; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0008033 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0008033
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionIntegrase
Genome locationchr03:9402794..9403513
RNA-Seq ExpressionPay0008033
SyntenyPay0008033
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038926.1 integrase [Cucumis melo var. makuwa]5.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0048003.1 integrase [Cucumis melo var. makuwa]5.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0057291.1 integrase [Cucumis melo var. makuwa]5.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

KAA0060377.1 integrase [Cucumis melo var. makuwa]5.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

TYJ95504.1 integrase [Cucumis melo var. makuwa]5.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

TrEMBL top hitse value%identityAlignment
A0A5A7TWN2 Integrase2.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5A7UDP7 Integrase2.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3CLV1 Integrase2.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3D538 Integrase2.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

A0A5D3E3T2 Integrase2.9e-134100Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
        KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKD

Query:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
        GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV
Subjt:  GEVIVKYCKTQDQVADIFTKALKFDLFVKFRGKLGVAQV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-4342.99Show/hide
Query:  RSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVMFGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSW
        RSL+G LMY +  TRPD+  AV++LSR+ +      W+  KRVLRY+ GTI+  + +KK    E+ + G+ DSDW G+  D KST+GY+F M    +  W
Subjt:  RSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKK--VSESVMFGFCDSDWGGNVDDHKSTSGYVFSM-GSGVFSW

Query:  TSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADI
         +K+Q+ VA S+TEAEY++L  A  +ALWL+++L  +    +    ++ DN   I+++ NP  H R+KHI IKYHF R+ V++  + ++Y  T++Q+ADI
Subjt:  TSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADI

Query:  FTKALKFDLFVKFRGKLGVAQ
        FTK L    FV+ R KLG+ Q
Subjt:  FTKALKFDLFVKFRGKLGVAQ

P0CV72 Secreted RxLR effector protein 1615.9e-2846.88Show/hide
Query:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS
        Y S VG++MYL   TRPD+  AV +LS+F ++P  +HW+A KRVLRY+  T  +G+ + +   + + G+ D+DW G+V+  +STSGY+F +  G  SW S
Subjt:  YRSLVGSLMYL-TATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS

Query:  KKQSVVALSTTEAEYISLAAAGCQALWL
        KKQ  VALS+TE EY++L+ A  +A+WL
Subjt:  KKQSVVALSTTEAEYISLAAAGCQALWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-4546.19Show/hide
Query:  YRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS
        Y S VGSLMY +  TRPDI  AV ++SRF+ NP + HWEA K +LRY+ GT    + +   S+ ++ G+ D+D  G++D+ KS++GY+F+   G  SW S
Subjt:  YRSLVGSLMY-LTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFSWTS

Query:  KKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT
        K Q  VALSTTEAEYI+    G + +WL+  L+EL   QK E V++CD+ SAI LSKN ++H R+KHI ++YH+IR++V D  + V    T +  AD+ T
Subjt:  KKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFT

Query:  KAL---KFDL
        K +   KF+L
Subjt:  KAL---KFDL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.2e-5046.64Show/hide
Query:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS
        DP+ YR +VGSL YL  TRPDI +AV+ LS+FM  P   H +A KR+LRY+ GT N GI+ KK +   +  + D+DW G+ DD+ ST+GY+  +G    S
Subjt:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS

Query:  WTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVAD
        W+SKKQ  V  S+TEAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI I YHFIR+ V+ G + V +  T DQ+AD
Subjt:  WTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVAD

Query:  IFTKALKFDLFVKFRGKLGVAQV
          TK L    F  F  K+GV +V
Subjt:  IFTKALKFDLFVKFRGKLGVAQV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE29.4e-5045.74Show/hide
Query:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS
        DP+ YR +VGSL YL  TRPD+ +AV+ LS++M  P   HW A KRVLRY+ GT + GI+ KK +   +  + D+DW G+ DD+ ST+GY+  +G    S
Subjt:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS

Query:  WTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVAD
        W+SKKQ  V  S+TEAEY S+A    +  W+  +L EL        V++CDN  A  L  NPVFH R KHI + YHFIR+ V+ G + V +  T DQ+AD
Subjt:  WTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVAD

Query:  IFTKALKFDLFVKFRGKLGVAQV
          TK L    F  F  K+GV +V
Subjt:  IFTKALKFDLFVKFRGKLGVAQV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.2e-3740.31Show/hide
Query:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH
        MD ++       G+ VD   YR L+G LMYL  TR DI FAV+ LS+F   P+ +H +A  ++L YI GT+  G++Y   +E  +  F D+ +    D  
Subjt:  MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDH

Query:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD
        +ST+GY   +G+ + SW SKKQ VV+ S+ EAEY +L+ A  + +WL    +EL+      T+LFCDN +AI ++ N VFH R+KHI    H +R+
Subjt:  KSTSGYVFSMGSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRD

ATMG00240.1 Gag-Pol-related retrotransposon family protein4.7e-1239.74Show/hide
Query:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGY
        MYLT TRPD+ FAV+ LS+F +  + +  +A  +VL Y+ GT+  G++Y   S+  +  F DSDW    D  +S +G+
Subjt:  MYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein2.6e-2643.85Show/hide
Query:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS
        DPS +RS+VG+L YLT TRPDI +AV+++ + M  P  + ++  KRVLRY+ GTI  G+Y  K S+  +  FCDSDW G     +ST+G+   +G  + S
Subjt:  DPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSMGSGVFS

Query:  WTSKKQSVVALSTTEAEYISLAAAGCQALW
        W++K+Q  V+ S+TE EY +LA    +  W
Subjt:  WTSKKQSVVALSTTEAEYISLAAAGCQALW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGA
TATTTTATTTGCCGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTCTTCGTTATATTCTTGGCACCATTAATTTTG
GAATTTATTACAAGAAAGTTTCAGAATCAGTGATGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATG
GGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCT
TCGGTGGATGTTAAAAGAATTGAAGTGTATTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAA
GCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAG
GCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAAATTTGAAATTGTGCAAGGATGATATTGGAGAAGCAGTCGATCCAAGTTTATATCGAAGCTTAGTTGGAAGCTTAATGTATTTGACAGCAACAAGACCTGA
TATTTTATTTGCCGTAAGTATGTTAAGCAGATTTATGACAAACCCGAAAAGAAGTCATTGGGAAGCAGGAAAAAGAGTTCTTCGTTATATTCTTGGCACCATTAATTTTG
GAATTTATTACAAGAAAGTTTCAGAATCAGTGATGTTTGGTTTTTGTGATAGTGACTGGGGTGGTAATGTGGATGATCATAAAAGTACATCTGGTTATGTTTTTAGTATG
GGTTCAGGTGTTTTTTCATGGACTTCAAAGAAACAATCTGTTGTTGCCCTTTCTACAACCGAAGCAGAATATATCTCGTTAGCTGCAGCTGGATGTCAAGCTTTATGGCT
TCGGTGGATGTTAAAAGAATTGAAGTGTATTCAAAAATGTGAAACTGTTTTATTTTGTGATAATGGATCTGCCATAGCATTATCAAAGAATCCAGTTTTCCATGGAAGAA
GCAAGCATATTAGAATCAAATATCATTTTATCAGAGACTTGGTTAAAGATGGAGAAGTGATAGTAAAATATTGCAAGACTCAAGATCAAGTGGCTGATATTTTTACAAAG
GCGCTCAAGTTTGACTTATTTGTTAAATTCAGAGGAAAACTTGGAGTTGCTCAAGTTTAG
Protein sequenceShow/hide protein sequence
MDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATRPDILFAVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVMFGFCDSDWGGNVDDHKSTSGYVFSM
GSGVFSWTSKKQSVVALSTTEAEYISLAAAGCQALWLRWMLKELKCIQKCETVLFCDNGSAIALSKNPVFHGRSKHIRIKYHFIRDLVKDGEVIVKYCKTQDQVADIFTK
ALKFDLFVKFRGKLGVAQV