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Pay0008023 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0008023
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionGag/pol protein
Genome locationchr08:26855864..26868102
RNA-Seq ExpressionPay0008023
SyntenyPay0008023
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065537.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.5e-07100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
XP_016903349.1 PREDICTED: uncharacterized protein LOC107992139 isoform X1 [Cucumis melo]1.6e-57100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  DLGYYLQKKG
        DLGYYLQKKG
Subjt:  DLGYYLQKKG
XP_016903350.1 PREDICTED: uncharacterized protein LOC107992139 isoform X2 [Cucumis melo]2.2e-43100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
XP_016903351.1 PREDICTED: uncharacterized protein LOC107992139 isoform X3 [Cucumis melo]4.2e-58100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  DLGYYLQKKGE
        DLGYYLQKKGE
Subjt:  DLGYYLQKKGE
XP_016903352.1 PREDICTED: uncharacterized protein LOC107992139 isoform X4 [Cucumis melo]1.7e-5199.01Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  D
        +
Subjt:  D
TrEMBL top hitse value%identityAlignment
A0A1S4E542 uncharacterized protein LOC107992139 isoform X32.0e-58100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  DLGYYLQKKGE
        DLGYYLQKKGE
Subjt:  DLGYYLQKKGE
A0A1S4E544 uncharacterized protein LOC107992139 isoform X17.7e-58100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  DLGYYLQKKG
        DLGYYLQKKG
Subjt:  DLGYYLQKKG
A0A1S4E554 uncharacterized protein LOC107992139 isoform X48.3e-5299.01Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLG

Query:  D
        +
Subjt:  D
A0A1S4E5U6 uncharacterized protein LOC107992139 isoform X21.1e-43100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYL
A0A5A7VEM3 Putative Retrotransposon protein7.3e-08100Show/hide
Query:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
        MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
Subjt:  MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAAGACAAGGAGTTTGAAACATAAACTTCTATGTAGTTCACTACGCACATCTCTGGTTTTCTTATTGATTTTAAGCTACACAAACAGAATTAAGAGA
GAAGACAGGGCAGATTGTTTTCACGCGAAATCAGAAGATCTCTGGTTTTTTAGTACTTCAAGGTGTACCGGTGGCGTTAGGATCTATATTTGGGACAAGTTAAAG
GGATCGTGGTATACGCGATTGTTGGAGTGGTTCTGTTTCGACGGATATCTGAGATTATACAAAGTGAATCAGAATTTCATGTCTCTAGGCGATTTAGGTTACTAT
CTTCAAAAGAAAGGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGAAGACAAGGAGTTTGAAACATAAACTTCTATGTAGTTCACTACGCACATCTCTGGTTTTCTTATTGATTTTAAGCTACACAAACAGAATTAAGAGA
GAAGACAGGGCAGATTGTTTTCACGCGAAATCAGAAGATCTCTGGTTTTTTAGTACTTCAAGGTGTACCGGTGGCGTTAGGATCTATATTTGGGACAAGTTAAAG
GGATCGTGGTATACGCGATTGTTGGAGTGGTTCTGTTTCGACGGATATCTGAGATTATACAAAGTGAATCAGAATTTCATGTCTCTAGGCGATTTAGGTTACTAT
CTTCAAAAGAAAGGGGAATGA
Protein sequenceShow/hide protein sequence
MLKKTRSLKHKLLCSSLRTSLVFLLILSYTNRIKREDRADCFHAKSEDLWFFSTSRCTGGVRIYIWDKLKGSWYTRLLEWFCFDGYLRLYKVNQNFMSLGDLGYY
LQKKGE