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Pay0006351 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006351
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionU3 small nucleolar RNA-associated protein 25-like
Genome locationchr04:21358673..21359571
RNA-Seq ExpressionPay0006351
SyntenyPay0006351
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017217096.1 PREDICTED: uncharacterized protein LOC108194653 [Daucus carota subsp. sativus]3.2e-4351.76Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKTLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGRGRNRGRGRDRGRERSNYTLRGNNHLD
        MIFLR HLHE LK EYLTVKDP ELW++LK+RYDH+KT    NHESRPTG++PFP+ANV   N    RG G GRG NRGR R  G       ++ +    
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKTLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGRGRNRGRGRDRGRERSNYTLRGNNHLD

Query:  FKKT-TNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQ--DDVFDPSNMTHLDVADFLESLEEKNDVNE
        F K+  N    +   + KK K+ EN+C+RCGM GHW+RTC T KHLVDLYQ SLK+K KN+E N  ++  D V +   MT+LD  DF E+ ++    N+
Subjt:  FKKT-TNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQ--DDVFDPSNMTHLDVADFLESLEEKNDVNE

XP_027071560.1 uncharacterized protein LOC113696331 [Coffea arabica]7.7e-4550.45Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVV-FLNNINSRGRGR-
        MIFLR HL EGLK+EYLTVKDP  LW+ LKER+DH K                           LL+KNHESRPTGA+PFP+ANV  F N+   RGRGR 
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVV-FLNNINSRGRGR-

Query:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDV
         GRGR+RGRGR RGR+ S +  R N     ++  + +      P+  + K  E +C+RCGM GHW+RTC T+KHLVDLYQ SLK+K K+VE NF  Q + 
Subjt:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDV

Query:  F--DPSNMTHLDVADFLESLEE
        +  D ++MTHLD+ADF E  E+
Subjt:  F--DPSNMTHLDVADFLESLEE

XP_027102933.1 uncharacterized protein LOC113724206 [Coffea arabica]1.7e-4451.09Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK-------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR--
        MIFLR HL EGLK+EYLTVKDP  LW+ LKER+DH K                          LL+KNHESRPTGA+PFP+AN   F N+   RG GR  
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK-------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR--

Query:  GRGRNRGRGRDRGRERSNYTLRGN------NHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAY
        GRGR RG GR RGR+RS +  R N       ++  K+  N D     P+N + K  E +C+RCGM GHW+RTC T++HLVDLYQ SLK+K KNVE NF  
Subjt:  GRGRNRGRGRDRGRERSNYTLRGN------NHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAY

Query:  QD---DVFDPSNMTHLDVADFLESLEEKN
        Q    D  D ++MTHLDVADF E  E+ N
Subjt:  QD---DVFDPSNMTHLDVADFLESLEEKN

XP_027155338.1 U3 small nucleolar RNA-associated protein 25-like [Coffea eugenioides]5.0e-4450.9Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR-
        MIFLR HL EGLK+EYLTVKDP  LW+ LKER+DH K                           LL+KNHESRPTGA+PFP+AN   F N+   RGRGR 
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR-

Query:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQ--D
         GRGR+RGRGR RGR+ S +  R N     ++  + +      P+  + K  E +C+RCGM GHW+RTC T++HLVDLYQ SLK+K K+VE NF  Q  D
Subjt:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQ--D

Query:  DVFDPSNMTHLDVADFLESLEE
        D  D ++MTHLDVADF E  E+
Subjt:  DVFDPSNMTHLDVADFLESLEE

XP_030478151.1 uncharacterized protein LOC115695209 [Cannabis sativa]3.2e-4347.64Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKT-----------------------LLIKNHESRPTGATPFPKANVVFLNNIN-SRGRGRGRGR
        MIFLRHHLHE LK EYLTVKDP  LWQ+LKERYDH+KT                       LL+KNHESRPTG+ PFP+ N   ++N N SR R   R  
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKT-----------------------LLIKNHESRPTGATPFPKANVVFLNNIN-SRGRGRGRGR

Query:  NRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDVF--DPS
         RGR  +R           N++   K TT  +++ K PQN   ++ EN C RCG+ GHW R C T+KHL +LYQ S+K K K +E NFAYQDD F  +P 
Subjt:  NRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDVF--DPS

Query:  NMTHLDVADFLESLEEKNDVNEGVANTSFNYDN
        ++THLDVADF          NE + N + N DN
Subjt:  NMTHLDVADFLESLEEKNDVNEGVANTSFNYDN

TrEMBL top hitse value%identityAlignment
A0A6J1DDU8 uncharacterized protein LOC1110201418.6e-4255.98Show/hide
Query:  DHKKTLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGRGRNRGRGRDRGRERSNYTLRGN--NHLDFKKTT-NDDHRRKTPQNKKIKSGENQCFRCG
        +    LL+KN ESRPTGATPF +AN V  NN       RGRGR RGRGRDRGR R+N++  G   N  +FK+TT N DH+ KTPQ++  +S EN+CFRCG
Subjt:  DHKKTLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGRGRNRGRGRDRGRERSNYTLRGN--NHLDFKKTT-NDDHRRKTPQNKKIKSGENQCFRCG

Query:  MNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQD-DVFDPSNMTHLDVADFLESLEEK---NDVNEGVANTSFNYDNVQN
        M GHW   C T KHLVDLYQ SLKEK  NVE N AY D D+FD +N+T LDV DFLES  E+       +G+A+ SF++ N+QN
Subjt:  MNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQD-DVFDPSNMTHLDVADFLESLEEK---NDVNEGVANTSFNYDNVQN

A0A6P4NLU7 uncharacterized protein LOC1084817021.4e-3945.57Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKT----------------------------------LLIKNHESRPTGATPFPKANVVFLN---
        MIFLRHHLHEGLK +YLTVKDP  LW +LKERYDH+KT                                  LL+KNHE RPTG+ PFP+ANV   N   
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKT----------------------------------LLIKNHESRPTGATPFPKANVVFLN---

Query:  -------NINSRGRGRGRGRNRGRGRDRGRERSNYTLRG--NNHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLK
               N + RGRG GRGR RGRGR RG +R  Y   G   N   ++K    +  R+  + +K ++  N C+RCG  GHW+R C   KHLVDLY+ S+K
Subjt:  -------NINSRGRGRGRGRNRGRGRDRGRERSNYTLRG--NNHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLK

Query:  EKRKNVEVNFAYQDDV--FDPSNMTHLDVADFLESLE
        +K + VE N  Y+D    FD  N THL+VA+FL +LE
Subjt:  EKRKNVEVNFAYQDDV--FDPSNMTHLDVADFLESLE

A0A6P6T0E9 uncharacterized protein LOC1136963313.7e-4550.45Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVV-FLNNINSRGRGR-
        MIFLR HL EGLK+EYLTVKDP  LW+ LKER+DH K                           LL+KNHESRPTGA+PFP+ANV  F N+   RGRGR 
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVV-FLNNINSRGRGR-

Query:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDV
         GRGR+RGRGR RGR+ S +  R N     ++  + +      P+  + K  E +C+RCGM GHW+RTC T+KHLVDLYQ SLK+K K+VE NF  Q + 
Subjt:  -GRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDV

Query:  F--DPSNMTHLDVADFLESLEE
        +  D ++MTHLD+ADF E  E+
Subjt:  F--DPSNMTHLDVADFLESLEE

A0A6P6V0S9 uncharacterized protein LOC1137161991.1e-4148.4Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGR
        MIFLR HL+EGLK+EYLTVKDP  LW  LKER+DH K                           LL+KNHESRPT A+PFP+AN     N + RGRGR R
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK--------------------------TLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGR

Query:  GRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDVF--
          NR R R R R+RS +  R N H D ++  + +      P+ ++ K  E +C+RCGM GHW+RTC T++HLVDLYQ SLK+K K+VE NF  Q + +  
Subjt:  GRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHRRK-TPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDVF--

Query:  DPSNMTHLDVADFLESLEE
        D ++MTHLD+ADF E  E+
Subjt:  DPSNMTHLDVADFLESLEE

A0A6P6VIX9 uncharacterized protein LOC1137242068.3e-4551.09Show/hide
Query:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK-------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR--
        MIFLR HL EGLK+EYLTVKDP  LW+ LKER+DH K                          LL+KNHESRPTGA+PFP+AN   F N+   RG GR  
Subjt:  MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKK-------------------------TLLIKNHESRPTGATPFPKAN-VVFLNNINSRGRGR--

Query:  GRGRNRGRGRDRGRERSNYTLRGN------NHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAY
        GRGR RG GR RGR+RS +  R N       ++  K+  N D     P+N + K  E +C+RCGM GHW+RTC T++HLVDLYQ SLK+K KNVE NF  
Subjt:  GRGRNRGRGRDRGRERSNYTLRGN------NHLDFKKTTNDDHRRKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAY

Query:  QD---DVFDPSNMTHLDVADFLESLEEKN
        Q    D  D ++MTHLDVADF E  E+ N
Subjt:  QD---DVFDPSNMTHLDVADFLESLEEKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGGTAAAAGATCCAGATGAACTATGGCAAAGTTTAAAAGAAAGGTATGATCATAAAAA
AACTTTATTAATAAAAAACCATGAATCTCGACCAACTGGAGCAACACCATTCCCTAAAGCAAATGTTGTATTTTTAAATAATATTAATAGTCGAGGTCGAGGTCGAGGTC
GTGGTCGTAATCGTGGTCGAGGTCGTGACCGTGGTAGAGAAAGAAGTAATTATACTTTACGTGGTAATAATCATTTAGATTTCAAGAAAACCACAAATGATGATCATAGA
AGGAAGACTCCACAAAATAAGAAAATTAAAAGTGGTGAAAATCAATGCTTCCGTTGTGGTATGAATGGTCATTGGACTCGTACTTGTCATACATCCAAGCACTTAGTCGA
CCTCTATCAAACCTCATTGAAGGAAAAAAGGAAGAATGTAGAAGTAAACTTTGCCTATCAAGATGATGTATTTGACCCTTCCAACATGACCCATTTGGATGTGGCAGACT
TCTTGGAGTCTCTTGAAGAGAAAAATGATGTTAATGAAGGAGTAGCAAATACTTCCTTTAATTATGATAATGTACAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTCCTTCGACATCATCTTCATGAGGGACTAAAGATTGAATATCTTACGGTAAAAGATCCAGATGAACTATGGCAAAGTTTAAAAGAAAGGTATGATCATAAAAA
AACTTTATTAATAAAAAACCATGAATCTCGACCAACTGGAGCAACACCATTCCCTAAAGCAAATGTTGTATTTTTAAATAATATTAATAGTCGAGGTCGAGGTCGAGGTC
GTGGTCGTAATCGTGGTCGAGGTCGTGACCGTGGTAGAGAAAGAAGTAATTATACTTTACGTGGTAATAATCATTTAGATTTCAAGAAAACCACAAATGATGATCATAGA
AGGAAGACTCCACAAAATAAGAAAATTAAAAGTGGTGAAAATCAATGCTTCCGTTGTGGTATGAATGGTCATTGGACTCGTACTTGTCATACATCCAAGCACTTAGTCGA
CCTCTATCAAACCTCATTGAAGGAAAAAAGGAAGAATGTAGAAGTAAACTTTGCCTATCAAGATGATGTATTTGACCCTTCCAACATGACCCATTTGGATGTGGCAGACT
TCTTGGAGTCTCTTGAAGAGAAAAATGATGTTAATGAAGGAGTAGCAAATACTTCCTTTAATTATGATAATGTACAAAACTAA
Protein sequenceShow/hide protein sequence
MIFLRHHLHEGLKIEYLTVKDPDELWQSLKERYDHKKTLLIKNHESRPTGATPFPKANVVFLNNINSRGRGRGRGRNRGRGRDRGRERSNYTLRGNNHLDFKKTTNDDHR
RKTPQNKKIKSGENQCFRCGMNGHWTRTCHTSKHLVDLYQTSLKEKRKNVEVNFAYQDDVFDPSNMTHLDVADFLESLEEKNDVNEGVANTSFNYDNVQN