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Pay0007994 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0007994
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionDNA polymerase epsilon catalytic subunit A-like
Genome locationchr09:7306396..7307997
RNA-Seq ExpressionPay0007994
SyntenyPay0007994
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040604.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]9.6e-36100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
TYK05646.1 DNA polymerase epsilon catalytic subunit A-like [Cucumis melo var. makuwa]1.1e-23100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
XP_008465670.1 PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis melo]6.4e-72100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK

Query:  YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
        YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
Subjt:  YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
XP_022137384.1 DNA polymerase epsilon catalytic subunit A-like isoform X1 [Momordica charantia]4.8e-1965.82Show/hide
Query:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        T  + +S +RRR+ T N+K KK+RI++S   EEE+ESKFGF LFSEGDKRLGWLLTF PSS K++DT K++SCIDLYFV
Subjt:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
XP_022137385.1 DNA polymerase epsilon catalytic subunit A-like isoform X2 [Momordica charantia]4.8e-1965.82Show/hide
Query:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        T  + +S +RRR+ T N+K KK+RI++S   EEE+ESKFGF LFSEGDKRLGWLLTF PSS K++DT K++SCIDLYFV
Subjt:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
TrEMBL top hitse value%identityAlignment
A0A1S3CPC4 DNA polymerase epsilon catalytic subunit A-like3.1e-72100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQK

Query:  YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
        YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
Subjt:  YVITYRSLVCFLWLYHVLVLCIDNEENNDVNVVEKNGN
A0A5A7TAW8 DNA polymerase epsilon catalytic subunit4.6e-36100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYF
A0A5D3C5I4 DNA polymerase epsilon catalytic subunit5.3e-24100Show/hide
Query:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
        MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
Subjt:  MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTP
A0A6J1C6H8 DNA polymerase epsilon catalytic subunit2.3e-1965.82Show/hide
Query:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        T  + +S +RRR+ T N+K KK+RI++S   EEE+ESKFGF LFSEGDKRLGWLLTF PSS K++DT K++SCIDLYFV
Subjt:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
A0A6J1C732 DNA polymerase epsilon catalytic subunit2.3e-1965.82Show/hide
Query:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        T  + +S +RRR+ T N+K KK+RI++S   EEE+ESKFGF LFSEGDKRLGWLLTF PSS K++DT K++SCIDLYFV
Subjt:  TNQMRSSVNRRRDFTVNYKWKKKRIIQS--VEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
SwissProt top hitse value%identityAlignment
F4HW04 DNA polymerase epsilon catalytic subunit A3.9e-1656.16Show/hide
Query:  SSVNRRRDFTVNYKWKKK-RIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        S  NRRRD   + +W KK +++ + E+E+ESK GF LFSEG+ RLGWLLTF+ SS ++ DT K++SC+DLYFV
Subjt:  SSVNRRRDFTVNYKWKKK-RIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
F4IFN6 DNA polymerase epsilon catalytic subunit B5.0e-1160Show/hide
Query:  SVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        S  +E+E+K GF LFS+G+ RLGWLLTF  SS ++ DT K FSC+DL+FV
Subjt:  SVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
Arabidopsis top hitse value%identityAlignment
AT1G08260.1 DNA polymerase epsilon catalytic subunit2.8e-1756.16Show/hide
Query:  SSVNRRRDFTVNYKWKKK-RIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        S  NRRRD   + +W KK +++ + E+E+ESK GF LFSEG+ RLGWLLTF+ SS ++ DT K++SC+DLYFV
Subjt:  SSVNRRRDFTVNYKWKKK-RIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
AT2G27120.1 DNA polymerase epsilon catalytic subunit3.5e-1260Show/hide
Query:  SVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV
        S  +E+E+K GF LFS+G+ RLGWLLTF  SS ++ DT K FSC+DL+FV
Subjt:  SVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATCAGATGAGGAGTAGTGTAAACCGAAGGCGAGACTTCACAGTCAACTATAAGTGGAAGAAGAAAAGGATAATCCAGTCAGTTGAAGAGGAGGTTGAATCAAA
GTTTGGATTCAATCTCTTCTCTGAAGGCGACAAGAGGCTGGGATGGTTGCTCACTTTCACTCCTTCATCTTGCAAGAATGAGGACACTGAAAAAATCTTCAGTTGCATCG
ATCTTTATTTTGTACACAGGATGGCGGCAGTTTCAAATCAAAATATAAGTTTTGTCCTTATTTTTATGCAGCCACAAAAGTATGTAATCACATACAGAAGCCTTGTTTGC
TTTTTATGGTTATATCATGTTTTGGTACTATGTATTGACAATGAGGAGAATAATGATGTAAATGTTGTAGAAAAAAATGGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATCAGATGAGGAGTAGTGTAAACCGAAGGCGAGACTTCACAGTCAACTATAAGTGGAAGAAGAAAAGGATAATCCAGTCAGTTGAAGAGGAGGTTGAATCAAA
GTTTGGATTCAATCTCTTCTCTGAAGGCGACAAGAGGCTGGGATGGTTGCTCACTTTCACTCCTTCATCTTGCAAGAATGAGGACACTGAAAAAATCTTCAGTTGCATCG
ATCTTTATTTTGTACACAGGATGGCGGCAGTTTCAAATCAAAATATAAGTTTTGTCCTTATTTTTATGCAGCCACAAAAGTATGTAATCACATACAGAAGCCTTGTTTGC
TTTTTATGGTTATATCATGTTTTGGTACTATGTATTGACAATGAGGAGAATAATGATGTAAATGTTGTAGAAAAAAATGGAAACTGA
Protein sequenceShow/hide protein sequence
MTNQMRSSVNRRRDFTVNYKWKKKRIIQSVEEEVESKFGFNLFSEGDKRLGWLLTFTPSSCKNEDTEKIFSCIDLYFVHRMAAVSNQNISFVLIFMQPQKYVITYRSLVC
FLWLYHVLVLCIDNEENNDVNVVEKNGN