; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0007704 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007704
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr11:16991558..16992019
RNA-Seq ExpressionPay0007704
SyntenyPay0007704
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-4973.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-4973.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-4973.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-4973.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-4973.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein9.2e-5073.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
A0A5A7TU93 Gag/pol protein9.2e-5073.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
A0A5A7TWB9 Gag/pol protein9.2e-5073.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
A0A5D3CPJ6 Gag/pol protein9.2e-5073.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
A0A5D3CSZ6 Gag/pol protein9.2e-5073.2Show/hide
Query:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE
        MTSATLNMLA DKLNGNNY SWKNTINTVLIIDDLRFVLVE C +VPA NAT+TV+E                      +LAKKH+SML AR+IMDSLQE
Subjt:  MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQE---------------------ALLAKKHKSMLIARKIMDSLQE

Query:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
        MFG++ Y+IKHDALKYIYNARMNE ASVREHVLNMMVH NVA+MNGAVIDEAS
Subjt:  MFGKSFYRIKHDALKYIYNARMNERASVREHVLNMMVHCNVAKMNGAVIDEAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTGCTACTTTGAATATGCTGGCTACTGATAAACTTAATGGCAATAATTATACATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATT
TGTCCTAGTTGAGAACTGTTATCGAGTCCCAGCTGTTAATGCAACTCAAACTGTTCAAGAAGCATTATTGGCCAAGAAACATAAATCAATGCTCATTGCTCGTAAGATTA
TGGATTCCTTGCAAGAGATGTTTGGTAAATCCTTTTATCGAATCAAGCATGATGCTCTAAAATACATTTATAATGCCCGCATGAACGAGAGAGCCTCAGTACGAGAACAT
GTTCTCAATATGATGGTTCATTGCAATGTGGCAAAAATGAATGGGGCTGTCATCGATGAAGCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTGCTACTTTGAATATGCTGGCTACTGATAAACTTAATGGCAATAATTATACATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATT
TGTCCTAGTTGAGAACTGTTATCGAGTCCCAGCTGTTAATGCAACTCAAACTGTTCAAGAAGCATTATTGGCCAAGAAACATAAATCAATGCTCATTGCTCGTAAGATTA
TGGATTCCTTGCAAGAGATGTTTGGTAAATCCTTTTATCGAATCAAGCATGATGCTCTAAAATACATTTATAATGCCCGCATGAACGAGAGAGCCTCAGTACGAGAACAT
GTTCTCAATATGATGGTTCATTGCAATGTGGCAAAAATGAATGGGGCTGTCATCGATGAAGCCAGTTAG
Protein sequenceShow/hide protein sequence
MTSATLNMLATDKLNGNNYTSWKNTINTVLIIDDLRFVLVENCYRVPAVNATQTVQEALLAKKHKSMLIARKIMDSLQEMFGKSFYRIKHDALKYIYNARMNERASVREH
VLNMMVHCNVAKMNGAVIDEAS