CuGenDBv2

Gene ID	Pay0006252
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Gag-pol polyprotein
Genome location	chr08:22392286..22394119
RNA-Seq Expression	Pay0006252
Synteny	Pay0006252
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035966.1 F5J5.1 [Cucumis melo var. makuwa]

3.1e-153

58.2

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Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL
        +I VNGVSVPKPEVDWTNAEEQ  VGN RAL AIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE                                  VL
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL

Query:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT
        +IANESLLLGEKIP SK+VRKVLRS+ RKFDMKV AIEEA DITT              MAT DRESKKGKGI+FKSTHV++EA CDTK NMDESIALLT
Subjt:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT

Query:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------
        KQFTNAL NLK+PNAT                                                                                    
Subjt:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------

Query:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS
                                              G +NL+SI K  HNGS RYGLGFV+SASSSKATSEIKFVP SMRVEYDTIH ET IR  VKS
Subjt:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS

Query:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK
         GRT YYCG+KGHIRSICYKLR+D            AQP MVWRIK  ERCKIAFTSVQT DD WYFDSGCSRHMTGNRSYF NLNDCV GHVTFGDGAK
Subjt:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK

Query:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK
         KIIAKGNI+KDDLPRLNDVRYVD LKANLISI+QLCDQGYKVSFDDIGC VMNK
Subjt:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK

KAA0041592.1 gag-pol polyprotein [Cucumis melo var. makuwa]

7.8e-141

60.57

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP
        MITVN VS+PKPEVDWT+A+EQ  VGNARAL  IFNGVDLNVFKLINSCS  KEAWKTLEVAYE       VL+IANESLLL EKIP  K+VRKVLRSLP
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP

Query:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATG----------
        RK DMKV AIEEA DITT              MAT DRESKKGKGIAFKSTHV+EEAGCDT+ NMDESIALLTKQFTNAL NLKS NA G          
Subjt:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATG----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --TENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RA
          TENL+SI KA HN SHRYGLGFVASASSSKATS+IKFVP SMRVEYD   TET IRT VKSFGRTCY+CGRKGHIRSICYKLRRD           RA
Subjt:  --TENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RA

Query:  QPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVD
        QP MVWRIKS +RCKI+FTSVQT DDAWYFDSGCSRHMTGNRSYFTNLNDC   HV FGDGAKE IIAKGNIDKDDLPRLNDVRY+D
Subjt:  QPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVD

KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa]

1.5e-136

58.81

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Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE---VLEIAN--------ESLLLGEKIPYSKMVRKVL
        MI VNGVS+PKPEVDWT+ EEQ  VGNARAL AIFNGVDLNVFKLIN CSTAKEAWKTLEVAYE    ++I+         E+L + E    S    K++
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE---VLEIAN--------ESLLLGEKIPYSKMVRKVL

Query:  RSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDE-------------------------SIAL
          +  +  + V AIEEA DITT              M T +RESKKGKGIAFKSTHV+EEA CDT+ NMDE                          + L
Subjt:  RSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDE-------------------------SIAL

Query:  LTKQFTNA-----------------------------------------LW---------------NLKSPNATGTENLNSIPKARHNGSHRYGLGFVAS
          K+F ++                                         LW               +L   N     NL+SI KA HNGSHRYGLGFVAS
Subjt:  LTKQFTNA-----------------------------------------LW---------------NLKSPNATGTENLNSIPKARHNGSHRYGLGFVAS

Query:  ASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAERCKIAFTSVQTTDDA
        ASSSKATSEIKFVP SMRVEYDTIHT+T IRTPVKS GRTCYYCGRKGHIRSICYKL+RD           RAQPRMV RIKSAERCK+AFTSVQT DD 
Subjt:  ASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAERCKIAFTSVQTTDDA

Query:  WYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVM
        WYFDSGCSRHM GNRSYFTNLNDCV  HVTFGDGAK KIIAKGNIDKDDL RLNDVRYVD LKANLI+ISQLCDQGYKVSFDDIGCV+
Subjt:  WYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVM

TYK30437.1 F5J5.1 [Cucumis melo var. makuwa]

3.1e-153

58.2

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Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL
        +I VNGVSVPKPEVDWTNAEEQ  VGN RAL AIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE                                  VL
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL

Query:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT
        +IANESLLLGEKIP SK+VRKVLRS+ RKFDMKV AIEEA DITT              MAT DRESKKGKGI+FKSTHV++EA CDTK NMDESIALLT
Subjt:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT

Query:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------
        KQFTNAL NLK+PNAT                                                                                    
Subjt:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------

Query:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS
                                              G +NL+SI K  HNGS RYGLGFV+SASSSKATSEIKFVP SMRVEYDTIH ET IR  VKS
Subjt:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS

Query:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK
         GRT YYCG+KGHIRSICYKLR+D            AQP MVWRIK  ERCKIAFTSVQT DD WYFDSGCSRHMTGNRSYF NLNDCV GHVTFGDGAK
Subjt:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK

Query:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK
         KIIAKGNI+KDDLPRLNDVRYVD LKANLISI+QLCDQGYKVSFDDIGC VMNK
Subjt:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK

XP_008453704.1 PREDICTED: uncharacterized protein LOC103494352 [Cucumis melo]

1.1e-147

78.65

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP
        MITVNGVS+ KPEVDWT+AE+Q  +GNARAL  IFNGVDL+VFKLINSCSTAKEAWKTLEVAYE       VLEIANESLLLGEKIP SK+VRKVLRSLP
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP

Query:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATGTENLNSIPKA
        RKFDMKVIAIEEA DITT              MAT DRESKKGKGIAFKSTHVSEE  CD K N+D+SIALLTKQFTNAL NLK+ N TGTENL+SI K 
Subjt:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATGTENLNSIPKA

Query:  RHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAE
         HNGSHRYGLGFVAS SSSKATSEIKFVP S+RVEYDTIHTET IRTPVKS GRTCYYCGRKGHI+SICYKLRRD           R QPR+VWRIKSAE
Subjt:  RHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAE

Query:  RCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIA
        RCKIAFTS+QT D  WY D+GCSRHMTGNRSYFTNLND VTGHVTFGDGAK KIIA
Subjt:  RCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BWZ4 uncharacterized protein LOC103494352

5.5e-148

78.65

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP
        MITVNGVS+ KPEVDWT+AE+Q  +GNARAL  IFNGVDL+VFKLINSCSTAKEAWKTLEVAYE       VLEIANESLLLGEKIP SK+VRKVLRSLP
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP

Query:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATGTENLNSIPKA
        RKFDMKVIAIEEA DITT              MAT DRESKKGKGIAFKSTHVSEE  CD K N+D+SIALLTKQFTNAL NLK+ N TGTENL+SI K 
Subjt:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATGTENLNSIPKA

Query:  RHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAE
         HNGSHRYGLGFVAS SSSKATSEIKFVP S+RVEYDTIHTET IRTPVKS GRTCYYCGRKGHI+SICYKLRRD           R QPR+VWRIKSAE
Subjt:  RHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAE

Query:  RCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIA
        RCKIAFTS+QT D  WY D+GCSRHMTGNRSYFTNLND VTGHVTFGDGAK KIIA
Subjt:  RCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIA

A0A5A7T169 F5J5.1

1.5e-153

58.2

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Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL
        +I VNGVSVPKPEVDWTNAEEQ  VGN RAL AIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE                                  VL
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL

Query:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT
        +IANESLLLGEKIP SK+VRKVLRS+ RKFDMKV AIEEA DITT              MAT DRESKKGKGI+FKSTHV++EA CDTK NMDESIALLT
Subjt:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT

Query:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------
        KQFTNAL NLK+PNAT                                                                                    
Subjt:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------

Query:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS
                                              G +NL+SI K  HNGS RYGLGFV+SASSSKATSEIKFVP SMRVEYDTIH ET IR  VKS
Subjt:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS

Query:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK
         GRT YYCG+KGHIRSICYKLR+D            AQP MVWRIK  ERCKIAFTSVQT DD WYFDSGCSRHMTGNRSYF NLNDCV GHVTFGDGAK
Subjt:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK

Query:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK
         KIIAKGNI+KDDLPRLNDVRYVD LKANLISI+QLCDQGYKVSFDDIGC VMNK
Subjt:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK

A0A5A7TNK7 Gag-pol polyprotein

7.4e-137

58.81

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE---VLEIAN--------ESLLLGEKIPYSKMVRKVL
        MI VNGVS+PKPEVDWT+ EEQ  VGNARAL AIFNGVDLNVFKLIN CSTAKEAWKTLEVAYE    ++I+         E+L + E    S    K++
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE---VLEIAN--------ESLLLGEKIPYSKMVRKVL

Query:  RSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDE-------------------------SIAL
          +  +  + V AIEEA DITT              M T +RESKKGKGIAFKSTHV+EEA CDT+ NMDE                          + L
Subjt:  RSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDE-------------------------SIAL

Query:  LTKQFTNA-----------------------------------------LW---------------NLKSPNATGTENLNSIPKARHNGSHRYGLGFVAS
          K+F ++                                         LW               +L   N     NL+SI KA HNGSHRYGLGFVAS
Subjt:  LTKQFTNA-----------------------------------------LW---------------NLKSPNATGTENLNSIPKARHNGSHRYGLGFVAS

Query:  ASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAERCKIAFTSVQTTDDA
        ASSSKATSEIKFVP SMRVEYDTIHT+T IRTPVKS GRTCYYCGRKGHIRSICYKL+RD           RAQPRMV RIKSAERCK+AFTSVQT DD 
Subjt:  ASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RAQPRMVWRIKSAERCKIAFTSVQTTDDA

Query:  WYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVM
        WYFDSGCSRHM GNRSYFTNLNDCV  HVTFGDGAK KIIAKGNIDKDDL RLNDVRYVD LKANLI+ISQLCDQGYKVSFDDIGCV+
Subjt:  WYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVM

A0A5D3D840 Gag-pol polyprotein

3.8e-141

60.57

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP
        MITVN VS+PKPEVDWT+A+EQ  VGNARAL  IFNGVDLNVFKLINSCS  KEAWKTLEVAYE       VL+IANESLLL EKIP  K+VRKVLRSLP
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE-------VLEIANESLLLGEKIPYSKMVRKVLRSLP

Query:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATG----------
        RK DMKV AIEEA DITT              MAT DRESKKGKGIAFKSTHV+EEAGCDT+ NMDESIALLTKQFTNAL NLKS NA G          
Subjt:  RKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATG----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --TENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RA
          TENL+SI KA HN SHRYGLGFVASASSSKATS+IKFVP SMRVEYD   TET IRT VKSFGRTCY+CGRKGHIRSICYKLRRD           RA
Subjt:  --TENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDH----------RA

Query:  QPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVD
        QP MVWRIKS +RCKI+FTSVQT DDAWYFDSGCSRHMTGNRSYFTNLNDC   HV FGDGAKE IIAKGNIDKDDLPRLNDVRY+D
Subjt:  QPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVD

A0A5D3E2Y4 F5J5.1

1.5e-153

58.2

Show/hide

Query:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL
        +I VNGVSVPKPEVDWTNAEEQ  VGN RAL AIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE                                  VL
Subjt:  MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYE----------------------------------VL

Query:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT
        +IANESLLLGEKIP SK+VRKVLRS+ RKFDMKV AIEEA DITT              MAT DRESKKGKGI+FKSTHV++EA CDTK NMDESIALLT
Subjt:  EIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDITT--------------MATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLT

Query:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------
        KQFTNAL NLK+PNAT                                                                                    
Subjt:  KQFTNALWNLKSPNAT------------------------------------------------------------------------------------

Query:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS
                                              G +NL+SI K  HNGS RYGLGFV+SASSSKATSEIKFVP SMRVEYDTIH ET IR  VKS
Subjt:  --------------------------------------GTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHTETDIRTPVKS

Query:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK
         GRT YYCG+KGHIRSICYKLR+D            AQP MVWRIK  ERCKIAFTSVQT DD WYFDSGCSRHMTGNRSYF NLNDCV GHVTFGDGAK
Subjt:  FGRTCYYCGRKGHIRSICYKLRRDHR----------AQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAK

Query:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK
         KIIAKGNI+KDDLPRLNDVRYVD LKANLISI+QLCDQGYKVSFDDIGC VMNK
Subjt:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGC-VMNK

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

5.9e-06

25.97

Show/hide

Query:  CYYCGRKGHIRSICYKLRRD-HRAQPRMVWRIKSAERCKIAFTSVQTTDDA------WYFDSGCSRHMTGNRSYFTN-------LNDCVTGHVTFGDGAK
        C++CGR+GHI+  C+  +R  +        ++++A    IAF   +  + +      +  DSG S H+  + S +T+       L   V     F    K
Subjt:  CYYCGRKGHIRSICYKLRRD-HRAQPRMVWRIKSAERCKIAFTSVQTTDDA------WYFDSGCSRHMTGNRSYFTN-------LNDCVTGHVTFGDGAK

Query:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVMNK
          I+   N   D    L DV +  E   NL+S+ +L + G  + FD  G  ++K
Subjt:  EKIIAKGNIDKDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVMNK

P25601 Putative transposon Ty5-1 protein YCL075W

2.9e-05

32.53

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Query:  CKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISI
        C ++ T   T    W FD+GC+ HM  +RS F++           G G    I+  G ++   + +L+DV YV +L  NLIS+
Subjt:  CKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNIDKDDLPRLNDVRYVDELKANLISI

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTACCGTGAATGGTGTCTCAGTTCCAAAACCTGAAGTTGATTGGACCAATGCAGAAGAGCAAGTTTTTGTTGGGAATGCCCGAGCTCTTAAAGCGATATTTAATGG
TGTTGACCTGAATGTTTTCAAGTTAATAAATTCCTGCAGTACAGCCAAAGAAGCTTGGAAAACCTTGGAGGTAGCGTATGAAGTTCTTGAAATTGCAAATGAGTCCTTGC
TGCTCGGTGAAAAGATACCTTATTCTAAGATGGTTCGGAAAGTACTTCGATCTTTGCCCAGAAAATTCGATATGAAAGTTATTGCAATTGAGGAAGCTCGTGATATTACA
ACGATGGCCACTACTGATAGAGAAAGTAAGAAAGGCAAGGGAATTGCTTTTAAATCCACACATGTAAGTGAGGAGGCTGGTTGCGATACTAAAGTAAATATGGATGAGTC
AATAGCTTTATTAACCAAACAATTCACAAACGCCCTTTGGAATTTAAAAAGTCCGAATGCCACAGGAACGGAGAATCTAAATTCAATACCTAAAGCTAGACATAATGGCT
CTCATAGATATGGGTTGGGATTTGTGGCCTCTGCAAGTAGTTCTAAAGCTACATCAGAAATCAAATTTGTTCCTACCTCAATGAGAGTTGAATATGACACTATTCATACA
GAGACTGACATTAGGACTCCAGTTAAATCTTTTGGGAGAACTTGTTACTATTGTGGTCGAAAAGGTCATATCAGGTCAATTTGTTATAAATTAAGGCGAGACCACCGTGC
TCAACCTCGCATGGTTTGGAGAATTAAATCTGCTGAAAGATGTAAGATTGCCTTTACATCCGTTCAGACCACAGATGATGCGTGGTATTTTGATAGTGGATGCTCCAGAC
ATATGACTGGAAACAGATCCTACTTTACGAACTTAAACGACTGTGTCACCGGACATGTTACCTTTGGTGATGGTGCAAAAGAAAAAATTATAGCTAAAGGTAACATAGAC
AAAGATGACCTACCACGTCTAAACGATGTTAGGTATGTGGATGAACTAAAAGCTAACTTGATCAGTATAAGTCAACTATGTGATCAAGGCTACAAAGTTAGTTTTGATGA
TATTGGTTGTGTTATGAATAAATAA

mRNA sequence

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Protein sequence

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MITVNGVSVPKPEVDWTNAEEQVFVGNARALKAIFNGVDLNVFKLINSCSTAKEAWKTLEVAYEVLEIANESLLLGEKIPYSKMVRKVLRSLPRKFDMKVIAIEEARDIT
TMATTDRESKKGKGIAFKSTHVSEEAGCDTKVNMDESIALLTKQFTNALWNLKSPNATGTENLNSIPKARHNGSHRYGLGFVASASSSKATSEIKFVPTSMRVEYDTIHT
ETDIRTPVKSFGRTCYYCGRKGHIRSICYKLRRDHRAQPRMVWRIKSAERCKIAFTSVQTTDDAWYFDSGCSRHMTGNRSYFTNLNDCVTGHVTFGDGAKEKIIAKGNID
KDDLPRLNDVRYVDELKANLISISQLCDQGYKVSFDDIGCVMNK

Pay0006252 (gene) of Melon (Payzawat) v1 genome