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Pay0006500 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006500
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionAnaphase-promoting complex subunit 13
Genome locationchr11:5792107..5794904
RNA-Seq ExpressionPay0006500
SyntenyPay0006500
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
GO:0070979 - protein K11-linked ubiquitination (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR008401 - Apc13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042977.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]1.2e-7797.42Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLK HPSLSSL ARFPRRHSSSSVAHY LTTHWHSRSLR LVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL

KGN63398.1 hypothetical protein Csa_022587 [Cucumis sativus]7.8e-6686.84Show/hide
Query:  KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

TYK11109.1 anaphase-promoting complex subunit 13 isoform X2 [Cucumis melo var. makuwa]2.5e-80100Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL

XP_004148091.1 anaphase-promoting complex subunit 13 [Cucumis sativus]1.6e-2698.41Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

XP_008459198.1 PREDICTED: uncharacterized protein LOC103498390 [Cucumis melo]3.5e-82100Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNL0 Anaphase-promoting complex subunit 133.8e-6686.84Show/hide
Query:  KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILID
        +++  +PVLN  PQL LHPSLSSL+ARFPR HSSSSV HY LTTH HSRSLR LVGDLSQIRLH V+ALRSLTPT ILGFR YLNKKTPMAELSLGILID
Subjt:  KEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILID

Query:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQE+QPVDTDTWHDLALGNQ
Subjt:  ILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

A0A1S3CA59 Anaphase-promoting complex subunit 131.7e-82100Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

A0A5A7TMF9 Anaphase-promoting complex subunit 135.6e-7897.42Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLK HPSLSSL ARFPRRHSSSSVAHY LTTHWHSRSLR LVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL

A0A5D3CLL3 Anaphase-promoting complex subunit 131.2e-80100Show/hide
Query:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
        MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS
Subjt:  MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELS

Query:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
        LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL
Subjt:  LGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLAL

A0A6J1JH61 Anaphase-promoting complex subunit 138.5e-2695.24Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVR DDTEDSNQE+QPVD DTWHDLALGNQ
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

SwissProt top hitse value%identityAlignment
Q8L981 Anaphase-promoting complex subunit 131.5e-1971.43Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQE+Q  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ

Arabidopsis top hitse value%identityAlignment
AT1G73177.1 bonsai1.1e-2071.43Show/hide
Query:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ
        MAE+SLG+LIDI+DEEWMRDTLP DDL LPPVL V+ DDTE++NQE+Q  D +TW DLAL  Q
Subjt:  MAELSLGILIDILDEEWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTGCGTGTCCCTAAGGAAGAAGACACCGCCCCCGTCCTCAATTCCCAGCCCCAATTGAAGCTTCATCCGTCTTTGTCGTCCCTTAACGCAAGATTTCCACGCCG
CCATTCCTCTTCATCAGTCGCCCACTATTTGCTCACGACTCATTGGCATTCCAGATCGCTCAGACTACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATCCGGTGGCCG
CCCTTCGATCCTTGACTCCAACTTCGATATTGGGTTTTAGAACCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAG
GAATGGATGAGAGACACACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACTGAGGACTCAAATCAGGAGAGTCAGCCAGTTGATAC
TGATACTTGGCATGATCTTGCCCTAGGTAACCAATGA
mRNA sequenceShow/hide mRNA sequence
AATTTATCGATAGAAGCAAAGCATAGTAATAACCCAACGATACTTATATAGTTTGTAGAAGAAATTACGTACCTTTCCTTTCAGTTCCATTCCCACTCTACATTTTTGGT
CTCCTTCTGCTTTACTCACGCACTCGACAACTCTCCGCATTTCAAACAAGAACTTGGGCTTTGAAAGCCCAAAGTTGGCCTACTTTACAGATGGATGGTACTGCGTGTCC
CTAAGGAAGAAGACACCGCCCCCGTCCTCAATTCCCAGCCCCAATTGAAGCTTCATCCGTCTTTGTCGTCCCTTAACGCAAGATTTCCACGCCGCCATTCCTCTTCATCA
GTCGCCCACTATTTGCTCACGACTCATTGGCATTCCAGATCGCTCAGACTACTGGTTGGTGATTTGTCTCAGATCCGGCTGCATCCGGTGGCCGCCCTTCGATCCTTGAC
TCCAACTTCGATATTGGGTTTTAGAACCTACCTTAATAAGAAAACACCAATGGCAGAACTTAGTCTGGGTATATTGATAGACATTCTAGATGAGGAATGGATGAGAGACA
CACTCCCTCATGATGATCTTTTACTCCCTCCCGTGCTGGTTGTTCGGGCTGATGACACTGAGGACTCAAATCAGGAGAGTCAGCCAGTTGATACTGATACTTGGCATGAT
CTTGCCCTAGGTAACCAATGAACCACCTTCTCCTAACTAAGGATGGTCTGTTTTCAAGAAACTTGCTTCAAGTTATAAATTTTATTATCATATTCTCTTGCTGTATTTGC
ATTGTAGAGTGTCATATTTCTATAAAATCCATGTTGTAGATTTAGGTAGAAAGTGTTTGTTTGTGGTAAAAGAAACTATGCAAGTGTTTGTTTGTGGTAAAAGAAACTAT
GTACATGTTGGTGGCTGTCAGTTAAGACTATTGACGGATTTGCTGTTCTCTTTTGTAATTTGTTGTGTGAAGACATTGAAATTTTATTTCTTATTATGAGATCTTTGTCC
AATTCCATTTGTAAAAGACTTTAGAGTTGCTTCTAAACTTAATGGTTTTAAAGGAGTACTACCATCATTGTTTGGTACTTCAGTAAATAAAATTTTAATTATTCCTCTCC
A
Protein sequenceShow/hide protein sequence
MVLRVPKEEDTAPVLNSQPQLKLHPSLSSLNARFPRRHSSSSVAHYLLTTHWHSRSLRLLVGDLSQIRLHPVAALRSLTPTSILGFRTYLNKKTPMAELSLGILIDILDE
EWMRDTLPHDDLLLPPVLVVRADDTEDSNQESQPVDTDTWHDLALGNQ