; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006430 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006430
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRibonuclease H
Genome locationchr08:27948863..27949408
RNA-Seq ExpressionPay0006430
SyntenyPay0006430
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]1.3e-9391.71Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETR AKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

KAA0046213.1 uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]1.0e-9391.16Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETR AKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

KAA0067952.1 uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa]4.9e-9693.92Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPYIQYVTKLSQNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

TYK21789.1 uncharacterized protein E5676_scaffold1721G00450 [Cucumis melo var. makuwa]9.2e-9592.82Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPYIQYVTKLSQNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

TYK24459.1 uncharacterized protein E5676_scaffold717G00160 [Cucumis melo var. makuwa]2.4e-9592.82Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

TrEMBL top hitse value%identityAlignment
A0A5A7T7R4 Ribonuclease H6.4e-9491.71Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL H IGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETR AKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

A0A5A7TRL7 Ribonuclease H4.9e-9491.16Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGL+VACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETR AKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL +MFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

A0A5A7VHZ0 Uncharacterized protein2.4e-9693.92Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPYIQYVTKLSQNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

A0A5D3DEM4 RNase H domain-containing protein4.4e-9592.82Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGI VVLISPEGK+FPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPYIQYVTKLSQNFEKISF+HV +EDN+M +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

A0A5D3DMD2 Ribonuclease H1.2e-9592.82Show/hide
Query:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
        MRIDFPD+NIFLVEKNA+DHETWTMLFDGASNEL HGIGVVLISPEGKVFPLT KLCFECTHNI EYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE
Subjt:  MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKE

Query:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW
        EWETRDAKLVPY QYVTKLSQNFEKISFDHVPREDNRM +ALATL VMFDLN+EFELHPI+ITKRDVPAYC+ VGNDNKPW
Subjt:  EWETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein1.7e-0931.72Show/hide
Query:  PDENIFLVEKNAK-DHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEW
        P E +  VE +A    ET  + FDGAS  N    G   VL + +G +     +     T+N  EY A I+GL+ A +   K +KV GDS LV  Q+K +W
Subjt:  PDENIFLVEKNAK-DHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEW

Query:  ETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVV
        +     L    +    L          HV R  N   +  A L V
Subjt:  ETRDAKLVPYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-1431.82Show/hide
Query:  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQY
        + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+ A D   K + VLGDSMLV  QV+  W+T   K+    + 
Subjt:  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQY

Query:  VTKLSQNFEKISFDHVPREDNRMTEALATLVV
          +L  +F+     H+ RE N   +  A   +
Subjt:  VTKLSQNFEKISFDHVPREDNRMTEALATLVV

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.8e-1431.82Show/hide
Query:  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQY
        + +++ T+ FDGAS  N  + G G VL + +  V     +     T+N+ EY A ++GL+ A D   K + VLGDSMLV  QV+  W+T   K+    + 
Subjt:  KDHETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQY

Query:  VTKLSQNFEKISFDHVPREDNRMTEALATLVV
          +L  +F+     H+ RE N   +  A   +
Subjt:  VTKLSQNFEKISFDHVPREDNRMTEALATLVV

AT5G51080.1 RNase H family protein5.9e-0729.69Show/hide
Query:  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVT
        +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L    +   
Subjt:  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVT

Query:  KLSQNFEKISFDHVPREDNRMTEALATL
        +LS         HV R  N   +  A +
Subjt:  KLSQNFEKISFDHVPREDNRMTEALATL

AT5G51080.2 RNase H family protein5.9e-0729.69Show/hide
Query:  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVT
        +ET  + FDGAS  N    G   VL + +G +     +     T+N  EY   I+GL+ A +    K+KV  DS LV  Q+K +W+     L    +   
Subjt:  HETWTMLFDGAS--NELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLVPYIQYVT

Query:  KLSQNFEKISFDHVPREDNRMTEALATL
        +LS         HV R  N   +  A +
Subjt:  KLSQNFEKISFDHVPREDNRMTEALATL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGG
GATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGAC
TTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTA
CCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGT
GATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATTGATTTCCCGGATGAAAACATATTTCTAGTTGAAAAGAATGCTAAAGATCATGAGACATGGACTATGCTTTTCGATGGTGCCTCAAATGAGCTGGAACATGG
GATTGGAGTTGTGCTAATTTCTCCAGAAGGAAAGGTTTTCCCCCTAACGACCAAGTTATGTTTTGAATGCACTCACAATATCGTTGAATATGAAGCTTGCATTATGGGAC
TTCAAGTAGCATGCGATATGAGTATTAAAAAGTTGAAAGTTTTAGGTGACTCGATGTTAGTGATACATCAAGTAAAGGAAGAATGGGAAACAAGAGATGCTAAATTGGTA
CCTTACATCCAATACGTTACAAAATTGTCTCAAAATTTTGAAAAGATTTCATTTGACCATGTCCCTAGGGAAGACAATCGAATGACAGAAGCATTAGCCACCTTGGTAGT
GATGTTTGATCTTAATATTGAATTTGAACTTCATCCAATCAAAATTACAAAGCGAGATGTGCCAGCATATTGCATATATGTTGGAAATGATAACAAGCCATGGTAA
Protein sequenceShow/hide protein sequence
MRIDFPDENIFLVEKNAKDHETWTMLFDGASNELEHGIGVVLISPEGKVFPLTTKLCFECTHNIVEYEACIMGLQVACDMSIKKLKVLGDSMLVIHQVKEEWETRDAKLV
PYIQYVTKLSQNFEKISFDHVPREDNRMTEALATLVVMFDLNIEFELHPIKITKRDVPAYCIYVGNDNKPW