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Pay0007796 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007796
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCCT-eta
Genome locationchr10:25946977..25948805
RNA-Seq ExpressionPay0007796
SyntenyPay0007796
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0007165 - signal transduction (biological process)
GO:0005832 - chaperonin-containing T-complex (cellular component)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002423 - Chaperonin Cpn60/TCP-1 family
IPR017998 - Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 - GroEL-like apical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054206.1 chaperonin family protein [Cucumis melo var. makuwa]2.1e-2993.33Show/hide
Query:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        R +   VPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

KAA0055682.1 T-complex protein 1 subunit eta [Cucumis melo var. makuwa]1.2e-2795.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

TYK15057.1 chaperonin family protein [Cucumis melo var. makuwa]2.1e-2993.33Show/hide
Query:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        R +   VPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

XP_008451070.1 PREDICTED: T-complex protein 1 subunit eta [Cucumis melo]1.2e-2795.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

XP_038878925.1 T-complex protein 1 subunit eta [Benincasa hispida]1.2e-2795.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

TrEMBL top hitse value%identityAlignment
A0A0A0LZU0 CCT-eta5.7e-2895.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

A0A5A7UIK7 CCT-eta5.7e-2895.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

A0A5A7UIV7 Chaperonin family protein1.0e-2993.33Show/hide
Query:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        R +   VPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

A0A5D3CF02 CCT-eta5.7e-2895.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGGTMRDS LVNGVAFKKTFS+AGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

A0A5D3CT02 Chaperonin family protein1.0e-2993.33Show/hide
Query:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        R +   VPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  RELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

SwissProt top hitse value%identityAlignment
O77323 T-complex protein 1 subunit eta1.0e-2170.83Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KV GG+  D+ L+ GVAFKKTFS+AGFEQQPKKF NPKILLLN+ELELK+EKENAE+R+ +P++Y SIV A
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

P42943 T-complex protein 1 subunit eta1.2e-2270.83Show/hide
Query:  EKVPGGTMRDSL-VNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +K+PGG M +SL +NGVAFKKTFS+AGFEQQPKKF+NPKIL LN+ELELK+EK+NAE+R+     YQ+IVDA
Subjt:  EKVPGGTMRDSL-VNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

P54409 T-complex protein 1 subunit eta1.6e-2277.14Show/hide
Query:  VPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        V GG++ DS LV GVAFKKTFS+AGFEQQPKKF+NPKI LLNIELELK+EKENAEIR+ +P  Y+SIVDA
Subjt:  VPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

P54410 T-complex protein 1 subunit eta (Fragment)1.2e-2277.14Show/hide
Query:  VPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        V GG++ DS LV+GVAFKKTFS+AGFEQQPKKF+NPKI LLNIELELK+EKENAEIR+ +P  Y+SIVDA
Subjt:  VPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

Q9SF16 T-complex protein 1 subunit eta1.1e-2891.67Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGG MRDS LV+GVAFKKTFS+AGFEQQPKKF NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

Arabidopsis top hitse value%identityAlignment
AT3G11830.1 TCP-1/cpn60 chaperonin family protein7.9e-3091.67Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGG MRDS LV+GVAFKKTFS+AGFEQQPKKF NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA

AT3G11830.2 TCP-1/cpn60 chaperonin family protein7.9e-3091.67Show/hide
Query:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
        +KVPGG MRDS LV+GVAFKKTFS+AGFEQQPKKF NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA
Subjt:  EKVPGGTMRDS-LVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAACTTGGGGAGAAGGTTCCTGGAGGGACCATGCGTGACTCCTTGGTAAATGGTGTTGCCTTCAAGAAGACATTTTCTCATGCAGGTTTCGAACAACAACCTAA
GAAGTTTTCAAATCCAAAAATTCTCTTGCTAAATATTGAATTGGAATTGAAATCGGAGAAAGAAAATGCAGAGATACGGCTCTCTGATCCGTCACAGTATCAGTCCATTG
TTGATGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAACTTGGGGAGAAGGTTCCTGGAGGGACCATGCGTGACTCCTTGGTAAATGGTGTTGCCTTCAAGAAGACATTTTCTCATGCAGGTTTCGAACAACAACCTAA
GAAGTTTTCAAATCCAAAAATTCTCTTGCTAAATATTGAATTGGAATTGAAATCGGAGAAAGAAAATGCAGAGATACGGCTCTCTGATCCGTCACAGTATCAGTCCATTG
TTGATGCATAA
Protein sequenceShow/hide protein sequence
MRELGEKVPGGTMRDSLVNGVAFKKTFSHAGFEQQPKKFSNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDA