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Pay0007734 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007734
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr11:10257911..10258387
RNA-Seq ExpressionPay0007734
SyntenyPay0007734
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035676.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-7089.74Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLNGDNYA  KSNLNTILVVDDLRF+LTEECPQT  SNANR SREAYDRWIKANEKA VYILASMSDVLAKKHE LATTKEI+DSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MK+G SVREHVLDMMMHFNI EVNG AIDEAN VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

KAA0043451.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-7898.1Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLN DNYAA KSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLAT KEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
        MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS

KAA0050552.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-7191.03Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLAS+KLNGDNYAA KSNLNTILVVDDLRF+LTEECPQT ASNANR SR+AYDRWIKANEKA VYILASM+DVLAKKHESLATTK+IMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MKEG SVRE+VLDMMMHFNIAEVNGSAIDEAN VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

KAA0054281.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-6989.74Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLA +KLNGDNYAA KSNLNT L+VDDLRFVLTEECPQT ASNANRTSR+AYDRWIKANEKAHVYI ASMSDVLAK+HESLATTKEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MKE  SVREHVLDMMMHFNIAEVNG AIDEA  VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

TYK24230.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-80100Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
        MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS

TrEMBL top hitse value%identityAlignment
A0A5A7T0E9 Gag/pol protein8.7e-7189.74Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLNGDNYA  KSNLNTILVVDDLRF+LTEECPQT  SNANR SREAYDRWIKANEKA VYILASMSDVLAKKHE LATTKEI+DSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MK+G SVREHVLDMMMHFNI EVNG AIDEAN VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

A0A5A7TPG6 Gag/pol protein6.6e-7998.1Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLN DNYAA KSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLAT KEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
        MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS

A0A5A7UL66 Gag/pol protein1.3e-6989.74Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLA +KLNGDNYAA KSNLNT L+VDDLRFVLTEECPQT ASNANRTSR+AYDRWIKANEKAHVYI ASMSDVLAK+HESLATTKEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MKE  SVREHVLDMMMHFNIAEVNG AIDEA  VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

A0A5D3D5J6 Gag/pol protein7.9e-7291.03Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLAS+KLNGDNYAA KSNLNTILVVDDLRF+LTEECPQT ASNANR SR+AYDRWIKANEKA VYILASM+DVLAKKHESLATTK+IMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS
        MFGQPEWSLRHE IKYIYTK MKEG SVRE+VLDMMMHFNIAEVNGSAIDEAN VS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVS

A0A5D3DLT3 Gag/pol protein5.4e-81100Show/hide
Query:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
        MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG
Subjt:  MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKG

Query:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
        MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS
Subjt:  MFGQPEWSLRHEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGCTCGATAGTTCAATTGTTAGCTTCCAAAAAACTTAACGGCGATAATTATGCGGCATTGAAATCAAATCTTAACACAATACTAGTGGTTGATGATTTAAGATT
TGTCTTAACTGAGGAATGTCCTCAAACCCTTGCCTCAAATGCAAATCGAACTAGTCGGGAGGCATATGATCGATGGATAAAGGCCAATGAGAAAGCCCATGTCTACATCC
TTGCTAGCATGTCTGATGTTTTAGCAAAGAAACATGAATCCTTAGCCACGACTAAAGAGATAATGGATTCATTAAAGGGAATGTTTGGGCAACCAGAATGGTCCCTAAGA
CACGAGGTAATCAAATACATTTACACTAAGCTAATGAAGGAGGGGATCTCTGTTAGAGAACATGTCTTGGACATGATGATGCACTTCAATATTGCTGAGGTAAATGGTAG
TGCCATCGATGAGGCTAATCATGTTAGTTTATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAGCTCGATAGTTCAATTGTTAGCTTCCAAAAAACTTAACGGCGATAATTATGCGGCATTGAAATCAAATCTTAACACAATACTAGTGGTTGATGATTTAAGATT
TGTCTTAACTGAGGAATGTCCTCAAACCCTTGCCTCAAATGCAAATCGAACTAGTCGGGAGGCATATGATCGATGGATAAAGGCCAATGAGAAAGCCCATGTCTACATCC
TTGCTAGCATGTCTGATGTTTTAGCAAAGAAACATGAATCCTTAGCCACGACTAAAGAGATAATGGATTCATTAAAGGGAATGTTTGGGCAACCAGAATGGTCCCTAAGA
CACGAGGTAATCAAATACATTTACACTAAGCTAATGAAGGAGGGGATCTCTGTTAGAGAACATGTCTTGGACATGATGATGCACTTCAATATTGCTGAGGTAAATGGTAG
TGCCATCGATGAGGCTAATCATGTTAGTTTATCTTAG
Protein sequenceShow/hide protein sequence
MNSSIVQLLASKKLNGDNYAALKSNLNTILVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANEKAHVYILASMSDVLAKKHESLATTKEIMDSLKGMFGQPEWSLR
HEVIKYIYTKLMKEGISVREHVLDMMMHFNIAEVNGSAIDEANHVSLS