; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0006868 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0006868
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationchr04:16248569..16253465
RNA-Seq ExpressionPay0006868
SyntenyPay0006868
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]2.1e-13797.65Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA A TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]1.1e-14199.61Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA APTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]2.7e-13294.51Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP  APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY  APTA+ EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]2.1e-12992.55Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPP     PPG GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAK TI+FKEVKRVD ILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY  AP ++ EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]1.2e-13596.47Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPG GNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE EEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA APTA+TEKGPEN  GESQQP ADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 61.0e-13797.65Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA A TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 65.2e-14299.61Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA APTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 65.2e-14299.61Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGYA APTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 61.3e-13294.51Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPPPP  APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY  APTA+ EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 62.3e-12992.55Show/hide
Query:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
        MATPP     PPG GNFEGGP  AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM
Subjt:  MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETI+FKEVKRVD ILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY  AP ++ EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 63.9e-8661.03Show/hide
Query:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY S      ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 64.0e-2234.16Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G+EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPP--------APPPP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++VKP     +E  +  + +RVD +L  L++K PP          P P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPP--------APPPP

Query:  PFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMK
               + P  +T K  E +  ++ Q +        P KRM+
Subjt:  PFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 64.9e-2839.79Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G+EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K  A      ++ KR+D ++ SL  K P    P   P+
Subjt:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPE

Q7Q107 Mediator of RNA polymerase II transcription subunit 66.8e-2234.04Show/hide
Query:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ
        I + D  W+    L+   V DYF+   +PFYD TCNNE +RM+      L  L+ MTG+EY+   V +P L+V RKQ R  P + TPM  YYI+ G++YQ
Subjt:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ

Query:  APQLCNVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY
        AP L +VF +R+   ++++  AF  ASS                 K     ++ ++++  P K E  +  + +RVD +L  L RK P P P     P G 
Subjt:  APQLCNVFAARVSRALYYISKAFTTASS--------------KLEKIGYVDSENESEEVKPAK-ETINFKEVKRVDHILASLQRKLP-PAPPPPPFPEGY

Query:  ASAPTADTEKGPENQQGESQQPSAD-PIIDQGPAK
          + TA+         G+S    AD  +I Q P +
Subjt:  ASAPTADTEKGPENQQGESQQPSAD-PIIDQGPAK

Q921D4 Mediator of RNA polymerase II transcription subunit 61.0e-2235.39Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M GIEY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPP-------APPPPP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E E+VKP     +E  +  + +RVD +L  L++K PP          P P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----AKETINFKEVKRVDHILASLQRKLPP-------APPPPP

Query:  FPEGYASA-PTADTEKGPENQQGESQQPSADPIIDQGPAKRMK
          +    A P  +T K  E +  ++ Q +        P KRM+
Subjt:  FPEGYASA-PTADTEKGPENQQGESQQPSADPIIDQGPAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related8.9e-9471.89Show/hide
Query:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KPA ET++ KE+KRVD IL SL RKL P
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP

Query:  APPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
         PPPPPFPEGY S      ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  APPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related2.8e-8761.03Show/hide
Query:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+   
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY---

Query:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF
            +++NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPPFPEGY S      ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ---VDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYASAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCACCACCACCGACGACGGCCCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGATGCCAGCAGCGCCTCAGCCTCCAGGCACGGACATGACTGGAATTTG
CTTTAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCA
GAATGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACATGCTGAATGAAGTTATGGAGCCTCATCTTTTCGTTTTCAGAAAGCAA
AAGAGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAATGTTTTTGCTGCCCGAGTTAGTCG
GGCACTGTATTACATATCAAAGGCCTTCACCACGGCTTCCTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAA
CCATTAACTTTAAGGAAGTTAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCCTGAAGGTTATGCTTCTGCT
CCCACAGCAGATACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCAGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
GATTAATGAGTTTGGAAATTGTAAATATGTAAACTATTTTTCAAATACTTACCTATCATTCGATCATAATAATCTATCAATCTATAGCATAAAAAAGTGTTGGGTGGTGT
TTGATTTTTAAAATTGCTATTGATTATAATAAATTAATAAATTTGGTACGAGATTAGGTTGCGATACAAATTCAACCCATACCGTGGAGGTTGAGATGTTTTTGCTACAT
GACTTCTCCCTCTTCGCTCTCGGTCGTGATCGTCGGGAAACAAAGAAAAAGGGTGTAGTGCTTTCACTGACGGCGGAGGGATCTGTAAAATTCAACACTTCGTGCCCAGA
AAAGTAAAATAGCCCACAAATGGCAACTCCACCACCACCGACGACGGCCCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGATGCCAGCAGCGCCTCAGCCTCCAGGCA
CGGACATGACTGGAATTTGCTTTAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACT
TGTAACAACGAACAACTCAGAATGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCATAGAGTACATGCTGAATGAAGTTATGGAGCCTCATCT
TTTCGTTTTCAGAAAGCAAAAGAGGGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAATGTTT
TTGCTGCCCGAGTTAGTCGGGCACTGTATTACATATCAAAGGCCTTCACCACGGCTTCCTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGAGTGAAGAA
GTAAAACCTGCAAAAGAAACCATTAACTTTAAGGAAGTTAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATTTCC
TGAAGGTTATGCTTCTGCTCCCACAGCAGATACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCAGCAGATCCCATTATTGATCAGGGTCCAGCTA
AAAGGATGAAATTTTGAAGAGTTTAGGCTACTTTGCCTGTTGAGAAGCCTATTTAATCCTGCAATTGAAATTCAATATGGATGACATCCCTGCACAAAGCATGGTGAGTT
GTGACCCCCCCCCCCCCCCAAAAAAAAAGAAGAAAAAAGGACAAAAAGTTGGAATCTGCCTTGTGAAAAGCCTGTAGTTTTAGACTTAACTTGAGCTAATCCATTGTTTT
AGCAGTAACTTGTACTACACTACCATGTAACCATCACTTCCTGATTTCGTTAGCTAGAATTGTTCGATACTTATATGACATACCACTAGTTGCTGTATCTTTGTATCGTG
ATAACTTGGGAAGAAGATTTTTAATATCGAACATGGTAATACAATTCCGCAATATCTTGGGCTAGAGACTTAAAACACTTACATGATTGGAATCATAAGCTTTTATTTGT
GTGTCATGTGTTCAGATCGTGTTAGGGAATGAATTATACATTCTTAGAATCATGCAATCTGAAGTCTGATACATAAAGTATTGCACGTAGAGACTGTTTGAAAGCAACAA
GCTCCTTGTGACTTTCGATACATACAAGGACTTCCGAAGTTTGCAAACATGATGGTCAAACTGGGCTTCAAATTCTAGTGGAGGACTCATATATACTTCCTCTTCTAAAT
TTCCATTTAGGAATGCGATCTTAACATCAAGTTGATATAGAGGTCAGTCTTTATTCATTGCAACAGATAGCAAGATTCTAATAATGTTTAAATTTGCAACAGGAGAGAAA
GCTTCAGAGTAGTTAACCCCATAAGTCTGGGTGAACCCTTTTGCAACTAATCTGGCCTTATGTCTGTTAAGAGTACCATCTGCTTTGTACTTGATAGTAAACACCCATTT
GCATCCACAATTTTGTCTCTTAGAGAGAATGCAGAGCTCCCAAGCCTTGTTCTTTTCTAGGGCTCTCATTTCTTCCATGACTGGAGTTTTTCTTGGGCATTCAAAGGCAA
CATGGATATTCTTGGGTATTGTAGTAGAGTCAAGACTGGTTGTAAAGGCTCTAAATTGAGGAGATAGGTTCTTATAAGAAACATAGTTAGCAATAGAGTGCTTTGTGCAG
GACCTGGTACCCTTCCTTAGTGCAATAGACAGATCAAGAGTCGGGTCGTACTTATTGATATTTTCTGAACGATCCTCCCTAGTTTCATTCTCAGTAACTTTTGCAATGAC
CTCATTCCCACCATCACTGCCCTTTCCATCTGAAATGACCTTAGTATCAACACTATGAATAGTTGTCTCCGACTTGTCACTTTCACTCATTTTACTGTCAATATGTGAGT
CAGTAAAATTAGTCATACCTTAGTCTCGTAAAGATTTAGGATCTTGGACTGAAGTCAGCTGAATAGTAGAAGACCCATCTTCCTTTTTAAGATTTCTCCTACATTAGGTT
TTCTAAGGAACTTGGTTCATAGTGAGGACCACGAGGACTTGGACTAGGTAGGATAACTAGAGTAGGACTGGTAGACTTTAAGGAAATCACCTAGTTAGACTCTTCACTCT
CACTCTTCGCCTGAGGTAGGCAAATGGGAAAGAAA
Protein sequenceShow/hide protein sequence
MATPPPPTTAPPGTGNFEGGPMPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQ
KRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYASA
PTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF