CuGenDBv2

Gene ID	Pay0007744
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr03:15783362..15784049
RNA-Seq Expression	Pay0007744
Synteny	Pay0007744
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]

2.4e-64

61.14

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH +CEKV LT+LT  DDLMIFC  DEPS+ F+RE LQKF           KSS FV GV+NE ASHL A +    GNLP+R L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYAPLIQRITSRIRSWT R +  A  +                        HHEVDKIL SYL RGKEEGR  +KVAW +VCLPFEE 
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KIL L+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]

1.9e-66

62.01

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSFHFH +CEKV LTHLT  DDLMIFC  +EPS+ F+RE LQKF           KSS FV GV+NE ASHL   +    GNL VR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYAPLIQRITSRIRSWT R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

KAA0065355.1 F17F8.5 [Cucumis melo var. makuwa]

1.0e-67

65.07

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH++CEKV L HLT  DDLMIFC  DEPSLSF+RE LQKF           KSS FV  VSNE ASHL AS+    GNLPVR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWT------------VRCVCSA------------SSMHHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSND APLIQR+TSRIRSWT            VR V  +            + +H+EVDKILRSYL RGKEEGR  +KVAW EVCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWT------------VRCVCSA------------SSMHHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         +AIRDGPSWNIAST KILWLLL S GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

TYK26658.1 uncharacterized protein E5676_scaffold313G003080 [Cucumis melo var. makuwa]

1.1e-64

61.14

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSFHFH  CEKV LTHLT  DDLMIFC  +EPS+ F+RE L+KF           KSS FV GV+NE ASHL   +    GNL VR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYA LIQRITSRIRSWT R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]

1.2e-63

60.7

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH +CEKV LTHLT  DDLMIFC  DE S+ F+R+ LQKF           KSS FV GV+NE ASHL   +  A GNLPVR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSND APLIQRITS+IRSW  R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
           IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SPE5 Reverse transcriptase domain-containing protein

5.7e-64

60.7

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH +CEKV LTHLT  DDLMIFC  DE S+ F+R+ LQKF           KSS FV GV+NE ASHL   +  A GNLPVR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSND APLIQRITS+IRSW  R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
           IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

A0A5A7UV01 F17F8.5

1.1e-64

61.14

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH +CEKV LT+LT  DDLMIFC  DEPS+ F+RE LQKF           KSS FV GV+NE ASHL A +    GNLP+R L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYAPLIQRITSRIRSWT R +  A  +                        HHEVDKIL SYL RGKEEGR  +KVAW +VCLPFEE 
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KIL L+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

A0A5A7V3Z0 Reverse transcriptase domain-containing protein

9.3e-67

62.01

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Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSFHFH +CEKV LTHLT  DDLMIFC  +EPS+ F+RE LQKF           KSS FV GV+NE ASHL   +    GNL VR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYAPLIQRITSRIRSWT R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

A0A5A7VHU9 F17F8.5

5.0e-68

65.07

Show/hide

Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSF FH++CEKV L HLT  DDLMIFC  DEPSLSF+RE LQKF           KSS FV  VSNE ASHL AS+    GNLPVR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWT------------VRCVCSA------------SSMHHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSND APLIQR+TSRIRSWT            VR V  +            + +H+EVDKILRSYL RGKEEGR  +KVAW EVCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWT------------VRCVCSA------------SSMHHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         +AIRDGPSWNIAST KILWLLL S GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

A0A5D3DT20 Reverse transcriptase domain-containing protein

5.1e-65

61.14

Show/hide

Query:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL
        MEVLSRMLNK  QSFHFH  CEKV LTHLT  DDLMIFC  +EPS+ F+RE L+KF           KSS FV GV+NE ASHL   +    GNL VR L
Subjt:  MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKF-----------KSSTFVVGVSNEVASHLDASLAIALGNLPVRNL

Query:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG
        GLPLL GRLRSNDYA LIQRITSRIRSWT R +  A  +                        H+EVDKILRSYL RGKEEGR  +KVAW +VCLPFEEG
Subjt:  GLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSASSM------------------------HHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEG

Query:  RVAIRDGPSWNIASTSKILWLLLMSLGSL
         + IRDGPSWNIAST KILWL+L + GSL
Subjt:  RVAIRDGPSWNIASTSKILWLLLMSLGSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

6.3e-15

32.89

Show/hide

Query:  VVGVSNEVASHLDASLAIALGNLPVRNLGLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSA------SSMHH------------------EVDKILR
        + GV +   + +  S   A G LPVR LGLPLL  ++ ++DY PL+++I  RI  WT R +  A      SS+ H                  E+D I  
Subjt:  VVGVSNEVASHLDASLAIALGNLPVRNLGLPLLFGRLRSNDYAPLIQRITSRIRSWTVRCVCSA------SSMHH------------------EVDKILR

Query:  SYLSRGKEEGRRDVKVAWTEVCLPFEEGRVAIRD------GPSWNIASTSKI
        S+L  G E   +  KVAW++VC P +EG + IR       G  W+I+  + +
Subjt:  SYLSRGKEEGRRDVKVAWTEVCLPFEEGRVAIRD------GPSWNIASTSKI

Sequences

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CDS sequence

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ATGGAGGTTCTTTCTCGTATGCTGAATAAACCTCTCCAGAGTTTCCATTTTCATCAGCAATGTGAGAAGGTTAGCTTAACTCACTTGACTATTGTTGACGACCTTATGAT
ATTTTGTGTTACTGATGAGCCCTCTCTGAGTTTTGTTCGTGAGACTCTACAGAAGTTTAAAAGCTCTACTTTTGTTGTGGGGGTTAGTAATGAGGTTGCTTCCCATTTAG
ATGCTAGTTTGGCTATTGCCCTTGGGAACCTACCTGTTCGCAATCTTGGACTTCCTTTACTATTTGGTAGGTTACGTTCTAATGATTATGCTCCTCTTATTCAACGTATT
ACTAGTCGGATTCGATCTTGGACAGTTAGATGTGTTTGTTCTGCCTCCAGTATGCATCATGAGGTAGACAAGATACTAAGGTCTTATCTTAGTAGGGGTAAGGAGGAAGG
TAGAAGGGATGTTAAGGTGGCATGGACAGAAGTATGTCTTCCTTTCGAAGAGGGTAGAGTTGCTATCCGTGATGGGCCTTCTTGGAATATTGCGAGTACTTCGAAGATTC
TTTGGTTGTTGCTGATGAGTTTGGGATCTCTTTGA

mRNA sequence

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Protein sequence

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MEVLSRMLNKPLQSFHFHQQCEKVSLTHLTIVDDLMIFCVTDEPSLSFVRETLQKFKSSTFVVGVSNEVASHLDASLAIALGNLPVRNLGLPLLFGRLRSNDYAPLIQRI
TSRIRSWTVRCVCSASSMHHEVDKILRSYLSRGKEEGRRDVKVAWTEVCLPFEEGRVAIRDGPSWNIASTSKILWLLLMSLGSL

Pay0007744 (gene) of Melon (Payzawat) v1 genome