| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046865.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 7.3e-162 | 81.44 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
MGSNGN MGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRI A +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA IISQMQTYGETIKDQTIVEKVLISLTPKFDHVV AIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQ D
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
K+ + GKG NK + +K G V GCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Query: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
GNRILTNVQYVPDIGYN LSVGQLMESG SILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKE GIH E
Subjt: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
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| KAA0055915.1 copia protein [Cucumis melo var. makuwa] | 2.0e-183 | 68.68 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQ
M +NGN MGTTQPLIPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDD+GKL+EN++KD KALVI+QQAVHD+VFSRIA AFQ
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQ
Query: GDSRVLVVKLKSLRRDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINR
GDSRVLVVKL+SL+RDFETLMMKNGESIADFLSRA TIISQMQTYGETI DQTIVEKVL SLTPKFDHVVAAIEESK+LSTFTFIELMGSL+AHESRIN
Subjt: GDSRVLVVKLKSLRRDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINR
Query: SMERNEEKAFQVKDVVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------
SME+N+EKAF+VKDVVPK NDSDCVMT+G+G GGYR RGRGTGKG NKANIQCYHCKKFGHVKAD
Subjt: SMERNEEKAFQVKDVVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------
Query: ------------------------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQ-----------YVPDIGYNF
G NHMTGLKPVFKELNEGEKLKVEL N KELQVEGK +GIETH+GNRILTNVQ V ++
Subjt: ------------------------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQ-----------YVPDIGYNF
Query: LSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQM
L+ + + S+SETFEKFKHFKAKVEKQSGMFIKSLRSDRGG+FLSNNFNHFC+E GIHRELTTPYT EQNGVAERKNRTVVEMARSMLQM
Subjt: LSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQM
Query: KGLLNDFWAEAVSASI------PTEHLTNK
KGL NDFW EAVS SI PT+ + NK
Subjt: KGLLNDFWAEAVSASI------PTEHLTNK
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| TYK03281.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 3.4e-159 | 79 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
MGSNGN MGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRI A +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA IISQMQTYGETIKDQTIVEKVLISLTPKFDHVV AIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQ D
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
K+ + GKG NK + +K G V GCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Query: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
GNRILTNVQYVPDIGYN LSVGQLMESG SILFDD ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKE GIH E
Subjt: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
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| TYK27735.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.3e-179 | 59.87 | Show/hide |
Query: MKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQGDSRVLVVKLKSLRRDFETLMMKNGESIA
+KTLLRSQDLWDLVEQGYVDPDD+GKLREN+KKDSKALVIIQQAVHDSVFSRIA AFQGDSRVL+VKL+SLRRDFETLMMKNGESIA
Subjt: MKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQGDSRVLVVKLKSLRRDFETLMMKNGESIA
Query: DFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDVVPKSNDSDCVMTRG
DFLSRA TIISQMQTYGETIKDQTIVEKVL SLTPKFDHVVAAIEESKNL TFTFIELMGSLEAHESRINRSMERNEEKAFQVKD VPK NDSD VMTRG
Subjt: DFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDVVPKSNDSDCVMTRG
Query: RGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------------------------------CGCSN
RGRGGYRGRG GT KG NKANIQCYHCKKFGHVKAD CSN
Subjt: RGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------------------------------CGCSN
Query: HMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD-----------------------
HMTGLKPVFKELNEGEKLKV+L NGKELQVEGKGTV IETHHGNRILTNVQYVPDIGYN LSVGQLMESG+SILFDD
Subjt: HMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVE
ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRG EFLSNNFNHFCKE GIHRELTTPYTPEQNGVAERKN+TVVE
Subjt: -------------------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVE
Query: MARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
MARSMLQMKGLLNDFWAEAVS SI PT+ + NK
Subjt: MARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
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| TYK28117.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.2e-183 | 63.16 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
M +NGN MGT QPLIPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDD+GKL+EN++KDSKALVIIQQAVHD+VFSRIAA +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA TIISQMQTYGETI DQTIVEKVL SLTPKFDHVV AIEESK+LSTFTFIELMGSL+AHESRIN SME+NEEKAF+VKD
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY----------------------------------
VVPK NDSDCVMT+G+G GGYR RGRGTGKG NKANIQCYHCKKFGHVKAD
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY----------------------------------
Query: ----------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD--------
G NHMT LKPVFKELNEGEKLKVEL NGKELQVEGK T+GIETH+GNRILTNVQYVPDIGYN LSVGQLMESG SILFDD
Subjt: ----------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD--------
Query: ----------------------------------------------------------------------------ESKSETFEKFKHFKAKVEKQSGMF
+S+SETFEKFKHFKAKVEKQSGMF
Subjt: ----------------------------------------------------------------------------ESKSETFEKFKHFKAKVEKQSGMF
Query: IKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
IKS RSDRGG+FLSNNFNHFC+E GIHRELTTPYT EQNGVAERKNRTVVEMARSMLQMKGL NDFW EA S SI PT+ + NK
Subjt: IKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZP7 Putative gag-pol polyprotein, identical | 3.6e-162 | 81.44 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
MGSNGN MGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRI A +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA IISQMQTYGETIKDQTIVEKVLISLTPKFDHVV AIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQ D
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
K+ + GKG NK + +K G V GCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Query: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
GNRILTNVQYVPDIGYN LSVGQLMESG SILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKE GIH E
Subjt: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
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| A0A5A7UQM0 Copia protein | 9.6e-184 | 68.68 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQ
M +NGN MGTTQPLIPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDD+GKL+EN++KD KALVI+QQAVHD+VFSRIA AFQ
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQ
Query: GDSRVLVVKLKSLRRDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINR
GDSRVLVVKL+SL+RDFETLMMKNGESIADFLSRA TIISQMQTYGETI DQTIVEKVL SLTPKFDHVVAAIEESK+LSTFTFIELMGSL+AHESRIN
Subjt: GDSRVLVVKLKSLRRDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINR
Query: SMERNEEKAFQVKDVVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------
SME+N+EKAF+VKDVVPK NDSDCVMT+G+G GGYR RGRGTGKG NKANIQCYHCKKFGHVKAD
Subjt: SMERNEEKAFQVKDVVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------
Query: ------------------------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQ-----------YVPDIGYNF
G NHMTGLKPVFKELNEGEKLKVEL N KELQVEGK +GIETH+GNRILTNVQ V ++
Subjt: ------------------------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQ-----------YVPDIGYNF
Query: LSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQM
L+ + + S+SETFEKFKHFKAKVEKQSGMFIKSLRSDRGG+FLSNNFNHFC+E GIHRELTTPYT EQNGVAERKNRTVVEMARSMLQM
Subjt: LSVGQLMESGFSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQM
Query: KGLLNDFWAEAVSASI------PTEHLTNK
KGL NDFW EAVS SI PT+ + NK
Subjt: KGLLNDFWAEAVSASI------PTEHLTNK
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| A0A5D3BU79 Putative gag-pol polyprotein, identical | 1.7e-159 | 79 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
MGSNGN MGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRI A +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA IISQMQTYGETIKDQTIVEKVLISLTPKFDHVV AIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQ D
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
K+ + GKG NK + +K G V GCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGINKANI-QCYHCKKFGHVKADYCGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHH
Query: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
GNRILTNVQYVPDIGYN LSVGQLMESG SILFDD ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKE GIH E
Subjt: GNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRE
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| A0A5D3DWC7 Putative gag-pol polyprotein, identical | 5.6e-184 | 63.16 | Show/hide |
Query: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
M +NGN MGT QPLIPIFKGEGYEFWSI MKTLL SQDLWDLVEQGY DPDD+GKL+EN++KDSKALVIIQQAVHD+VFSRIAA +
Subjt: MGSNGNAMGTTQPLIPIFKGEGYEFWSIPMKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIAAFQGDSRVLVVKLKSLR
Query: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
RDFETLMMKNGESIADFLSRA TIISQMQTYGETI DQTIVEKVL SLTPKFDHVV AIEESK+LSTFTFIELMGSL+AHESRIN SME+NEEKAF+VKD
Subjt: RDFETLMMKNGESIADFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKD
Query: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY----------------------------------
VVPK NDSDCVMT+G+G GGYR RGRGTGKG NKANIQCYHCKKFGHVKAD
Subjt: VVPKSNDSDCVMTRGRGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY----------------------------------
Query: ----------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD--------
G NHMT LKPVFKELNEGEKLKVEL NGKELQVEGK T+GIETH+GNRILTNVQYVPDIGYN LSVGQLMESG SILFDD
Subjt: ----------CGCSNHMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD--------
Query: ----------------------------------------------------------------------------ESKSETFEKFKHFKAKVEKQSGMF
+S+SETFEKFKHFKAKVEKQSGMF
Subjt: ----------------------------------------------------------------------------ESKSETFEKFKHFKAKVEKQSGMF
Query: IKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
IKS RSDRGG+FLSNNFNHFC+E GIHRELTTPYT EQNGVAERKNRTVVEMARSMLQMKGL NDFW EA S SI PT+ + NK
Subjt: IKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
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| A0A5D3DWP2 Putative gag-pol polyprotein, identical | 6.4e-180 | 59.87 | Show/hide |
Query: MKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQGDSRVLVVKLKSLRRDFETLMMKNGESIA
+KTLLRSQDLWDLVEQGYVDPDD+GKLREN+KKDSKALVIIQQAVHDSVFSRIA AFQGDSRVL+VKL+SLRRDFETLMMKNGESIA
Subjt: MKTLLRSQDLWDLVEQGYVDPDDKGKLRENKKKDSKALVIIQQAVHDSVFSRIA--------------AFQGDSRVLVVKLKSLRRDFETLMMKNGESIA
Query: DFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDVVPKSNDSDCVMTRG
DFLSRA TIISQMQTYGETIKDQTIVEKVL SLTPKFDHVVAAIEESKNL TFTFIELMGSLEAHESRINRSMERNEEKAFQVKD VPK NDSD VMTRG
Subjt: DFLSRAMTIISQMQTYGETIKDQTIVEKVLISLTPKFDHVVAAIEESKNLSTFTFIELMGSLEAHESRINRSMERNEEKAFQVKDVVPKSNDSDCVMTRG
Query: RGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------------------------------CGCSN
RGRGGYRGRG GT KG NKANIQCYHCKKFGHVKAD CSN
Subjt: RGRGGYRGRGRGTGKGI--------------NKANIQCYHCKKFGHVKADY--------------------------------------------CGCSN
Query: HMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD-----------------------
HMTGLKPVFKELNEGEKLKV+L NGKELQVEGKGTV IETHHGNRILTNVQYVPDIGYN LSVGQLMESG+SILFDD
Subjt: HMTGLKPVFKELNEGEKLKVELENGKELQVEGKGTVGIETHHGNRILTNVQYVPDIGYNFLSVGQLMESGFSILFDD-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVE
ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRG EFLSNNFNHFCKE GIHRELTTPYTPEQNGVAERKN+TVVE
Subjt: -------------------------ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVE
Query: MARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
MARSMLQMKGLLNDFWAEAVS SI PT+ + NK
Subjt: MARSMLQMKGLLNDFWAEAVSASI------PTEHLTNK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.5e-13 | 44.09 | Show/hide |
Query: KSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAV
KS+ F F+ F AK E + + L D G E+LSN FC + GI LT P+TP+ NGV+ER RT+ E AR+M+ L FW EAV
Subjt: KSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.5e-20 | 48.98 | Show/hide |
Query: ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSAS
++K + F+ F+ F A VE+++G +K LRSD GGE+ S F +C GI E T P TP+ NGVAER NRT+VE RSML+M L FW EAV +
Subjt: ESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSAS
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| Q07163 Transposon TyH3 Gag-Pol polyprotein | 1.2e-05 | 30.3 | Show/hide |
Query: DESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSAS
D + + F A ++ Q + ++ DRG E+ + + F +++GI TT +GVAER NRT+++ R+ LQ GL N W A+ S
Subjt: DESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAEAVSAS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.4e-06 | 30.19 | Show/hide |
Query: FSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAE
++ L+ + KS+ E F FK +E + I + SD GGEF++ + + GI + P+TPE NG++ERK+R +VE ++L + +W
Subjt: FSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAE
Query: AVSASI
A + ++
Subjt: AVSASI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-08 | 33.02 | Show/hide |
Query: FSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAE
++ L+ + KS+ + F FK+ VE + I +L SD GGEF+ + + GI + P+TPE NG++ERK+R +VEM ++L + +W
Subjt: FSILFDDESKSETFEKFKHFKAKVEKQSGMFIKSLRSDRGGEFLSNNFNHFCKEDGIHRELTTPYTPEQNGVAERKNRTVVEMARSMLQMKGLLNDFWAE
Query: AVSASI
A S ++
Subjt: AVSASI
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