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Pay0006760 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006760
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome locationchr12:18014165..18014568
RNA-Seq ExpressionPay0006760
SyntenyPay0006760
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALI90159.1 NdhK, partial [Natsiatum herpeticum]7.0e-3472.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDA+TKL KK+SREIYEDRI SQ ENRCFTTNHKFH   S+N        L QR S  
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL

Query:  KLFSNT----KVQSLPTN
        K+ S T    KVQ LPTN
Subjt:  KLFSNT----KVQSLPTN

QSH55694.1 NADH-plastoquinone oxidoreductase subunit K [Chrysosplenium lanuginosum]3.7e-3573.73Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH----DYSINHH--LLQRSS---
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREI EDRI+SQ ENRCFTTNHKFH     ++IN++  LL +S    
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH----DYSINHH--LLQRSS---

Query:  --LLKLFSNTKVQSLPTN
          L + FSNTKVQ LPTN
Subjt:  --LLKLFSNTKVQSLPTN

QYL70941.1 NADH-plastoquinone oxidoreductase subunit K [Chrysosplenium nudicaule]2.6e-3674.58Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH----DYSINHH--LLQRSS---
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRI+SQ ENRCFTTNHKFH     ++IN++  LL +S    
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH----DYSINHH--LLQRSS---

Query:  --LLKLFSNTKVQSLPTN
          L + FSNTKVQ LPTN
Subjt:  --LLKLFSNTKVQSLPTN

XP_040945813.1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic-like [Gossypium hirsutum]1.8e-3775.42Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF-----------HDYSINHHLLQR
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRI+SQ+ +RCFTTNHKF            D SINHHLLQR
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF-----------HDYSINHHLLQR

Query:  SSLLKLFSNTKVQSLPTN
          LLK FS T+V  LPTN
Subjt:  SSLLKLFSNTKVQSLPTN

YP_009233003.1 NdhK [Ligusticum tenuissimum]1.1e-3471.43Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF------HDYSINHHLLQRSSL--
        MGACTI+GGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQ ENRCFTTNHKF      H  + +   L +     
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF------HDYSINHHLLQRSSL--

Query:  ----LKLFSNTKVQSLPTN
             K FSNTKVQSLPTN
Subjt:  ----LKLFSNTKVQSLPTN

TrEMBL top hitse value%identityAlignment
A0A0S0ZIA6 NdhK (Fragment)5.7e-3471.19Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDA+TKL KKISREIYEDRI+SQ ENRCFTTNHKFH  +SI+        L QR S  
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL

Query:  KLFSNT----KVQSLPTN
        ++   T    KVQ LPTN
Subjt:  KLFSNT----KVQSLPTN

A0A0S0ZIB8 NdhK (Fragment)7.5e-3471.19Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHDYSINH-------HLLQRSSLL
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRI+SQ +NRCFTTNHKFH     H        L QR S  
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHDYSINH-------HLLQRSSLL

Query:  KLFSNT----KVQSLPTN
        K    T    KVQ LPTN
Subjt:  KLFSNT----KVQSLPTN

A0A0S0ZIC2 NdhK (Fragment)3.4e-3472.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDA+TKL KK+SREIYEDRI SQ ENRCFTTNHKFH   S+N        L QR S  
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH-DYSIN------HHLLQRSSLL

Query:  KLFSNT----KVQSLPTN
        K+ S T    KVQ LPTN
Subjt:  KLFSNT----KVQSLPTN

A0A0S2IER2 NADH-quinone oxidoreductase subunit B7.5e-3489.29Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHDYSINH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFH  S  H
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHDYSINH

A0A0X8DBB1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic5.2e-3571.43Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF------HDYSINHHLLQRSSL--
        MGACTI+GGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQ ENRCFTTNHKF      H  + +   L +     
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF------HDYSINHHLLQRSSL--

Query:  ----LKLFSNTKVQSLPTN
             K FSNTKVQSLPTN
Subjt:  ----LKLFSNTKVQSLPTN

SwissProt top hitse value%identityAlignment
B0Z4L3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.0e-3591.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFH
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH

B0Z4U7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.0e-3591.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFH
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH

B0Z531 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.0e-3591.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFH
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH

Q4VZH1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic3.5e-3693.59Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKISREIYEDRIKSQEENRCFTTNHKFH
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH

Q9MTP4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic1.0e-3591.03Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ +IDAITKL KKISREIYEDRI+SQEENRCFTTNHKFH
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFH

Arabidopsis top hitse value%identityAlignment
AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial3.1e-0845.45Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISR
        MG+C   GG +   SYS VRG D+++PVD+Y  GCPP  + ++  + +L KKI+R
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISR

ATCG00430.1 photosystem II reaction center protein G1.3e-3385.71Show/hide
Query:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF
        MGACTITGGMFSTDSYSTVRGVDKLIPVDVY  GCPPKP+ VIDAITKL KKI+REIY+DRI+ Q+ NRCFTTNHKF
Subjt:  MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTTTCGGGTTGTCCACC
TAAACCCAAGGTTGTTATAGATGCTATAACAAAACTTTGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAAAATCGGTGTTTTACTACCA
ATCACAAATTTCATGATTACTCTATCAACCATCATCTACTTCAGAGATCATCCCTCCTAAAACTTTTTTCAAATACAAAAGTGCAGTCTCTTCCTACGAATTAG
mRNA sequenceShow/hide mRNA sequence
AAGGAATTAAAAAAATCGAGTAAACTATAATCTATATAAGAAGATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCG
ATAAGTTAATTCCTGTCGATGTGTATTTTTCGGGTTGTCCACCTAAACCCAAGGTTGTTATAGATGCTATAACAAAACTTTGTAAGAAAATATCTCGAGAAATCTATGAA
GATCGAATTAAGTCTCAAGAGGAAAATCGGTGTTTTACTACCAATCACAAATTTCATGATTACTCTATCAACCATCATCTACTTCAGAGATCATCCCTCCTAAAACTTTT
TTCAAATACAAAAGTGCAGTCTCTTCCTACGAATTAG
Protein sequenceShow/hide protein sequence
MGACTITGGMFSTDSYSTVRGVDKLIPVDVYFSGCPPKPKVVIDAITKLCKKISREIYEDRIKSQEENRCFTTNHKFHDYSINHHLLQRSSLLKLFSNTKVQSLPTN