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Pay0007324 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007324
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:7262216..7265018
RNA-Seq ExpressionPay0007324
SyntenyPay0007324
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006508 - proteolysis (biological process)
GO:0009451 - RNA modification (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0000774 - adenyl-nucleotide exchange factor activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004185 - serine-type carboxypeptidase activity (molecular function)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34182.1 pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo]2.7e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

KAA0041567.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.7e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

TYK19689.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.7e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

XP_008466537.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucumis melo]2.7e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

XP_011659131.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucumis sativus]1.8e-3995.51Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEK
        +NKFASNLFVANALVDMYAKSGALKEARKQFE MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEK

TrEMBL top hitse value%identityAlignment
A0A0A0K9P1 Uncharacterized protein8.5e-4095.51Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEK
        +NKFASNLFVANALVDMYAKSGALKEARKQFE MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEK

A0A1S3CST1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial1.3e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

A0A5A7TIQ6 Pentatricopeptide repeat-containing protein1.3e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

A0A5D3D800 Pentatricopeptide repeat-containing protein1.3e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

E5GCI3 Pentatricopeptide repeat-containing protein1.3e-4095.56Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF
        +NKF SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV++F
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVEKF

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.8e-1542.86Show/hide
Query:  FASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        F  +LF   ALVDMYAK+G L +ARK F+ ++  D   W ++I GYVQ   N+EA  ++RRM + G++P++ ++AS++ AC+++
Subjt:  FASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

Q9LFI1 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial2.0e-1442.17Show/hide
Query:  ASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        A   F+ N L+DMYAK G+L +AR+ F+ M   D VSW+ +IVGY Q  + +EA  +F+ M S G+ P+ V+   +++AC++V
Subjt:  ASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

Q9LNP2 Putative pentatricopeptide repeat-containing protein At1g176303.5e-1443.02Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN
        R   + N+ V NALV+MYAK G L E    FE ++  D +SWN+II GY    + ++A  MF RM+S+G  PD ++L +++SAC++
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN

Q9LW63 Putative pentatricopeptide repeat-containing protein At3g233306.3e-1644.83Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        R  F SN+F+A+ALVDMY+K G +K ARK F+ M + D VSW AII+G+    +  EA  +F  M   GV P++V+  ++++AC++V
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

Q9SS83 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial1.0e-1855.17Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        + K A NLFV NALVDMYAK GAL++AR+ FE M   DNV+WN II  YVQ+E   EAF +F+RM   G++ D   LAS + AC +V
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

Arabidopsis top hitse value%identityAlignment
AT1G17630.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.5e-1543.02Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN
        R   + N+ V NALV+MYAK G L E    FE ++  D +SWN+II GY    + ++A  MF RM+S+G  PD ++L +++SAC++
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-1642.86Show/hide
Query:  FASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        F  +LF   ALVDMYAK+G L +ARK F+ ++  D   W ++I GYVQ   N+EA  ++RRM + G++P++ ++AS++ AC+++
Subjt:  FASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein7.4e-2055.17Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        + K A NLFV NALVDMYAK GAL++AR+ FE M   DNV+WN II  YVQ+E   EAF +F+RM   G++ D   LAS + AC +V
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.5e-1744.83Show/hide
Query:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        R  F SN+F+A+ALVDMY+K G +K ARK F+ M + D VSW AII+G+    +  EA  +F  M   GV P++V+  ++++AC++V
Subjt:  RNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV

AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-1542.17Show/hide
Query:  ASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV
        A   F+ N L+DMYAK G+L +AR+ F+ M   D VSW+ +IVGY Q  + +EA  +F+ M S G+ P+ V+   +++AC++V
Subjt:  ASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTAGCCATCTAATTAATATAACAAATGGCCAAGAGCGTTTAAGGAGATTGATTGCACCAGTGCTTACAAAGGGCTATACCAAAGTATTCAAAGAGGATAGCAA
GAGGTCAAGGAACAAGTTTGCATCTAATCTATTTGTTGCAAATGCGTTGGTAGACATGTATGCTAAATCAGGGGCTTTAAAGGAAGCAAGAAAACAATTTGAGTTCATGA
AAATTCATGACAATGTTTCATGGAATGCAATAATTGTGGGGTATGTGCAGGAAGAGTATAATGATGAGGCTTTCTTCATGTTTCGAAGAATGGTTTCCAATGGGGTTCTT
CCGGATGAGGTGTCTTTGGCCAGTATAGTGAGTGCTTGTGCAAATGTTGAGAAGTTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTAGCCATCTAATTAATATAACAAATGGCCAAGAGCGTTTAAGGAGATTGATTGCACCAGTGCTTACAAAGGGCTATACCAAAGTATTCAAAGAGGATAGCAA
GAGGTCAAGGAACAAGTTTGCATCTAATCTATTTGTTGCAAATGCGTTGGTAGACATGTATGCTAAATCAGGGGCTTTAAAGGAAGCAAGAAAACAATTTGAGTTCATGA
AAATTCATGACAATGTTTCATGGAATGCAATAATTGTGGGGTATGTGCAGGAAGAGTATAATGATGAGGCTTTCTTCATGTTTCGAAGAATGGTTTCCAATGGGGTTCTT
CCGGATGAGGTGTCTTTGGCCAGTATAGTGAGTGCTTGTGCAAATGTTGAGAAGTTTAACTGA
Protein sequenceShow/hide protein sequence
MSSSHLINITNGQERLRRLIAPVLTKGYTKVFKEDSKRSRNKFASNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVL
PDEVSLASIVSACANVEKFN