; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006523 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006523
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr05:26466845..26482155
RNA-Seq ExpressionPay0006523
SyntenyPay0006523
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050751.1 pol protein [Cucumis melo var. makuwa]3.8e-14895.65Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.1e-14794.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0054731.1 pol protein [Cucumis melo var. makuwa]2.4e-14794.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0056504.1 pol protein [Cucumis melo var. makuwa]1.9e-14795.29Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPL+IDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

KAA0062245.1 pol protein [Cucumis melo var. makuwa]1.4e-14794.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCC+SPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGP+AYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

TrEMBL top hitse value%identityAlignment
A0A5A7U7V9 Reverse transcriptase5.3e-14894.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYG+CCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

A0A5A7UB07 Pol protein1.8e-14895.65Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

A0A5A7UMF1 Pol protein1.2e-14794.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP SWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNK+IPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

A0A5A7UMT8 Pol protein9.0e-14895.29Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDS+LHLMEFAYNNS         YQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPL+IDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

A0A5A7V8L8 Pol protein6.9e-14894.93Show/hide
Query:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE
        MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS         YQATIGMAPFEALYGKCC+SPVCWGEVGEQRLMGPE
Subjt:  MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPE

Query:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML
        LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVGPFEILERIGP+AYRLALPPSLSTVHDVFHVSML
Subjt:  LVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSML

Query:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE
        RKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYP+LFE
Subjt:  RKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.5e-2233.17Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P++     +P          SP+   E+        E  Q 
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS

Query:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR
        T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Subjt:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR

Query:  KY
        KY
Subjt:  KY

P0CT35 Transposon Tf2-2 polyprotein2.5e-2233.17Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P++     +P          SP+   E+        E  Q 
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS

Query:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR
        T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Subjt:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR

Query:  KY
        KY
Subjt:  KY

P0CT36 Transposon Tf2-3 polyprotein2.5e-2233.17Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P++     +P          SP+   E+        E  Q 
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS

Query:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR
        T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Subjt:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR

Query:  KY
        KY
Subjt:  KY

P0CT41 Transposon Tf2-12 polyprotein2.5e-2233.17Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P++     +P          SP+   E+        E  Q 
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS

Query:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR
        T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Subjt:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR

Query:  KY
        KY
Subjt:  KY

Q9UR07 Transposon Tf2-11 polyprotein2.5e-2233.17Show/hide
Query:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS
        + FS  + PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+  +   M P++     +P          SP+   E+        E  Q 
Subjt:  LDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQS

Query:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR
        T +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K    R    F  +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L 
Subjt:  TNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVVRF-ERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLR

Query:  KY
        KY
Subjt:  KY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATT
TCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCTTATCAGGCTACTATTGGCATGGCACCAT
TTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAG
AAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTATTCTTAAAGGTAGC
ACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGT
TGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAG
AACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAAGAAATTCCCCTAGTTAAAGTCTTATGGCGGAATCACCGGGTAGA
AGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGAGCTGTTCGAGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATT
TCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCTTATCAGGCTACTATTGGCATGGCACCAT
TTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAG
AAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTATTCTTAAAGGTAGC
ACCTATGAGAGGTGTCGTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGT
TGCCTCCATCACTCTCGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAG
AACTTGAGCTATGTTGAACAACCTGTTGAGGTGCTTGCTAGAGAGGTGAAGACGTTGAGGAATAAAGAAATTCCCCTAGTTAAAGTCTTATGGCGGAATCACCGGGTAGA
AGAGGCTACATGGGAGCGTGAAGATGACATGAGGTCCCGTTATCCCGAGCTGTTCGAGGGATAA
Protein sequenceShow/hide protein sequence
MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ
KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDE
NLSYVEQPVEVLAREVKTLRNKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFEG