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Pay0006421 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006421
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionReverse transcriptase
Genome locationchr10:24426002..24427226
RNA-Seq ExpressionPay0006421
SyntenyPay0006421
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035429.1 uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa]1.7e-6269.31Show/hide
Query:  SYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIHCQARGNIEDVLVKVD
        SY+KFLKDIL KKR+INDFE + LTQAT+D  KN VPEKM D           GMDLGCALCDLG +INL PLSIFKK+  GE      G IEDVLVKVD
Subjt:  SYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIHCQARGNIEDVLVKVD

Query:  KFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYYGRFN
        KFLF  DFVILDYK + +VPIILGR F STSC LI VHQ ELTM FNDEEIKFNVV  MKFP DVENY+ I+S GWDYC+E+AYY  FN
Subjt:  KFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYYGRFN

KAA0065469.1 uncharacterized protein E6C27_scaffold17G001650 [Cucumis melo var. makuwa]1.3e-9987.27Show/hide
Query:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH
        LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQA SDVLKNRVPEKMIDL          GMDLGCALCDLGETINLRPLSIFKKLETGE  
Subjt:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH

Query:  CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYY
                     VDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYN IESLGWDYCKEKAYY
Subjt:  CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYY

Query:  GRFNIGEFLKIDEPDYILEE
        GRFNIGEFLKIDEP+YILEE
Subjt:  GRFNIGEFLKIDEPDYILEE

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]2.2e-4658.95Show/hide
Query:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------
        +PSY KFL DIL KKRRINDF+ M L QATSD+ KN V EKM           ID GMDLG  LCDLG +INL PLSIFKKL+  E+             
Subjt:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------

Query:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESL
            +G IEDVLVKVDKFLF  DF+ILDY+ + EV IIL RLF ST  AL  +HQ ELT+ FN++EIKFNV+N MKFP+D E+ NTIESL
Subjt:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESL

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]1.2e-4445.8Show/hide
Query:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH
        LHI+IP V ALEQ+P+YVKFLKDIL KKRR+ +FE + LT+  S +LK+++P K+ D           G D+G ALCDLG +INL P+SIFKKL  GE  
Subjt:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH

Query:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTI-
                         G IEDVLV+VDKF+F  DF+ILDY+ + +VPIILGR F +T   LIDV   ELTMR ND+++ FNV N M+FP ++E  + I 
Subjt:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTI-

Query:  -------ESLGWDYCKEKAYYGRFNIGEFLKIDEPDYI
               E    +  K++ +   F+  E L  DE + +
Subjt:  -------ESLGWDYCKEKAYYGRFNIGEFLKIDEPDYI

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]6.4e-4646.22Show/hide
Query:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH
        LHI+IP V ALEQ+ +YVKFLKDIL KKRR+ +FE + LT+  S +LK+++P K+ D           G D+G ALCDLG +INL P+SIFKKL  GE  
Subjt:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH

Query:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTI-
                         G IEDVLV+VDKF+F  DF+ILDY+ + +VPIILGR F +T   LIDV  EELTMR ND+++ FNV N M+FP ++E  + I 
Subjt:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTI-

Query:  -------ESLGWDYCKEKAYYGRFNIGEFLKIDEPDYI
               E    + CK++ +   F+  E L  DE + +
Subjt:  -------ESLGWDYCKEKAYYGRFNIGEFLKIDEPDYI

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900551.1e-4658.95Show/hide
Query:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------
        +PSY KFL DIL KKRRINDF+ M L QATSD+ KN V EKM           ID GMDLG  LCDLG +INL PLSIFKKL+  E+             
Subjt:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------

Query:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESL
            +G IEDVLVKVDKFLF  DF+ILDY+ + EV IIL RLF ST  AL  +HQ ELT+ FN++EIKFNV+N MKFP+D E+ NTIESL
Subjt:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESL

A0A5A7VJ95 Uncharacterized protein1.7e-4454.68Show/hide
Query:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH
        +HI+I F+ ALEQ           + KK R ND E + LT  TSD+LKN  P+KM D            MDLG  LCDLG +INL PLSIFKKLE  E+ 
Subjt:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH

Query:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIE
                      +  G IED+LVKVDKFLF  DF+ILDY+ N EVPII GR F ST  ALIDVHQ ELTMRFND E+KFNV+N MKFP D +NY+ IE
Subjt:  -------------CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIE

Query:  SLG
        SLG
Subjt:  SLG

A0A5D3BDT2 RT_RNaseH domain-containing protein2.9e-4448.36Show/hide
Query:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------
        +PSY KFL DIL KKRRINDF+ M L QATSD+ KN V EKM           ID GMDLG  LCDLG +INL PLSIFKKL+  E+             
Subjt:  VPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKM-----------IDLGMDLGCALCDLGETINLRPLSIFKKLETGEIH------------

Query:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIE------------
            +G IEDVLVKVDKFLF  DF+ILDY+ + EV IIL RLF ST  AL  +HQ ELT+ FN++EIKFNV+N MKFP+D E+  T +            
Subjt:  -CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIE------------

Query:  ----SLGWDYCKEKAYYGRFNIGEFLKIDEPDYILEEVNQRRKE
             L ++Y  E      F I   L  +E + +L  + Q +KE
Subjt:  ----SLGWDYCKEKAYYGRFNIGEFLKIDEPDYILEEVNQRRKE

A0A5D3CA15 Uncharacterized protein6.3e-10087.27Show/hide
Query:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH
        LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQA SDVLKNRVPEKMIDL          GMDLGCALCDLGETINLRPLSIFKKLETGE  
Subjt:  LHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIH

Query:  CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYY
                     VDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYN IESLGWDYCKEKAYY
Subjt:  CQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYY

Query:  GRFNIGEFLKIDEPDYILEE
        GRFNIGEFLKIDEP+YILEE
Subjt:  GRFNIGEFLKIDEPDYILEE

A0A5D3DPZ2 Uncharacterized protein8.1e-6369.31Show/hide
Query:  SYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIHCQARGNIEDVLVKVD
        SY+KFLKDIL KKR+INDFE + LTQAT+D  KN VPEKM D           GMDLGCALCDLG +INL PLSIFKK+  GE      G IEDVLVKVD
Subjt:  SYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDL----------GMDLGCALCDLGETINLRPLSIFKKLETGEIHCQARGNIEDVLVKVD

Query:  KFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYYGRFN
        KFLF  DFVILDYK + +VPIILGR F STSC LI VHQ ELTM FNDEEIKFNVV  MKFP DVENY+ I+S GWDYC+E+AYY  FN
Subjt:  KFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYYGRFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGTCCTTATGCAGAGCCAGGCCTCATCCATAAAGAATCTAGAGATGCAACTGGGGCAACTAGCCAGTGACATCTTTTTACACATCCACATCCCATTTGTTTA
TGCATTAGAGCAAGTGCCTTCCTATGTCAAGTTCTTGAAAGACATCTTGGGGAAGAAGAGGAGGATTAATGATTTTGAAATTATGACTTTAACGCAGGCAACAAGTGATG
TCCTTAAGAATAGGGTGCCAGAGAAGATGATAGACCTTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGAAACCATCAACTTGAGGCCTCTTTCTATCTTCAAG
AAATTAGAGACAGGGGAGATCCATTGCCAAGCTAGAGGCAACATTGAAGATGTTTTGGTAAAGGTGGATAAGTTTTTGTTCCTCGTTGACTTCGTTATTCTGGATTACAA
AGAAAATCTAGAGGTTCCAATTATTTTGGGGCGGCTATTCCCATCAACTAGTTGCGCCCTCATAGACGTCCACCAAGAGGAGTTGACAATGCGTTTTAATGATGAAGAGA
TTAAGTTCAACGTTGTTAACGTGATGAAGTTCCCTATCGATGTTGAAAACTACAACACAATAGAGTCCCTTGGATGGGACTATTGCAAGGAAAAAGCCTATTATGGGCGG
TTTAACATTGGTGAATTCCTTAAAATAGATGAACCAGACTATATACTAGAAGAAGTAAACCAAAGGCGAAAAGAAGACAAAGCCATCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGTCCTTATGCAGAGCCAGGCCTCATCCATAAAGAATCTAGAGATGCAACTGGGGCAACTAGCCAGTGACATCTTTTTACACATCCACATCCCATTTGTTTA
TGCATTAGAGCAAGTGCCTTCCTATGTCAAGTTCTTGAAAGACATCTTGGGGAAGAAGAGGAGGATTAATGATTTTGAAATTATGACTTTAACGCAGGCAACAAGTGATG
TCCTTAAGAATAGGGTGCCAGAGAAGATGATAGACCTTGGAATGGATTTAGGTTGTGCTCTATGCGACCTTGGGGAAACCATCAACTTGAGGCCTCTTTCTATCTTCAAG
AAATTAGAGACAGGGGAGATCCATTGCCAAGCTAGAGGCAACATTGAAGATGTTTTGGTAAAGGTGGATAAGTTTTTGTTCCTCGTTGACTTCGTTATTCTGGATTACAA
AGAAAATCTAGAGGTTCCAATTATTTTGGGGCGGCTATTCCCATCAACTAGTTGCGCCCTCATAGACGTCCACCAAGAGGAGTTGACAATGCGTTTTAATGATGAAGAGA
TTAAGTTCAACGTTGTTAACGTGATGAAGTTCCCTATCGATGTTGAAAACTACAACACAATAGAGTCCCTTGGATGGGACTATTGCAAGGAAAAAGCCTATTATGGGCGG
TTTAACATTGGTGAATTCCTTAAAATAGATGAACCAGACTATATACTAGAAGAAGTAAACCAAAGGCGAAAAGAAGACAAAGCCATCAATTAA
Protein sequenceShow/hide protein sequence
MLFVLMQSQASSIKNLEMQLGQLASDIFLHIHIPFVYALEQVPSYVKFLKDILGKKRRINDFEIMTLTQATSDVLKNRVPEKMIDLGMDLGCALCDLGETINLRPLSIFK
KLETGEIHCQARGNIEDVLVKVDKFLFLVDFVILDYKENLEVPIILGRLFPSTSCALIDVHQEELTMRFNDEEIKFNVVNVMKFPIDVENYNTIESLGWDYCKEKAYYGR
FNIGEFLKIDEPDYILEEVNQRRKEDKAIN