| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033527.1 gag-proteinase polyprotein [Cucumis melo var. makuwa] | 1.7e-133 | 54.48 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
MIFFIKMLDGKAWRALV YDPPMI VNGVSI K EVDWTDAEEQASVGNARA N IFN VDLNVFKLINSC+ AKEAWKTLE
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
Query: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
E +E TSK + ++ E YN+RVLEI NESLLLGEKIPDSKIVQK EAHDITTL+LDELFGSLLTFEMAT DR
Subjt: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
Query: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
+SKKGK IAFKSTHVDEEAVSDTEANMD E+ ++ + N N ++RRSDGYIKKK+GDRRIF+CRECG +GHYQ ECPTF+RKQ KNFCVTLS
Subjt: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
Query: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
DEESGDSRDDDDNINAFTIRITDEN DDE ECSEE K+DELTIEKLEALWKEDC+ + Q+E+ + +I +NE
Subjt: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
Query: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
I + + + NG + R+ ++ + F + ++ + H +IRT V + T Y C + P
Subjt: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
Query: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
T + +EYRQK DA+SEQ IFLGYSQNS YRV+NNRS SV++TINVVINDLDS IK
Subjt: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| KAA0042995.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.7e-149 | 42.52 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDP MI VNGVSI KPEVDWTD EEQASVGNARA N IFNGVDLNVFKLIN CSTAKEAWKTLE YEGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQKEAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKSTHVDEEAVSDTEANMDE
+YN+ VLEI NESLLL I +EAHDITTLKLDELFGSLLTFEM T +R+SKKGK IAFKSTHV+EEA DTEANMDE
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQKEAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKSTHVDEEAVSDTEANMDE
Query: RNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIRITDENTDDERECSEERK
CRECGGVGHYQ EC TF+RKQKKNF VTLSD+E DSRDDD NINAFTIRIT++NTDD+ ECS E K
Subjt: RNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIRITDENTDDERECSEERK
Query: NDELTIEKLEALWKEDC-----------------------------------------------------------------------------------
NDEL+IEKLE LWKEDC
Subjt: NDELTIEKLEALWKEDC-----------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGK
KT TVEI KNLCLKLQRE+ KKI RIRSDHGK
Subjt: --------------------------------------------------------------------KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGK
Query: EFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEM
EFDNE FNSFCLLEG H EFSAPITPQQNGVVE+KN LQEM RVMIHAKNLPLCF+AEAVNTA HIHNRVTIRT T + LYE W
Subjt: EFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEM
Query: TVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
KERK NVKYFHVFGSTCYILAD+EY +K DARSEQGIFL YSQ SRAYRVYNNRSDSVM+TIN INDLDS IK
Subjt: TVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| TYJ95661.1 gag-proteinase polyprotein [Cucumis melo var. makuwa] | 9.7e-134 | 54.48 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
MIFFIKMLDGKAWRALV YDPPMI VNGVSI K EVDWTDAEEQASVGNARA N IFN VDLNVFKLINSC+ AKEAWKTLE
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
Query: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
E +E TSK + ++ E YN+RVLEI NESLLLGEKIPDSKIVQK EAHDITTL+LDELFGSLLTFEMAT DR
Subjt: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
Query: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
+SKKGK IAFKSTHVDEEAVSDTEANMD E+ ++ + N N ++RRSDGYIKKK+GDRRIF+CRECG +GHYQ ECPTF+RKQ KNFCVTLS
Subjt: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
Query: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
DEESGDSRDDDDNINAFTIRITDEN DDE ECSEE K+DELTIEKLEALWKEDC+ + Q+E+ + +I +NE
Subjt: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
Query: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
I + + + NG + R+ ++ + F ++++ + H +IRT V + T Y C + P
Subjt: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
Query: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
T + +EYRQK DA+SEQ IFLGYSQNS YRV+NNRS SV++TINVVINDLDS IK
Subjt: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| TYJ98791.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 6.5e-154 | 56.56 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDPPMITVNGVSI KPEVDWT+ EEQA+VGNARA N IFNG+DLNVFKLINSCSTAKEAWKTL+ YEGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
+YN+RVLEI NESLLL EKIPDSKIV K EAHDITTL+LDELFGSLLTFEMATVDR+S
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
Query: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIR
+ T RNDDSLT+RNNENSDRRSDGYIKKK+GDRRIF+CRECGGV HYQ ECPTF+RKQK NFCVTLSD ESGD RDDD NINAFTI
Subjt: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIR
Query: ITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQNGV
ITDENT+DE ECSEE K+DELTIEKLEALWKEDC+ T++ + L + E +I +EF NE+ S +L + + + NG
Subjt: ITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQNGV
Query: VEKKN----MMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRK-------PNVKYFNVTE---------------------
K++ + + K +P E T R T++T + Y K ++ P + V +
Subjt: VEKKN----MMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRK-------PNVKYFNVTE---------------------
Query: ----MTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
MTVTL+EL K+RKPNVKYFHVFGSTCYILAD+EYRQK DA+SEQGIFLGYSQNSRAYRV+NNR SVM+TINVVIND+DS IK
Subjt: ----MTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| TYK02457.1 gag-proteinase polyprotein [Cucumis melo var. makuwa] | 3.1e-132 | 53.63 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDPPMITVNGVS+ KPEVDWTDAEEQASVGNARA NTIFNGVDLNVFKLINSCSTAKEAWKTLE EGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
+YN+RVLEI NESLLLGEKIPDSK+V+K EAHDITTLKLDELFGSLLTFEMAT +R+SKKGK IAFKS
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
Query: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYI---KKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAF
THV EAVS+TE+NMD+ ++ + + + +K+ FKCRECGGVGHYQ ECPT++RKQKKNF VTLSDEESGDSRDDD NINAF
Subjt: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYI---KKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAF
Query: TIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQ
TIRITD N++D+ ECSEE KND+LTIEK EALWKEDC+ ++ + L + E +I +EF NE+ S +L + +
Subjt: TIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQ
Query: NGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYE--LWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTC
NG L + V + F ++ + IH IRT T+ L + GRK +++ Y+L +E+ KY++ +
Subjt: NGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYE--LWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTC
Query: YIL--------ADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
++ +D+EYRQK DA+SEQGIFLGYSQN R YRV+NN S SVM+TINVVIND DS IK
Subjt: YIL--------ADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SWB7 Gag-proteinase polyprotein | 8.1e-134 | 54.48 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
MIFFIKMLDGKAWRALV YDPPMI VNGVSI K EVDWTDAEEQASVGNARA N IFN VDLNVFKLINSC+ AKEAWKTLE
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
Query: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
E +E TSK + ++ E YN+RVLEI NESLLLGEKIPDSKIVQK EAHDITTL+LDELFGSLLTFEMAT DR
Subjt: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
Query: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
+SKKGK IAFKSTHVDEEAVSDTEANMD E+ ++ + N N ++RRSDGYIKKK+GDRRIF+CRECG +GHYQ ECPTF+RKQ KNFCVTLS
Subjt: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
Query: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
DEESGDSRDDDDNINAFTIRITDEN DDE ECSEE K+DELTIEKLEALWKEDC+ + Q+E+ + +I +NE
Subjt: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
Query: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
I + + + NG + R+ ++ + F + ++ + H +IRT V + T Y C + P
Subjt: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
Query: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
T + +EYRQK DA+SEQ IFLGYSQNS YRV+NNRS SV++TINVVINDLDS IK
Subjt: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| A0A5A7TNK7 Gag-pol polyprotein | 1.8e-149 | 42.52 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDP MI VNGVSI KPEVDWTD EEQASVGNARA N IFNGVDLNVFKLIN CSTAKEAWKTLE YEGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQKEAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKSTHVDEEAVSDTEANMDE
+YN+ VLEI NESLLL I +EAHDITTLKLDELFGSLLTFEM T +R+SKKGK IAFKSTHV+EEA DTEANMDE
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQKEAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKSTHVDEEAVSDTEANMDE
Query: RNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIRITDENTDDERECSEERK
CRECGGVGHYQ EC TF+RKQKKNF VTLSD+E DSRDDD NINAFTIRIT++NTDD+ ECS E K
Subjt: RNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIRITDENTDDERECSEERK
Query: NDELTIEKLEALWKEDC-----------------------------------------------------------------------------------
NDEL+IEKLE LWKEDC
Subjt: NDELTIEKLEALWKEDC-----------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGK
KT TVEI KNLCLKLQRE+ KKI RIRSDHGK
Subjt: --------------------------------------------------------------------KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGK
Query: EFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEM
EFDNE FNSFCLLEG H EFSAPITPQQNGVVE+KN LQEM RVMIHAKNLPLCF+AEAVNTA HIHNRVTIRT T + LYE W
Subjt: EFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEM
Query: TVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
KERK NVKYFHVFGSTCYILAD+EY +K DARSEQGIFL YSQ SRAYRVYNNRSDSVM+TIN INDLDS IK
Subjt: TVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| A0A5D3BAM0 Gag-proteinase polyprotein | 4.7e-134 | 54.48 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
MIFFIKMLDGKAWRALV YDPPMI VNGVSI K EVDWTDAEEQASVGNARA N IFN VDLNVFKLINSC+ AKEAWKTLE
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLE-----------------
Query: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
E +E TSK + ++ E YN+RVLEI NESLLLGEKIPDSKIVQK EAHDITTL+LDELFGSLLTFEMAT DR
Subjt: ---EVYEG----TSKVKFSRLYE------YNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDR
Query: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
+SKKGK IAFKSTHVDEEAVSDTEANMD E+ ++ + N N ++RRSDGYIKKK+GDRRIF+CRECG +GHYQ ECPTF+RKQ KNFCVTLS
Subjt: DSKKGKRIAFKSTHVDEEAVSDTEANMD-------ERNDDSLTRRNNEN-SDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLS
Query: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
DEESGDSRDDDDNINAFTIRITDEN DDE ECSEE K+DELTIEKLEALWKEDC+ + Q+E+ + +I +NE
Subjt: DEESGDSRDDDDNINAFTIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLE
Query: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
I + + + NG + R+ ++ + F ++++ + H +IRT V + T Y C + P
Subjt: GIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKP
Query: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
T + +EYRQK DA+SEQ IFLGYSQNS YRV+NNRS SV++TINVVINDLDS IK
Subjt: NVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| A0A5D3BJA9 Gag-pol polyprotein | 3.1e-154 | 56.56 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDPPMITVNGVSI KPEVDWT+ EEQA+VGNARA N IFNG+DLNVFKLINSCSTAKEAWKTL+ YEGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
+YN+RVLEI NESLLL EKIPDSKIV K EAHDITTL+LDELFGSLLTFEMATVDR+S
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
Query: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIR
+ T RNDDSLT+RNNENSDRRSDGYIKKK+GDRRIF+CRECGGV HYQ ECPTF+RKQK NFCVTLSD ESGD RDDD NINAFTI
Subjt: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYIKKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAFTIR
Query: ITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQNGV
ITDENT+DE ECSEE K+DELTIEKLEALWKEDC+ T++ + L + E +I +EF NE+ S +L + + + NG
Subjt: ITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQNGV
Query: VEKKN----MMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRK-------PNVKYFNVTE---------------------
K++ + + K +P E T R T++T + Y K ++ P + V +
Subjt: VEKKN----MMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRTETIVILYELWKGRK-------PNVKYFNVTE---------------------
Query: ----MTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
MTVTL+EL K+RKPNVKYFHVFGSTCYILAD+EYRQK DA+SEQGIFLGYSQNSRAYRV+NNR SVM+TINVVIND+DS IK
Subjt: ----MTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| A0A5D3BSP9 Gag-proteinase polyprotein | 1.5e-132 | 53.63 | Show/hide |
Query: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
MIFFIK LDGKAWRALV GYDPPMITVNGVS+ KPEVDWTDAEEQASVGNARA NTIFNGVDLNVFKLINSCSTAKEAWKTLE EGTSKVK SRL
Subjt: MIFFIKMLDGKAWRALVEGYDPPMITVNGVSILKPEVDWTDAEEQASVGNARAPNTIFNGVDLNVFKLINSCSTAKEAWKTLEEVYEGTSKVKFSRLY--
Query: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
+YN+RVLEI NESLLLGEKIPDSK+V+K EAHDITTLKLDELFGSLLTFEMAT +R+SKKGK IAFKS
Subjt: ----------------EYNERVLEIENESLLLGEKIPDSKIVQK-----------------EAHDITTLKLDELFGSLLTFEMATVDRDSKKGKRIAFKS
Query: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYI---KKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAF
THV EAVS+TE+NMD+ ++ + + + +K+ FKCRECGGVGHYQ ECPT++RKQKKNF VTLSDEESGDSRDDD NINAF
Subjt: THVDEEAVSDTEANMDERNDDSLTRRNNENSDRRSDGYI---KKKDGDRRIFKCRECGGVGHYQVECPTFMRKQKKNFCVTLSDEESGDSRDDDDNINAF
Query: TIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQ
TIRITD N++D+ ECSEE KND+LTIEK EALWKEDC+ ++ + L + E +I +EF NE+ S +L + +
Subjt: TIRITDENTDDERECSEERKNDELTIEKLEALWKEDCKTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNES---FNSFCLLEGIHDEFSAPITPQQ
Query: NGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYE--LWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTC
NG L + V + F ++ + IH IRT T+ L + GRK +++ Y+L +E+ KY++ +
Subjt: NGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYH-IHNRVTIRTETIVILYE--LWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTC
Query: YIL--------ADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
++ +D+EYRQK DA+SEQGIFLGYSQN R YRV+NN S SVM+TINVVIND DS IK
Subjt: YIL--------ADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVMKTINVVINDLDSNIK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 8.6e-16 | 25.46 | Show/hide |
Query: CKTYTVE-------IYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEA
C TY ++ ++++ K + K++ + D+G+E+ + FC+ +GI + P TPQ NGV E+ + E R M+ L FW EA
Subjt: CKTYTVE-------IYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEA
Query: VNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYN
V TA ++ NR+ R + + + T YE+ +KP +K+ VFG+T Y+ + + K D +S + IF+GY N +++++
Subjt: VNTAYHIHNRVTIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYN
Query: NRSDSVMKTINVVIND
++ + +VV+++
Subjt: NRSDSVMKTINVVIND
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-19 | 29.19 | Show/hide |
Query: KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIH
K ++++ ++RE G+K+ R+RSD+G E+ + F +C GI E + P TPQ NGV E+ N + E R M+ LP FW EAV TA ++
Subjt: KTYTVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIH
Query: NRVTIRTETIVILYELWKGRKPNVKY-FNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVM
N R P+V F + E T ++ + + VFG + +E R K D +S IF+GY YR+++ V+
Subjt: NRVTIRTETIVILYELWKGRKPNVKY-FNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAYRVYNNRSDSVM
Query: KTINVVIND
++ +VV +
Subjt: KTINVVIND
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.6e-06 | 27.07 | Show/hide |
Query: YKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRT
+KNL L+ +I SD+G EF + + GI S P TP+ NG+ E+K+ + E ++ ++P +W A A ++ NR+
Subjt: YKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRVTIRT
Query: ETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAY
L + P K F + PN VFG CY + K D +S Q +FLGYS AY
Subjt: ETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.3e-07 | 26.49 | Show/hide |
Query: TVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRV
T I+K+L ++ +I + SD+G EF + GI S P TP+ NG+ E+K+ + EM ++ ++P +W A + A ++ NR+
Subjt: TVEIYKNLCLKLQREKGKKIIRIRSDHGKEFDNESFNSFCLLEGIHDEFSAPITPQQNGVVEKKNMMLQEMTRVMIHAKNLPLCFWAEAVNTAYHIHNRV
Query: TIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAY
L + + P K F + PN + VFG CY R K + +S+Q F+GYS AY
Subjt: TIRTETIVILYELWKGRKPNVKYFNVTEMTVTLYELCKERKPNVKYFHVFGSTCYILADQEYRQKRDARSEQGIFLGYSQNSRAY
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