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH

Query:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSTVKTELLSEAHSSPFSMHP
        RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHP
Subjt:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSTVKTELLSEAHSSPFSMHP

TYK01613.1 pol protein [Cucumis melo var. makuwa]0.0e+0091.71Show/hide
Query:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----
        EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQF     
Subjt:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----

Query:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA
             HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFFSASLRDA
Subjt:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA

Query:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ
        KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQ
Subjt:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ

Query:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT
        PVPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPH+          AEKAGT
Subjt:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT

Query:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
        VVTGTLPVLGHYALVLFDSGSSHSFISS FV HARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHAS
Subjt:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS

Query:  IDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP
        IDCSRKEVTFNPPS ASFKFK                            ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP
Subjt:  IDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP

Query:  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
Subjt:  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
        KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
Subjt:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYS
        HV            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYS
Subjt:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYS

Query:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
        DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Subjt:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK

Query:  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP
        ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVP
Subjt:  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP

Query:  SDSTVKTELLSEAHSSPFSMHP
        SDS VKTELLSEAHSSPFSMHP
Subjt:  SDSTVKTELLSEAHSSPFSMHP

TrEMBL top hitse value%identityAlignment
A0A5A7SQU8 Reverse transcriptase0.0e+0090.79Show/hide
Query:  GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAP
        GSLVVVREM PRRGARRGG+GGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQ+   PTP PAPAPAPAPAPAPAPA VPVAP
Subjt:  GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAP

Query:  QF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFF
        Q           HLRDFRKYNPTTFDGSLEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFF
Subjt:  QF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFF

Query:  SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQ
        SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQ
Subjt:  SASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQ

Query:  KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR---------
        KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+         
Subjt:  KRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR---------

Query:  -AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDW
         AE+AGTVVTGTLPVLGHYALVLFDSGSSHSFISS FVLHARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDW
Subjt:  -AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDW

Query:  LAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE
        LAANHASIDCSRKEVTFNPPS ASFKFK                            ASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE
Subjt:  LAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIE

Query:  LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
        LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPS+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
Subjt:  LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS

Query:  GYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWL
        GYHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLR+VLQTLRDNKLYAKFSKCEFWL
Subjt:  GYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWL

Query:  KQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS
        KQVSFLGHV            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIA PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTA VLTVPDGS
Subjt:  KQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
        GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLF
        ILYHP KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVT QLAQLTVQ TLRQRIIDAQ NDPYLVEKRGLAEAGQAVEFSLSSDGGLLF
Subjt:  ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLF

Query:  ERRLCVPSDSTVKTELLSEAHSSPFSMHP
        ERRLCVPSDS VKTELLSEAHSSPFSMHP
Subjt:  ERRLCVPSDSTVKTELLSEAHSSPFSMHP

A0A5A7TP96 Reverse transcriptase0.0e+0091.42Show/hide
Query:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA
        K SL +VREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPA APAPAPAPAPAPAPAPVPVA
Subjt:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA

Query:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF
        PQF          HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKF
Subjt:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF

Query:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
        FSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
Subjt:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG

Query:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------
        QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+        
Subjt:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------

Query:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
          AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISS FVLHARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLDMLDFDVILGMD
Subjt:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD

Query:  WLAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
        WLAANHASIDCSRKEVTFNPPS ASFKFK                            ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
Subjt:  WLAANHASIDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI

Query:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
        ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
Subjt:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR

Query:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW
        SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFW
Subjt:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW

Query:  LKQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG
        LKQVSFLGHV            IEAVTGWTRPSTVSEVRSFLGLAGYY RFVENFS IATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG
Subjt:  LKQVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDG

Query:  SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC
        SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSH+QNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC
Subjt:  SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDC

Query:  EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
        E LYHPGKANVVADALSRKVSHSAALITRQA LHRDLERA+IAVSVGAVTMQLAQLTVQPTLRQRI+DAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
Subjt:  EILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL

Query:  FERRLCVPSDSTVKTELLSEAHSSPFSMHP
        FERRLCVPSDS VK ELLSEAHSSPFSMHP
Subjt:  FERRLCVPSDSTVKTELLSEAHSSPFSMHP

A0A5A7UT37 Reverse transcriptase0.0e+0091.68Show/hide
Query:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA
        +GSLVVVREMPPRRG+RRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAP PVPVA
Subjt:  KGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVA

Query:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF
        PQF          HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKF
Subjt:  PQF----------HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKF

Query:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG
        FSA LRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRL VDLSLQERANSSKTAGRGLTSG
Subjt:  FSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSG

Query:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------
        QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGT+TCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+        
Subjt:  QKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR--------

Query:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
          AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPL HVLSV TPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD
Subjt:  --AEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMD

Query:  WLAANHASIDCSRKEVTFNPPSRASFKFKEK--------------------------ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
        WLAANHASIDCSRKEVTFNPPS+ASFKFK +                          ASVVD READVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI
Subjt:  WLAANHASIDCSRKEVTFNPPSRASFKFKEK--------------------------ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAI

Query:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
        ELE GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR
Subjt:  ELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLR

Query:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW
        SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSK +  
Subjt:  SGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFW

Query:  LKQVSFLGHVIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK
                  IEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK
Subjt:  LKQVSFLGHVIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASK

Query:  KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV
        KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV
Subjt:  KGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVV

Query:  ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDST
        ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS 
Subjt:  ADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDST

Query:  VKTELLSEAHSSPFSMHP
        +KTELLSEAHSSPFSMHP
Subjt:  VKTELLSEAHSSPFSMHP

A0A5A7V1N3 Reverse transcriptase0.0e+0093.43Show/hide
Query:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----
        EMPPRRGARRGGRGGRG+GAGRVQPEVQPVAQA +PAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPA  PAPAPVPVAPQF     
Subjt:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----

Query:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA
             HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFFSASLRDA
Subjt:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA

Query:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ
        KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRG TSGQKRKAEQQ
Subjt:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ

Query:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT
        PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPH+          AEKAGT
Subjt:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT

Query:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
        VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHA LEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
Subjt:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS

Query:  IDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK
        IDCSRKEVTFNPPS+ASFKFK + S    +   VSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK
Subjt:  IDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDK

Query:  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL
        GFIRPSVSP GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL
Subjt:  GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGL

Query:  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV------------IEAVTGWTRPST
        TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV            IEAVTGWTRPST
Subjt:  TNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHV------------IEAVTGWTRPST

Query:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK
        VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKKGLGCVLMQQGKVVAYASRQLK
Subjt:  VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLK

Query:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH
        SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH
Subjt:  SHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLH

Query:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSTVKTELLSEAHSSPFSMHP
        RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHP
Subjt:  RDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSTVKTELLSEAHSSPFSMHP

A0A5D3BPI1 Reverse transcriptase0.0e+0091.71Show/hide
Query:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----
        EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRD+IMQMREQQKPASPTPAPAPAPAPAP PAPAPAPVPVAPQF     
Subjt:  EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQF-----

Query:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA
             HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVF+              MLGGDVSQITWQQFKESFYAKFFSASLRDA
Subjt:  -----HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFI-------------EMLGGDVSQITWQQFKESFYAKFFSASLRDA

Query:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ
        KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQ
Subjt:  KRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQ

Query:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT
        PVPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTG AQNQGAGAPH+          AEKAGT
Subjt:  PVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHR----------AEKAGT

Query:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS
        VVTGTLPVLGHYALVLFDSGSSHSFISS FV HARLEVEPLHHVLSVSTPSGECMLSKEKVK CQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHAS
Subjt:  VVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHAS

Query:  IDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP
        IDCSRKEVTFNPPS ASFKFK                            ASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP
Subjt:  IDCSRKEVTFNPPSRASFKFKE--------------------------KASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVP

Query:  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
Subjt:  ISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
        KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
Subjt:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYS
        HV            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYS
Subjt:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYS

Query:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
        DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK
Subjt:  DASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGK

Query:  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP
        ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVP
Subjt:  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP

Query:  SDSTVKTELLSEAHSSPFSMHP
        SDS VKTELLSEAHSSPFSMHP
Subjt:  SDSTVKTELLSEAHSSPFSMHP

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.4e-8439.9Show/hide
Query:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG
          E V KTAF +++GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L    L  +  KCEF  ++ +FLG
Subjt:  KDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG

Query:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY
        HV            IEA+  +  P+   E+++FLGL GYYR+F+ NF+ IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + 
Subjt:  HV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS-FQNLKQKLVTAPVLTVPDGSGSFVIY

Query:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein2.6e-8329.99Show/hide
Query:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG
        H  ++   V+   LP        L D+G+  + I+   V   +L   P     S S   G    +K   KT ++ I+  G  I+   LV+        + 
Subjt:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG

Query:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL
           L  N+  I  S+   T +  ++ S   KE   + D  +    +++E           E+LP   P + +EF +EL      +    Y + P +++ +
Subjt:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL

Query:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH
          ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G 
Subjt:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH

Query:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE
        +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G H+           I+
Subjt:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE

Query:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK
         V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Subjt:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK

Query:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA
              V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Subjt:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV
        LSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV

Query:  KTELLSEAHSSPFSMHP
           ++ + H     +HP
Subjt:  KTELLSEAHSSPFSMHP

P0CT35 Transposon Tf2-2 polyprotein2.6e-8329.99Show/hide
Query:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG
        H  ++   V+   LP        L D+G+  + I+   V   +L   P     S S   G    +K   KT ++ I+  G  I+   LV+        + 
Subjt:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG

Query:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL
           L  N+  I  S+   T +  ++ S   KE   + D  +    +++E           E+LP   P + +EF +EL      +    Y + P +++ +
Subjt:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL

Query:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH
          ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G 
Subjt:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH

Query:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE
        +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G H+           I+
Subjt:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE

Query:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK
         V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Subjt:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK

Query:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA
              V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Subjt:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV
        LSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV

Query:  KTELLSEAHSSPFSMHP
           ++ + H     +HP
Subjt:  KTELLSEAHSSPFSMHP

P0CT41 Transposon Tf2-12 polyprotein2.6e-8329.99Show/hide
Query:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG
        H  ++   V+   LP        L D+G+  + I+   V   +L   P     S S   G    +K   KT ++ I+  G  I+   LV+        + 
Subjt:  HRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKTCQIEIA--GHVIEVTLLVLDMLDFDVILG

Query:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL
           L  N+  I  S+   T +  ++ S   KE   + D  +    +++E           E+LP   P + +EF +EL      +    Y + P +++ +
Subjt:  MDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKEL

Query:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH
          ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K AFR   G 
Subjt:  KVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGH

Query:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE
        +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G H+           I+
Subjt:  YEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG-HV-----------IE

Query:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK
         V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL Q+  
Subjt:  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK

Query:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA
              V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADA
Subjt:  -----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV
        LSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  + +P+D+ +
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSTV

Query:  KTELLSEAHSSPFSMHP
           ++ + H     +HP
Subjt:  KTELLSEAHSSPFSMHP

P20825 Retrovirus-related Pol polyprotein from transposon 2979.0e-8438.37Show/hide
Query:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
        PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G
Subjt:  PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG

Query:  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLK
        +HQ+ + +E + KTAF ++ GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V   L D  L  +  KCEF  K
Subjt:  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLK

Query:  QVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS
        + +FLGH+            ++A+  +  P+   E+R+FLGL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Subjt:  QVSFLGHV------------IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSK-ACEDSFQNLKQKLVTAPVLTVPDGS

Query:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE
          FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  +
Subjt:  GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE

Query:  ILYHPGKANVVADALSR
        I Y  GK N VADALSR
Subjt:  ILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.0e-2139.69Show/hide
Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH--------------VIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LGH               +EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH--------------VIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQNLKQKLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAAGGATCGTTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGT
GCAGCCTGTAGCCCAAGCCCTTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCTGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGA
AGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGCTCCTGCTCCGGCTCCGGCCCCAGTACCAGTTGCGCCCCAGTTTCACCTGAGGGATTTC
AGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGA
TCAGAAAGTTCAGTGTGCTGTTTTTATAGAGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTT
TGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTACGATGCGGAGTTTGACATGTTGTCCCGCTTCGCTCCCGAGATGATA
GCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGC
AGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTTGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGC
GGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTG
GGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGAACGCGCAGAATCAGGGAGCAGG
TGCTCCACACAGGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCT
CGTCCACATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAGTGTATGTTATCGAAGGAAAAGGTGAAAACA
TGCCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGTTAGTTCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTAGCCGCTAACCACGCCAG
CATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGAGGGCCAGTTTTAAATTTAAGGAGAAGGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGT
CATCAGAACCAGTAGTGAGGGACTATCCGGATGTCTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTT
CCTATATCCAGGGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTG
GGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGA
TTGACGATCTATTCGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCA
TTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGA
TACTTTTGTGATCGTGTTTATCGACGACATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGT
ATGCAAAGTTCTCGAAATGTGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACTGTCAGTGAGGTTCGT
AGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAA
GGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGA
AGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCA
GTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATAT
GAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATT
CGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAG
CCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAAGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGA
TGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCGGATAGTACGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGTAGTAC
GAAGATGTATCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAAGGATCGTTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGT
GCAGCCTGTAGCCCAAGCCCTTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCTGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGA
AGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCCAGCTCCAGCACCAGCTCCTGCTCCGGCTCCGGCCCCAGTACCAGTTGCGCCCCAGTTTCACCTGAGGGATTTC
AGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGA
TCAGAAAGTTCAGTGTGCTGTTTTTATAGAGATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTT
TGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTACGATGCGGAGTTTGACATGTTGTCCCGCTTCGCTCCCGAGATGATA
GCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGC
AGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTTGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGC
GGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTG
GGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGAACGCGCAGAATCAGGGAGCAGG
TGCTCCACACAGGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCT
CGTCCACATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAGTGTATGTTATCGAAGGAAAAGGTGAAAACA
TGCCAGATTGAGATAGCAGGCCATGTGATTGAGGTAACGCTGTTAGTTCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTAGCCGCTAACCACGCCAG
CATAGATTGTTCCCGTAAGGAGGTAACGTTTAACCCTCCCTCGAGGGCCAGTTTTAAATTTAAGGAGAAGGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGT
CATCAGAACCAGTAGTGAGGGACTATCCGGATGTCTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTT
CCTATATCCAGGGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTG
GGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGA
TTGACGATCTATTCGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCA
TTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGA
TACTTTTGTGATCGTGTTTATCGACGACATCTTGATATACTCCAAGACGGAGGCCGAACACGAGAAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGT
ATGCAAAGTTCTCGAAATGTGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGTCACGTGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACTGTCAGTGAGGTTCGT
AGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAA
GGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGA
AGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCA
GTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATAT
GAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATT
CGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAG
CCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAAGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGA
TGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCGGATAGTACGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCGGTAGTAC
GAAGATGTATCAGGATCTGA
Protein sequenceShow/hide protein sequence
MTKGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQALDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPAPAPVPVAPQFHLRDF
RKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFIEMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMI
ATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHL
GRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHRAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSTFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKT
CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSRASFKFKEKASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTV
PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVIEAVTGWTRPSTVSEVR
SFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ
PTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSTVKTELLSEAHSSPFSMHPVVRRCIRI