CuGenDBv2

Gene ID	Pay0007770
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic
Genome location	chr01:31954753..31956954
RNA-Seq Expression	Pay0007770
Synteny	Pay0007770
Gene Ontology terms	GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR003772 - Large ribosomal RNA subunit accumulation protein YceD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067976.1 uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa]

1.0e-223

99.48

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

TYK18147.1 uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa]

1.7e-207

94.33

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

XP_004136166.1 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic [Cucumis sativus]

2.9e-170

92.79

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA
        MLATFPTSSVVSSSHS EFINVFYF+SKG VSF+SHFRVPWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCKG+CLNCGINLNTGSC CSKQAV
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRRMQNNS
        KKNDFGPLG+LKRRMQNNS
Subjt:  KKNDFGPLGNLKRRMQNNS

XP_008451550.1 PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo]

1.2e-224

100

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

XP_008451552.1 PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo]

7.5e-211

95.62

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAY7 Uncharacterized protein

1.4e-170

92.79

Show/hide

Query:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA
        MLATFPTSSVVSSSHS EFINVFYF+SKG VSF+SHFRVPWR +RNIQPSLGDPCIKMKST+IKCVKPTYQSLFEDNSIITDW DQEGDIEEM SPWEGA
Subjt:  MLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGA

Query:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL
        +IYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCY CCEPAPECIFSNFSI+
Subjt:  VIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSIL

Query:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV
        LSEEPIEEPDVINMGIISG+D+FKTDNGNSDEDDEE +DLDDQLYFPP++KEIDISKNIRDILHLEITMNVIC+PGCKG+CLNCGINLNTGSC CSKQAV
Subjt:  LSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAV

Query:  KKNDFGPLGNLKRRMQNNS
        KKNDFGPLG+LKRRMQNNS
Subjt:  KKNDFGPLGNLKRRMQNNS

A0A1S3BR50 uncharacterized protein LOC103492797 isoform X2

3.6e-211

95.62

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A1S3BSU8 uncharacterized protein LOC103492797 isoform X1

5.7e-225

100

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A5A7VN29 Uncharacterized protein

4.9e-224

99.48

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

A0A5D3D2J4 Uncharacterized protein

8.3e-208

94.33

Show/hide

Query:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV
        MREEKSFHEFSHWIKFFRGASSKFPPFSRTS                 GTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYF+SKGNV
Subjt:  MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNV

Query:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
        SFNS  R PWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEM SPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS
Subjt:  SFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVS

Query:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
        KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD
Subjt:  KSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSD

Query:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
        EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS
Subjt:  EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

SwissProt top hits

e value

%identity

Alignment

A0A1D6HQ92 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

1.9e-55

53.7

Show/hide

Query:  MSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPE
        + SPWEGAV+Y+R+++V H+EY +TLERLGL  LS+  S++RA+ +GL   T D       TPV +SVDVTR+  +LRLDGIV+TVITL C+RC EPAP+
Subjt:  MSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR-VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPE

Query:  CIFSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGI
         IF+NFS+LL+E+P+ EEPD   +G I  +D    D G +      D ++ +D DD+L+FP  DKEIDISK+IRD++HLEIT++ +CNP CKG+CL CG 
Subjt:  CIFSNFSILLSEEPI-EEPDVINMGIISGQDIFKTDNGNSD----EDDEESVDLDDQLYFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGI

Query:  NLN-TGSCNCSKQAVK
        NLN T SC C  + V+
Subjt:  NLN-TGSCNCSKQAVK

Q9LT27 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic

3.6e-83

60.15

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Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+  SPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ
        SK+IRD++HLEIT+  IC+  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ +MQ
Subjt:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G19810.1 Protein of unknown function (DUF177)

2.6e-84

60.15

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Query:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV
        IK+   +   +  + +S  E ++I  DW DQE +IE+  SPWEG+V+Y+RN+SV+HVEYCTTLERLGL +LSTDVSK RAS MGLRVTKDVKDYP GTPV
Subjt:  IKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPV

Query:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI
        Q+SVDV RK KKLRLDGIV+TVITL C RC E   E IFSNFS+LL+EEP+EEPDVI++G   G D  K +  + D++D+  +D +D+L+FPP  KEIDI
Subjt:  QISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDI

Query:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ
        SK+IRD++HLEIT+  IC+  CKGMCL CG NLN   C+C ++  K   +GPLGNL+ +MQ
Subjt:  SKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQ

Sequences

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CDS sequence

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ATGCGAGAGGAAAAGTCCTTCCATGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGATGGGATTCTTTTCG
CTTGACTTCATTAGCTGATTACATAAAATTTGCAGGGACTGTGTTATTTGTATCTACGGAAATTCCTTTACCCACTTTCTGTCCCCATTCGTTTAAGATGCTAGCCACAT
TTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATGTATTCTACTTCGAATCTAAAGGGAATGTTTCTTTTAATTCACATTTTCGAGTTCCATGG
AGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATGAAATCTACTTCCATTAAGTGTGTGAAACCTACGTATCAATCCCTTTTTGAGGACAATTC
CATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGAGCTCACCTTGGGAAGGAGCAGTTATCTACAAGAGGAACTCTTCAGTTTCTCATGTGGAGTATT
GCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGACGATGGGTCTACGCGTAACGAAGGATGTGAAAGATTATCCCTTT
GGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTGAGGCTGGACGGAATAGTTAAAACTGTCATCACCCTGAATTGTTATAGGTGTTGTGAACC
TGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACCAATTGAAGAACCTGATGTCATAAATATGGGAATCATTAGCGGGCAGGATATATTCAAGA
CTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATGATCAACTCTATTTTCCTCCTGTGGACAAAGAGATAGATATATCAAAGAACATCAGAGAC
ATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAAGGTATGTGTCTAAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCA
GGCTGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGACGAATGCAGAACAATTCTTAA

mRNA sequence

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AAAAACTTTATGCGAGAGGAAAAGTCCTTCCATGAGTTCAGCCACTGGATAAAATTTTTCCGCGGAGCGTCATCGAAATTCCCACCATTTTCAAGAACCTCAGGATGGGA
TTCTTTTCGCTTGACTTCATTAGCTGATTACATAAAATTTGCAGGGACTGTGTTATTTGTATCTACGGAAATTCCTTTACCCACTTTCTGTCCCCATTCGTTTAAGATGC
TAGCCACATTTCCCACATCATCCGTAGTTTCATCTTCTCATTCCAAGGAATTTATTAATGTATTCTACTTCGAATCTAAAGGGAATGTTTCTTTTAATTCACATTTTCGA
GTTCCATGGAGATTTATGAGAAATATTCAGCCAAGCTTGGGTGACCCATGTATTAAGATGAAATCTACTTCCATTAAGTGTGTGAAACCTACGTATCAATCCCTTTTTGA
GGACAATTCCATTATTACTGATTGGGGAGATCAAGAAGGGGATATTGAGGAGATGAGCTCACCTTGGGAAGGAGCAGTTATCTACAAGAGGAACTCTTCAGTTTCTCATG
TGGAGTATTGCACAACATTAGAGAGGCTTGGGTTAGAGAAGCTTTCGACTGATGTCTCGAAATCTAGAGCATCGACGATGGGTCTACGCGTAACGAAGGATGTGAAAGAT
TATCCCTTTGGAACACCTGTTCAAATCTCTGTTGATGTCACAAGGAAAGATAAAAAGTTGAGGCTGGACGGAATAGTTAAAACTGTCATCACCCTGAATTGTTATAGGTG
TTGTGAACCTGCTCCTGAATGCATTTTCTCAAATTTCTCCATTTTACTAAGCGAAGAACCAATTGAAGAACCTGATGTCATAAATATGGGAATCATTAGCGGGCAGGATA
TATTCAAGACTGATAATGGAAATAGTGACGAAGATGATGAAGAGTCGGTAGATTTGGATGATCAACTCTATTTTCCTCCTGTGGACAAAGAGATAGATATATCAAAGAAC
ATCAGAGACATCTTGCATCTAGAAATTACTATGAATGTGATATGTAATCCGGGATGCAAAGGTATGTGTCTAAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTG
TAGTAAGCAGGCTGTAAAGAAGAATGATTTTGGTCCTCTTGGAAATTTGAAAAGACGAATGCAGAACAATTCTTAA

Protein sequence

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MREEKSFHEFSHWIKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPW
RFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKDVKDYPF
GTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRD
ILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS

Pay0007770 (gene) of Melon (Payzawat) v1 genome