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Pay0007678 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007678
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionHydroxymethylbilane synthase
Genome locationchr12:7325050..7330656
RNA-Seq ExpressionPay0007678
SyntenyPay0007678
Gene Ontology termsGO:0006782 - protoporphyrinogen IX biosynthetic process (biological process)
GO:0017157 - regulation of exocytosis (biological process)
GO:0018160 - peptidyl-pyrromethane cofactor linkage (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0004418 - hydroxymethylbilane synthase activity (molecular function)
GO:0005096 - GTPase activator activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0019905 - syntaxin binding (molecular function)
GO:0045159 - myosin II binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051748.1 porphobilinogen deaminase [Cucumis melo var. makuwa]6.1e-1772.37Show/hide
Query:  MPRPCNVGSLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA--------RQNWHQRKAMEEAQKN
        MPRPCNVGSLL F SLSLKPPAFSNGAKKFHGVGLIRASV VEQQVEKTKVA        R  W     ME+ +KN
Subjt:  MPRPCNVGSLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA--------RQNWHQRKAMEEAQKN

KGN58748.2 hypothetical protein Csa_002701 [Cucumis sativus]3.2e-1387.04Show/hide
Query:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        MPRPCNVGSL  L F SLSLKPP FSNGAKKFHGVGLIRA VA EQQVEKTKVA
Subjt:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

XP_004149732.1 porphobilinogen deaminase, chloroplastic [Cucumis sativus]3.2e-1387.04Show/hide
Query:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        MPRPCNVGSL  L F SLSLKPP FSNGAKKFHGVGLIRA VA EQQVEKTKVA
Subjt:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

XP_023523547.1 porphobilinogen deaminase, chloroplastic-like [Cucurbita pepo subsp. pepo]4.1e-1383.33Show/hide
Query:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        M RPCN+GSL R  F SLSLKPPAFS GAKKFHG GLIRASVAVEQQ EKTKVA
Subjt:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

XP_038906286.1 porphobilinogen deaminase, chloroplastic [Benincasa hispida]1.4e-1387.04Show/hide
Query:  MPRPCNVG--SLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        MPRP NVG  SLL F SLSLKPPAFSNGAKKFHG GLIRASVAVEQQ EKTKVA
Subjt:  MPRPCNVG--SLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

TrEMBL top hitse value%identityAlignment
A0A5A7U4C9 Hydroxymethylbilane synthase7.1e-1197.5Show/hide
Query:  FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        F SLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
Subjt:  FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

A0A5A7U8Y5 Porphobilinogen deaminase3.0e-1772.37Show/hide
Query:  MPRPCNVGSLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA--------RQNWHQRKAMEEAQKN
        MPRPCNVGSLL F SLSLKPPAFSNGAKKFHGVGLIRASV VEQQVEKTKVA        R  W     ME+ +KN
Subjt:  MPRPCNVGSLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA--------RQNWHQRKAMEEAQKN

A0A6J1DII9 Hydroxymethylbilane synthase2.9e-1279.63Show/hide
Query:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        M RPCNVGSL  L F SLSLKPPAF NG KKF G+GL+RASVAVEQQ EKTKVA
Subjt:  MPRPCNVGSL--LRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

A0A6J1GCC7 Hydroxymethylbilane synthase5.8e-1381.48Show/hide
Query:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        M RPCN+GSL R  F SLSLKPPAFS G KKFHG GLIRASVAVEQQ EKTKVA
Subjt:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

A0A6J1KA97 Hydroxymethylbilane synthase5.8e-1381.48Show/hide
Query:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA
        M RPCN+GSL R  F SLSLKPPAFS G K+FHGVGLIRASVAVEQQ EKTKVA
Subjt:  MPRPCNVGSLLR--FFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCCCTTGTAATGTTGGTTCTCTTCTTAGGTTCTTTTCACTTTCCCTTAAACCTCCGGCTTTCTCTAATGGCGCCAAGAAGTTTCATGGGGTTGGTCTCATAAG
AGCTTCTGTTGCTGTGGAGCAGCAGGTAGAGAAGACCAAGGTTGCTCGTCAGAATTGGCACCAGAGGAAGGCCATGGAAGAAGCTCAGAAAAATAAATTGAATGAAGATG
GGAAGCCTTATGTTATTGCTCGTCATTATCCAGAAGACGGTGGTTCAAAGAACCATCACTTTATCCCAAGAGAAGCTTTCAACAACTATGGTGGGAGTGGTAATGGTGGT
GGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCCCTTGTAATGTTGGTTCTCTTCTTAGGTTCTTTTCACTTTCCCTTAAACCTCCGGCTTTCTCTAATGGCGCCAAGAAGTTTCATGGGGTTGGTCTCATAAG
AGCTTCTGTTGCTGTGGAGCAGCAGGTAGAGAAGACCAAGGTTGCTCGTCAGAATTGGCACCAGAGGAAGGCCATGGAAGAAGCTCAGAAAAATAAATTGAATGAAGATG
GGAAGCCTTATGTTATTGCTCGTCATTATCCAGAAGACGGTGGTTCAAAGAACCATCACTTTATCCCAAGAGAAGCTTTCAACAACTATGGTGGGAGTGGTAATGGTGGT
GGCTAA
Protein sequenceShow/hide protein sequence
MPRPCNVGSLLRFFSLSLKPPAFSNGAKKFHGVGLIRASVAVEQQVEKTKVARQNWHQRKAMEEAQKNKLNEDGKPYVIARHYPEDGGSKNHHFIPREAFNNYGGSGNGG
G