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Pay0006440 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006440
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionTransposon Tf2-6 polyprotein
Genome locationchr11:25881747..25881968
RNA-Seq ExpressionPay0006440
SyntenyPay0006440
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047225.1 reverse transcriptase [Cucumis melo var. makuwa]3.6e-2680.82Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        M+EH+ HLE+V EVLREHKLYANKKKCSFA+QRVEYLGHIVS +GVE DP+KI+SIKQ PVP+NVRE+RGFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

KAA0059954.1 retrotransposon polyprotein [Cucumis melo var. makuwa]1.0e-2891.55Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGF
        MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVS QGVEADPEKIKSIKQWPVPSN+ +L  F
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGF

KAA0061363.1 peroxidase 64 [Cucumis melo var. makuwa]3.5e-2989.04Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        MEEHIYHLELV EVLREHKLYANKKKCSFAFQ+VEYLGHIVSGQGVE DPEK +SIKQW VP+NVREL GFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

KAA0068083.1 peroxidase 64 [Cucumis melo var. makuwa]7.3e-2787.67Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        +EEHIYHLELV EVLREHKLYAN KKCSFAFQ+VEYLGHIVS QGVE DPEKI+SIKQW VP+NVRELRGFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

TYK17139.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]6.4e-3193.15Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        MEEH+YHLELVFEVLREHKLY N KKCSFAFQRVEYLGHIVSGQGVEAD EKIKSIKQWPVPSNVRELRGF G
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

TrEMBL top hitse value%identityAlignment
A0A5A7U0Q5 Reverse transcriptase1.8e-2680.82Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        M+EH+ HLE+V EVLREHKLYANKKKCSFA+QRVEYLGHIVS +GVE DP+KI+SIKQ PVP+NVRE+RGFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

A0A5A7UY29 Retrotransposon polyprotein5.0e-2991.55Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGF
        MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVS QGVEADPEKIKSIKQWPVPSN+ +L  F
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGF

A0A5A7VJ08 Peroxidase 643.6e-2787.67Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        +EEHIYHLELV EVLREHKLYAN KKCSFAFQ+VEYLGHIVS QGVE DPEKI+SIKQW VP+NVRELRGFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

A0A5D3CU29 Peroxidase 641.7e-2989.04Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        MEEHIYHLELV EVLREHKLYANKKKCSFAFQ+VEYLGHIVSGQGVE DPEK +SIKQW VP+NVREL GFLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

A0A5D3D379 Putative retroelement pol polyprotein3.1e-3193.15Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        MEEH+YHLELVFEVLREHKLY N KKCSFAFQRVEYLGHIVSGQGVEAD EKIKSIKQWPVPSNVRELRGF G
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.65.9e-1138.36Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        ++EH+  L LVFE L +  L     KC F  Q   +LGH+++  G++ +PEKI++I+++P+P+  +E++ FLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

P10401 Retrovirus-related Pol polyprotein from transposon gypsy8.5e-1039.44Show/hide
Query:  EHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        +H+ H++ V + L +  +  +++K  F  + VEYLG IVS  G ++DPEK+K+I+++P P  V ++R FLG
Subjt:  EHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

P20825 Retrovirus-related Pol polyprotein from transposon 2971.9e-0936.99Show/hide
Query:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        + EH+  ++LVF  L +  L     KC F  +   +LGHIV+  G++ +P K+K+I  +P+P+  +E+R FLG
Subjt:  MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

P92523 Uncharacterized mitochondrial protein AtMg008601.3e-1550.72Show/hide
Query:  HLELVFEVLREHKLYANKKKCSFAFQRVEYLG--HIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        HL +V ++  +H+ YAN+KKC+F   ++ YLG  HI+SG+GV ADP K++++  WP P N  ELRGFLG
Subjt:  HLELVFEVLREHKLYANKKKCSFAFQRVEYLG--HIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.9e-0940.28Show/hide
Query:  EEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        + H  +L LV   L +  L  N +K  F   +VE+LG+IV+  G++ADP+K+++I + P P++V+EL+ FLG
Subjt:  EEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein9.6e-1750.72Show/hide
Query:  HLELVFEVLREHKLYANKKKCSFAFQRVEYLG--HIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG
        HL +V ++  +H+ YAN+KKC+F   ++ YLG  HI+SG+GV ADP K++++  WP P N  ELRGFLG
Subjt:  HLELVFEVLREHKLYANKKKCSFAFQRVEYLG--HIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCATATATATCATTTAGAGCTGGTGTTTGAAGTATTACGTGAACATAAGCTTTATGCTAACAAGAAGAAGTGCAGTTTTGCTTTTCAAAGAGTAGAA
TATCTTGGCCACATTGTTTCAGGTCAAGGGGTGGAAGCGGATCCGGAGAAAATTAAATCCATTAAACAGTGGCCAGTTCCTTCCAACGTGAGAGAATTACGGGGA
TTTTTGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCATATATATCATTTAGAGCTGGTGTTTGAAGTATTACGTGAACATAAGCTTTATGCTAACAAGAAGAAGTGCAGTTTTGCTTTTCAAAGAGTAGAA
TATCTTGGCCACATTGTTTCAGGTCAAGGGGTGGAAGCGGATCCGGAGAAAATTAAATCCATTAAACAGTGGCCAGTTCCTTCCAACGTGAGAGAATTACGGGGA
TTTTTGGGCTGA
Protein sequenceShow/hide protein sequence
MEEHIYHLELVFEVLREHKLYANKKKCSFAFQRVEYLGHIVSGQGVEADPEKIKSIKQWPVPSNVRELRGFLG