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Pay0007155 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007155
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr05:13217943..13218476
RNA-Seq ExpressionPay0007155
SyntenyPay0007155
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]1.7e-7180.79Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN SIVQLLAS+KLNGDNY  WKSNLNTILVVDDLRFVLT+E              +AYDRWVKAN+K RVYIL SM+DVLAKKH+S+ATAK IMDSLRE
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQPSWSLRH+AIK+IYTK+MKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSFV FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

KAA0048103.1 gag/pol protein [Cucumis melo var. makuwa]7.8e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+ IVQLLAS+KLN DNY TWKSNLNTILVVDDLRFVLT+E              +AYDRW+KANEK RVYIL SMSDVLAKKHESLATAKEIMDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQP WSLRHKAIKYIYTK+MKEGTS+REHVL MM+HFNIAEVNGG I+E NQVSFIL+SLPKSF+ FQTN SLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

KAA0064149.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+SIVQLLAS+KLNGDNY+TWKSNLNTILVVD+LRFVLT+E              +AYDRW+KANEKVRVYIL SMSDVLAKKHESLAT KE MDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQ  WSLRH+A KYIYTK+MKEGTSVREHVLDMMMHFNI +VNGG INE NQVSFIL+SLPKSF+ FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

TYJ96447.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-6878.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+ IVQLLAS+KLN DNY TWKSNLNTILVVDDLRFVLT+E              +AYDRW+KANEK RVYIL SMSDVLAKKHESLATAKEIMDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQP WSLRHKAIKYIYTKQMKEGTS+REHVL MM+HFNIAEVNGG I+E NQVSFIL+SLPKSF+ F+TN SLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

TYK16012.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+SIVQLLAS+KLNGDNY+TWKSNLNTILVVD+LRFVLT+E              +AYDRW+KANEKVRVYIL SMSDVLAKKHESLAT KE MDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQ  WSLRH+A KYIYTK+MKEGTSVREHVLDMMMHFNI +VNGG INE NQVSFIL+SLPKSF+ FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

TrEMBL top hitse value%identityAlignment
A0A5A7TWX1 Gag/pol protein3.8e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+ IVQLLAS+KLN DNY TWKSNLNTILVVDDLRFVLT+E              +AYDRW+KANEK RVYIL SMSDVLAKKHESLATAKEIMDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQP WSLRHKAIKYIYTK+MKEGTS+REHVL MM+HFNIAEVNGG I+E NQVSFIL+SLPKSF+ FQTN SLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

A0A5A7VF40 Gag/pol protein1.7e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+SIVQLLAS+KLNGDNY+TWKSNLNTILVVD+LRFVLT+E              +AYDRW+KANEKVRVYIL SMSDVLAKKHESLAT KE MDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQ  WSLRH+A KYIYTK+MKEGTSVREHVLDMMMHFNI +VNGG INE NQVSFIL+SLPKSF+ FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

A0A5D3BBF3 Gag/pol protein6.4e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+ IVQLLAS+KLN DNY TWKSNLNTILVVDDLRFVLT+E              +AYDRW+KANEK RVYIL SMSDVLAKKHESLATAKEIMDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQP WSLRHKAIKYIYTKQMKEGTS+REHVL MM+HFNIAEVNGG I+E NQVSFIL+SLPKSF+ F+TN SLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

A0A5D3CWV9 Gag/pol protein1.7e-6978.53Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN+SIVQLLAS+KLNGDNY+TWKSNLNTILVVD+LRFVLT+E              +AYDRW+KANEKVRVYIL SMSDVLAKKHESLAT KE MDSL+ 
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQ  WSLRH+A KYIYTK+MKEGTSVREHVLDMMMHFNI +VNGG INE NQVSFIL+SLPKSF+ FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

E2GK51 Gag/pol protein (Fragment)8.1e-7280.79Show/hide
Query:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE
        MN SIVQLLAS+KLNGDNY  WKSNLNTILVVDDLRFVLT+E              +AYDRWVKAN+K RVYIL SM+DVLAKKH+S+ATAK IMDSLRE
Subjt:  MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKE--------------QAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLRE

Query:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK
        MFGQPSWSLRH+AIK+IYTK+MKEGTSVREHVLDMMMHFNIAEVNGGPI+E NQVSFIL+SLPKSFV FQTNASLNK
Subjt:  MFGQPSWSLRHKAIKYIYTKQMKEGTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTCAATAGTACAACTCTTAGCTTCTCAGAAACTTAATGGCGATAATTATATGACTTGGAAATCAAACTTAAATACAATACTAGTCGTAGATGATTTAAGGTT
TGTCTTAACTAAGGAACAAGCATATGATCGATGGGTTAAGGCCAATGAAAAGGTCCGTGTCTATATTCTTGTCAGCATGTCTGATGTTTTGGCAAAGAAACATGAATCCT
TAGCTACAGCTAAAGAGATTATGGATTCATTAAGGGAGATGTTTGGTCAGCCTTCATGGTCTCTCAGACATAAAGCAATTAAGTACATTTACACCAAGCAAATGAAGGAA
GGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTTAATATTGCTGAAGTAAATGGCGGTCCCATCAATGAGGAAAATCAGGTGAGCTTTATTTTAAAATC
TCTTCCAAAGAGTTTTGTATCGTTTCAAACGAATGCGTCTCTCAATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTCAATAGTACAACTCTTAGCTTCTCAGAAACTTAATGGCGATAATTATATGACTTGGAAATCAAACTTAAATACAATACTAGTCGTAGATGATTTAAGGTT
TGTCTTAACTAAGGAACAAGCATATGATCGATGGGTTAAGGCCAATGAAAAGGTCCGTGTCTATATTCTTGTCAGCATGTCTGATGTTTTGGCAAAGAAACATGAATCCT
TAGCTACAGCTAAAGAGATTATGGATTCATTAAGGGAGATGTTTGGTCAGCCTTCATGGTCTCTCAGACATAAAGCAATTAAGTACATTTACACCAAGCAAATGAAGGAA
GGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTTAATATTGCTGAAGTAAATGGCGGTCCCATCAATGAGGAAAATCAGGTGAGCTTTATTTTAAAATC
TCTTCCAAAGAGTTTTGTATCGTTTCAAACGAATGCGTCTCTCAATAAATAG
Protein sequenceShow/hide protein sequence
MNNSIVQLLASQKLNGDNYMTWKSNLNTILVVDDLRFVLTKEQAYDRWVKANEKVRVYILVSMSDVLAKKHESLATAKEIMDSLREMFGQPSWSLRHKAIKYIYTKQMKE
GTSVREHVLDMMMHFNIAEVNGGPINEENQVSFILKSLPKSFVSFQTNASLNK