; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006594 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006594
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPre-rRNA-processing protein ESF2
Genome locationchr11:2739362..2743380
RNA-Seq ExpressionPay0006594
SyntenyPay0006594
Gene Ontology termsGO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0034462 - small-subunit processome assembly (biological process)
GO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005839 - proteasome core complex (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034353 - ABT1/ESF2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039119 - ABT1/Esf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037601.1 pre-rRNA-processing protein ESF2 [Cucumis melo var. makuwa]9.5e-13065.52Show/hide
Query:  SREDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLLDVMEM-----------------------KDV-----------------RSV-----QLGES
        ++EDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLL+  ++                       KD+                 R V     +LGES
Subjt:  SREDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLLDVMEM-----------------------KDV-----------------RSV-----QLGES

Query:  NINSDS--ARKKKKKETRVQQ---------------------------------------------------------------------------EIKR
        NINSDS   +KKKK++   QQ                                                                           +IKR
Subjt:  NINSDS--ARKKKKKETRVQQ---------------------------------------------------------------------------EIKR

Query:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR
        KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEG    WVEFTDKRVAKKVANMLNGEPIGGR
Subjt:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR

Query:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT
        KRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT
Subjt:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT

Query:  KPVADVAVQNKQKLSTNVLARVEFGMIIKMVKSNF
        +PVADVAVQNKQ+LSTNVLARVEF MIIKMVKS+F
Subjt:  KPVADVAVQNKQKLSTNVLARVEFGMIIKMVKSNF

XP_016902333.1 PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]1.0e-11569.38Show/hide
Query:  ERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRVQQ---------------------------------------------
        +R +++ +     L   +DVMEMKDVRSVQLGESNINSDS   +KKKK++   QQ                                             
Subjt:  ERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRVQQ---------------------------------------------

Query:  ------------------------------EIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
                                      +IKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
Subjt:  ------------------------------EIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ

Query:  FFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIE
        FFSEG    WVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIE
Subjt:  FFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIE

Query:  ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT+PVADVAVQNKQ+LSTNVLARV
Subjt:  ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

XP_022990094.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima]3.1e-10489.52Show/hide
Query:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG
        Q+ IKRKK+LLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEG    WVEFTDKRVAKKVANMLNG
Subjt:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG

Query:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL
        EPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERDFYL+KVDKSRAL SIEERLKKKQKLREDSEMNS L DSQKLPKL
Subjt:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL

Query:  IRSFPQTKPVADVAVQNKQKLSTNVLARV
        IR+FPQT+PVAD AVQ+K KLSTN LA V
Subjt:  IRSFPQTKPVADVAVQNKQKLSTNVLARV

XP_031742023.1 pre-rRNA-processing protein ESF2 [Cucumis sativus]3.8e-11066.39Show/hide
Query:  EIRKAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRV----------------------------------------
        E RK  ++  +NK       L   +DVMEMKDV SVQLGESN+N+DS   +KKKKK+ R                                         
Subjt:  EIRKAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRV----------------------------------------

Query:  -------------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQR
                                             Q++IKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQR
Subjt:  -------------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQR

Query:  KRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD
        KRAGGFRGQFFSEG    WVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD
Subjt:  KRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD

Query:  KSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        KSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQT+PVAD AVQNK +LSTNVLA V
Subjt:  KSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

XP_038891142.1 pre-rRNA-processing protein ESF2 [Benincasa hispida]1.9e-10664.27Show/hide
Query:  KAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDSARKKKKKETRV---------------------------------------------
        K+  +R + + + +   L    D+MEMK+V SVQLGESNIN DS + KKKK+ +                                              
Subjt:  KAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDSARKKKKKETRV---------------------------------------------

Query:  --------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGG
                                        Q+ IKRKK+LLKE  NADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRIYLAPEDAASQVQRKR+GG
Subjt:  --------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGG

Query:  FRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRAL
        FRGQFFSEG    WVEFTDKRVAKKVAN+LNGE IGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRAL
Subjt:  FRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRAL

Query:  NSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        NSIEERLKKKQKLREDSEM S L DSQKLPKLIRSFPQT+PVAD  VQNKQ+LSTNVLA V
Subjt:  NSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

TrEMBL top hitse value%identityAlignment
A0A0A0KUC2 RRM domain-containing protein1.8e-11066.39Show/hide
Query:  EIRKAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRV----------------------------------------
        E RK  ++  +NK       L   +DVMEMKDV SVQLGESN+N+DS   +KKKKK+ R                                         
Subjt:  EIRKAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRV----------------------------------------

Query:  -------------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQR
                                             Q++IKRKKQLLKEAANADMRGICYLSRVPPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQR
Subjt:  -------------------------------------QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQR

Query:  KRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD
        KRAGGFRGQFFSEG    WVEFTDKRVAK+VANMLNGEPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD
Subjt:  KRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVD

Query:  KSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        KSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQT+PVAD AVQNK +LSTNVLA V
Subjt:  KSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

A0A1S4E282 pre-rRNA-processing protein ESF24.9e-11669.38Show/hide
Query:  ERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRVQQ---------------------------------------------
        +R +++ +     L   +DVMEMKDVRSVQLGESNINSDS   +KKKK++   QQ                                             
Subjt:  ERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDS--ARKKKKKETRVQQ---------------------------------------------

Query:  ------------------------------EIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
                                      +IKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ
Subjt:  ------------------------------EIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQ

Query:  FFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIE
        FFSEG    WVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIE
Subjt:  FFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIE

Query:  ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT+PVADVAVQNKQ+LSTNVLARV
Subjt:  ERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

A0A5A7T7P5 Pre-rRNA-processing protein ESF24.6e-13065.52Show/hide
Query:  SREDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLLDVMEM-----------------------KDV-----------------RSV-----QLGES
        ++EDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLL+  ++                       KD+                 R V     +LGES
Subjt:  SREDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLLDVMEM-----------------------KDV-----------------RSV-----QLGES

Query:  NINSDS--ARKKKKKETRVQQ---------------------------------------------------------------------------EIKR
        NINSDS   +KKKK++   QQ                                                                           +IKR
Subjt:  NINSDS--ARKKKKKETRVQQ---------------------------------------------------------------------------EIKR

Query:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR
        KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEG    WVEFTDKRVAKKVANMLNGEPIGGR
Subjt:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR

Query:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT
        KRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD YLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT
Subjt:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQT

Query:  KPVADVAVQNKQKLSTNVLARVEFGMIIKMVKSNF
        +PVADVAVQNKQ+LSTNVLARVEF MIIKMVKS+F
Subjt:  KPVADVAVQNKQKLSTNVLARVEFGMIIKMVKSNF

A0A6J1E2Q1 pre-rRNA-processing protein ESF21.3e-10389.08Show/hide
Query:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG
        Q+ IKRKK+LLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEG    WVEFTDKRVAKKVANMLNG
Subjt:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG

Query:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL
        E IGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERDFYL+KVDKSRAL SIEERLKKKQKLREDSEMNS L DSQKLPKL
Subjt:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL

Query:  IRSFPQTKPVADVAVQNKQKLSTNVLARV
        IR+FPQT+PVAD AVQ+K KLSTN LA V
Subjt:  IRSFPQTKPVADVAVQNKQKLSTNVLARV

A0A6J1JP68 pre-rRNA-processing protein ESF21.5e-10489.52Show/hide
Query:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG
        Q+ IKRKK+LLKE ANADMRGICYLSRVPPHMDPL+LRQILSQYGEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEG    WVEFTDKRVAKKVANMLNG
Subjt:  QQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNG

Query:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL
        EPIGGRKRSSFYYDLWNIK LSKFKWDDLTEETAYKHAIREQK+ALEISAAKRERDFYL+KVDKSRAL SIEERLKKKQKLREDSEMNS L DSQKLPKL
Subjt:  EPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKL

Query:  IRSFPQTKPVADVAVQNKQKLSTNVLARV
        IR+FPQT+PVAD AVQ+K KLSTN LA V
Subjt:  IRSFPQTKPVADVAVQNKQKLSTNVLARV

SwissProt top hitse value%identityAlignment
A3LVD5 Pre-rRNA-processing protein ESF22.5e-3235.25Show/hide
Query:  DVMEMKDVRSVQLGESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAG
        D ++   +R+  +GES    D     ++K  ++++   R  QL KE       G+CYLSR+PP+M P  LR ILS++G+I R++L PED+A   +R + G
Subjt:  DVMEMKDVRSVQLGESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAG

Query:  GFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRA
        G + + F+EG    WVEF +K+ AK  A+ LN   +GGRK S +Y D+ N+K LS FKW DLT++ A ++ +R+ KL+LE+S  ++    ++  V+KS+ 
Subjt:  GFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRA

Query:  LNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        +++I+   K+K++  E    + +  S K  K+  +            Q  +KLS +VL++V
Subjt:  LNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

O74362 Pre-rRNA-processing protein esf24.6e-3435.29Show/hide
Query:  ESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRL
        E+ ++ ++ +     +    +E++++++ +K +      G+ YLSR+PP+M P +LRQILSQYG+I R+YL PE +A + QR R GG +   + EG    
Subjt:  ESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRL

Query:  WVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKL
        W+EF  KRVAK VA +LN   IGG+K S ++ D+WN+K L KFKW  LTE+ A ++A RE +L +EI   +++   Y+  V+ ++ +  I ++  ++  L
Subjt:  WVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKL

Query:  REDSEM----NSLDDSQKLPKLIRSFPQTKPVA---DVAVQN-KQKLSTNVLARV
           +E       L +  K  K  R F   K +    ++   N KQ+   NVL RV
Subjt:  REDSEM----NSLDDSQKLPKLIRSFPQTKPVA---DVAVQN-KQKLSTNVLARV

Q2GZQ4 Pre-rRNA-processing protein ESF22.5e-3239.44Show/hide
Query:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR
        KK L+   A     G+ YLSR+PP M P +LR +L  YG+I RI+L PED     +R R GG + + F+EG    WVEF  K+ AKKV ++LN + IGG+
Subjt:  KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGR

Query:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSE
        K S ++ D+W +K L+ FKW  LTE+ + ++A R  ++  E++   RE   ++  V++++ +N I+ +   K+K  +DSE
Subjt:  KRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSE

Q4HZ47 Pre-rRNA-processing protein ESF23.9e-3336.12Show/hide
Query:  KDVRSVQLGESNINSDSARKKKKKETRVQQ--EIKR---KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAG
        KD +  Q  +   +     K+K K+T   +  ++ R   KK L+   A     G+ YLSR+PP M P +LR +L  YG I RI+LAPED AS  +R RAG
Subjt:  KDVRSVQLGESNINSDSARKKKKKETRVQQ--EIKR---KKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAG

Query:  GFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRA
        G + + ++EG    WVEFT K+ AK V ++LN   IGG+K S ++ DLWN+  L  FKW +LTE+ A ++A R  ++  EIS + +E   ++  V+K++ 
Subjt:  GFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRA

Query:  LNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLS--TNVLARV
        L+ +  + K K++  E       D+S +  K  RSF Q  P+A   +  + + +  T VL+++
Subjt:  LNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLS--TNVLARV

Q59YL9 Pre-rRNA-processing protein ESF24.3e-3238.65Show/hide
Query:  GESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSR
        G ++++ D   K  KK  ++       K+L KE       G+CYLSRVPP+M P +LR +LS++GEI R++L PED +   +R + GG + + F+EG   
Subjt:  GESNINSDSARKKKKKETRVQQEIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSR

Query:  LWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQK
         W+EF +K  AK  A  LNG  +GG+K S +Y D+ NIK L  FKW DLT++ A ++ +R+ KLA+EIS  ++    +++ V+KS+ + +I+    KK+K
Subjt:  LWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQK

Query:  LREDSEM
          +D  +
Subjt:  LREDSEM

Arabidopsis top hitse value%identityAlignment
AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-7257.98Show/hide
Query:  VQLGESNINSDS-ARKKKKKETRVQQEIKRKK-----QLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG
        +Q  ES+  +D  + +K+ KET   Q+  RKK     +LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RIYLAPED+ +QV RKRAGGFRG
Subjt:  VQLGESNINSDS-ARKKKKKETRVQQEIKRKK-----QLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG

Query:  QFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSI
        Q FSEG    WVEF  K VAK+VA+MLNGE IGG+K+SS YYD+WNIK L+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I
Subjt:  QFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSI

Query:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        + R++KK+K++E+S  N+       P+ I  F Q K + +   Q+K  LST+ LA V
Subjt:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV

AT3G56510.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-7257.98Show/hide
Query:  VQLGESNINSDS-ARKKKKKETRVQQEIKRKK-----QLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG
        +Q  ES+  +D  + +K+ KET   Q+  RKK     +LLKEA+ AD RG+CYLSR+PPHMD +RLR IL+QYGE+ RIYLAPED+ +QV RKRAGGFRG
Subjt:  VQLGESNINSDS-ARKKKKKETRVQQEIKRKK-----QLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG

Query:  QFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSI
        Q FSEG    WVEF  K VAK+VA+MLNGE IGG+K+SS YYD+WNIK L+KFKWDDLTEE AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I
Subjt:  QFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSI

Query:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV
        + R++KK+K++E+S  N+       P+ I  F Q K + +   Q+K  LST+ LA V
Subjt:  EERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGTGGAGTGGGAGGTCCTTGAGATGGCGAAGCCTTTTGGTCATGTATTGATTGTGTCATTTTCAAGAGAGGATGAGGAGTTGGTGGGCCCTTTTACTTTGGAGGA
AATTAGGAAAGCGGTCTCTGAGAGGGACAGGAACAAGGCCTCGGGCTCGCCAGTTTTTCTTGCAAGTCTTTTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGC
TGGGGGAAAGCAACATAAACTCTGATAGTGCAAGGAAAAAGAAGAAAAAGGAAACAAGAGTACAACAAGAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAAT
GCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTTATCTTGC
ACCTGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCCGAGGGTAACTCACGCCTATGGGTTGAATTTACTGATAAAAGAG
TTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTCTTTGAGTAAATTCAAGTGG
GATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGA
TAAATCACGTGCATTAAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGA
TCCGCAGCTTTCCACAAACAAAACCAGTTGCAGATGTTGCCGTACAAAACAAACAAAAACTATCTACAAATGTCCTGGCTAGGGTTGAGTTTGGTATGATTATTAAAATG
GTAAAAAGTAATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGTGGAGTGGGAGGTCCTTGAGATGGCGAAGCCTTTTGGTCATGTATTGATTGTGTCATTTTCAAGAGAGGATGAGGAGTTGGTGGGCCCTTTTACTTTGGAGGA
AATTAGGAAAGCGGTCTCTGAGAGGGACAGGAACAAGGCCTCGGGCTCGCCAGTTTTTCTTGCAAGTCTTTTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGC
TGGGGGAAAGCAACATAAACTCTGATAGTGCAAGGAAAAAGAAGAAAAAGGAAACAAGAGTACAACAAGAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAAT
GCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTTATCTTGC
ACCTGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCCGAGGGTAACTCACGCCTATGGGTTGAATTTACTGATAAAAGAG
TTGCCAAGAAGGTGGCTAATATGTTAAATGGTGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTCTTTGAGTAAATTCAAGTGG
GATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGA
TAAATCACGTGCATTAAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGA
TCCGCAGCTTTCCACAAACAAAACCAGTTGCAGATGTTGCCGTACAAAACAAACAAAAACTATCTACAAATGTCCTGGCTAGGGTTGAGTTTGGTATGATTATTAAAATG
GTAAAAAGTAATTTTTAG
Protein sequenceShow/hide protein sequence
MRVEWEVLEMAKPFGHVLIVSFSREDEELVGPFTLEEIRKAVSERDRNKASGSPVFLASLLDVMEMKDVRSVQLGESNINSDSARKKKKKETRVQQEIKRKKQLLKEAAN
ADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGNSRLWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKSLSKFKW
DDLTEETAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTKPVADVAVQNKQKLSTNVLARVEFGMIIKM
VKSNF