| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 68.23 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 68.15 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 68.23 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 67.77 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
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| TYJ97618.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 79.64 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQI HDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: ----------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEG
NKANLAAAKTTKK+KA KGICFH NQEGHWKRNCPKYLAEKKKAKQG HINLNRIERLVKNG+LSELEENSLP+CESCLEG
Subjt: ----------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEG
Query: KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
Subjt: KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
Query: LMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
LMEC I+SQLSAPGTPQQNGVSERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
Subjt: LMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
Query: LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-----------------------------------------------
LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-----------------------------------------------
Query: --------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
Subjt: --------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
Query: TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
Subjt: TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
Query: DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
Subjt: DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
Query: FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQ
FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYTDSDFQ
Subjt: FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQ
Query: TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
Subjt: TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
Query: LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SMH8 Gag/pol protein | 0.0e+00 | 68.23 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| A0A5A7TZD7 Gag/pol protein | 0.0e+00 | 68.23 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| A0A5A7UGV2 Gag/pol protein | 0.0e+00 | 67.77 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
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| A0A5D3BHG7 Gag/pol protein | 0.0e+00 | 79.64 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQI HDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: ----------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEG
NKANLAAAKTTKK+KA KGICFH NQEGHWKRNCPKYLAEKKKAKQG HINLNRIERLVKNG+LSELEENSLP+CESCLEG
Subjt: ----------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLPVCESCLEG
Query: KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARG FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
Subjt: KMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNY
Query: LMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
LMEC I+SQLSAPGTPQQNGVSERRNRTLLDMVRSM+SYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
Subjt: LMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKK
Query: LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-----------------------------------------------
LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: LEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI-----------------------------------------------
Query: --------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
Subjt: --------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGY
Query: TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
Subjt: TQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGF
Query: DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
Subjt: DQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP
Query: FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQ
FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYTDSDFQ
Subjt: FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQ
Query: TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
Subjt: TDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH
Query: LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: LIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| A0A5D3CPJ6 Gag/pol protein | 0.0e+00 | 68.15 | Show/hide |
Query: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
MLTAREIMDSLQEMFGQASYQIKHDALKYIYNA+MN AEM
Subjt: MLTAREIMDSLQEMFGQASYQIKHDALKYIYNAQMNR-----------------AEM-------------------------------------------
Query: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
NKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Subjt: -------------------------------------------------------NKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Query: QGKYDLLVLET-----------------------------------------------------------------------------------------
QGKYDLLVLET
Subjt: QGKYDLLVLET-----------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
W HINLNRIERLVKNGLLSELEENSLPVCE
Subjt: ------------------------------------------------------------------W-----HINLNRIERLVKNGLLSELEENSLPVCE
Query: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Subjt: SCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL
Query: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Subjt: KFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLE
Query: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI
Subjt: NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKI------------------------------------------
Query: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Subjt: -------------------------------DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Query: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Subjt: KSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDI----------ATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK
Query: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA DLILTGYT
Subjt: RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA---------------------------------------DLILTGYT
Query: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Subjt: DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHI
Query: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
Subjt: ERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGLRDMPHLT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.1e-111 | 29.09 | Show/hide |
Query: INLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEK
+ + R LL+ L E S +CE CL GK + PF K H K PL +VHSD+CGP+ YF+ F D ++ Y YL+++KS+
Subjt: INLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEK
Query: FKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKS
F+++ A+ E + + D G EY+ + + + ++ GI L+ P TPQ NGVSER RT+ + R+M+S A L SFWG AV TA Y++N +PS++
Subjt: FKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKS
Query: V---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------TRGGYFYD----------
+ S+TP ++W+ +K L+H R++G +V ++N K + +S +FVGY P G +R F
Subjt: V---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY-PKG--------------------------TRGGYFYD----------
Query: ----------------------------------------PKDNKVFVST---------------------NATFLEE-------DHIR-----------
P D++ + T N FL E DH+
Subjt: ----------------------------------------PKDNKVFVST---------------------NATFLEE-------DHIR-----------
Query: ------EHKPRSKID-----------------------------------------------PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ
EH ID P +F + DK W +A+N EL + N+ W + +
Subjt: ------EHKPRSKID-----------------------------------------------PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ
Query: PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPG
P+ + +W++ K G +KARLVA+G+TQ +DYEETF+PVA + S R +LS+ ++ ++ QMDVKTAFLNG L+E IYM+ P+G I
Subjt: PDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPG
Query: QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGND----------IATQFQMKDLGEAQFVLG
+CKLN++IYGLKQA+R W F+ A+K F + C+Y K IN+++ +++LYVDD+++ D + +F+M DL E + +G
Subjt: QEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGND----------IATQFQMKDLGEAQFVLG
Query: IQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYADLILT-----
I+I + + + LSQ++Y+ KI+ K++M+N P + + S E C + P S +G LMY MLCTRPD+ A IL+
Subjt: IQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYADLILT-----
Query: -------------------------------------GYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
GY DSD+ RKST+G +F + + + W + +Q +A S+ EAEY+A EA +EA+WL+
Subjt: -------------------------------------GYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLR
Query: NFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL
L + + + PI +Y DN G ++ + P HKR KHI+ KYH RE V + + I + + +AD FTKPL A F + LGL
Subjt: NFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKVFEGHLESLGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-167 | 36.33 | Show/hide |
Query: DLLVLETWHINLNR-----IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
D + ++ WH + ++ L K L+S + ++ C+ CL GK + F R L+LV+SD+CGPM +++ GG +YF+TF DD SR +VY
Subjt: DLLVLETWHINLNR-----IERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Query: LMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTA
+++ K + + F+++ A VE + +K RSD GGEY +F+ Y GI + + PGTPQ NGV+ER NRT+++ VRSM+ A LP SFWG AVQTA
Subjt: LMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTA
Query: VYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE----------
Y++N PS ++ E P ++W ++ S H +++GC AHV + KL+ +S C+F+GY G +DP KV S + F E
Subjt: VYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE----------
Query: ---------------------------DHIRE-------------------------------HKP-----RSKI-----------------DPLTFKKA
D + E H+P R ++ +P + K+
Subjt: ---------------------------DHIRE-------------------------------HKP-----RSKI-----------------DPLTFKKA
Query: MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYE
+ +K++ +KAM E+ES+ N + LV+ P G +P+ CKW++K K+ D K+ +KARLV KG+ Q +G+D++E FSPV + SIR +LS+AA D E
Subjt: MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYE
Query: IWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIG-
+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++ +CKLN+S+YGLKQA R W ++FD+ +KS + + +PCVY KR + L+LYVDD+L++G
Subjt: IWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDILLIG-
Query: ---------NDIATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS
D++ F MKDLG AQ +LG++I R+R ++ L LSQ YI++++ +++M+N+K P + LSK+ CP T ++ M +PY+SAVGS
Subjt: ---------NDIATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS
Query: LMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIAD
LMYAM+CTRPDI +A D IL GYTD+D D D+RKS++G +FT +GGA+ W+S Q C+A
Subjt: LMYAMLCTRPDICYA---------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIAD
Query: STMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
ST EAEY+AA E KE +WL+ FL +L + K +YCD+ A+ S+ H R KHI+ +YH IRE+V + V +I++ N AD TK +
Subjt: STMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAK
Query: VFEGHLESLGL
FE E +G+
Subjt: VFEGHLESLGL
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 5.8e-25 | 26.43 | Show/hide |
Query: EKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGF
+ K + Y L+ H N I++ +K ++ L+E+ + C CL GK TK KG R K EP + +H+D+ GP++ +
Subjt: EKKKAKQGKYDLLVLETWHINLNRIERLVKNGLLSELEENSLP-------VCESCLEGKMTKRPFTGKGHRAK-----EPLELVHSDLCGPMNVKARGGF
Query: EYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRS
YFI+FTD+ +R+ +VY + + E L F A ++N + + + DRG EY + + GI + + + +GV+ER NRTLL+ R+
Subjt: EYFITFTDDYSRYGYVYLMQHKSE--ALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRS
Query: MMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVS
++ + LPN W AV+ + I N + S ++ + G G + +G P V +NP K+ PR + + + G Y P K +
Subjt: MMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKG-SLRHFRIWGCPAHVLENNP-KKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVS
Query: TNATFLEEDHIREHKPRSKIDPLTFKKAMEDVD
TN L+++ +SK+D + D D
Subjt: TNATFLEEDHIREHKPRSKIDPLTFKKAMEDVD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.0e-93 | 25.79 | Show/hide |
Query: TWHINLNR-----IERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
+WH L + ++ N LS L + C CL K K PF+ + PLE ++SD+ + + + Y++ F D ++RY ++Y ++ K
Subjt: TWHINLNR-----IERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHK
Query: SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN
S+ E F +K +EN I TF SD GGE++ L Y + GI S P TP+ NG+SER++R +++ +++S+A +P ++W YA AVY++N
Subjt: SEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILN
Query: CVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE---------------E
+P+ + E+P + G + R++GC + + N KL+ +S+ C+F+GY + +++++S + F E +
Subjt: CVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLE---------------E
Query: DHIREH----------------------------------------------------------------------------------------------
+ RE
Subjt: DHIREH----------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------KPRSKI----------DPLTFKKA
KP K +P T +A
Subjt: ----------------------------------------------------------------------------KPRSKI----------DPLTFKKA
Query: MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDY
++D + W AM E+ + N WDLV P V +GC+WI+ +K +DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A +
Subjt: MEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDY
Query: EIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGN
I Q+DV AFL G L + +YM QP GFI + +CKL +++YGLKQA R+W + + + GF V + ++ KS+ ++++YVDDIL+ GN
Subjt: EIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGN
Query: D----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS
D ++ +F +KD E + LGI+ R L LSQ YI ++ + +M +K P LS K E Y VGS
Subjt: D----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGS
Query: LMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIA
L Y + TRPDI YA L L Y+D+D+ D+D ST+G + L + W S KQ +
Subjt: LMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIA
Query: DSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTA
S+ EAEY + + E W+ + L +L + +++P +YCDN GA P H R KHI YH IR V G + V +++ +AD TKPL+
Subjt: DSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTA
Query: KVFEGHLESLGLRDMP
F+ +G+ +P
Subjt: KVFEGHLESLGLRDMP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.7e-93 | 25.81 | Show/hide |
Query: TWHINLNRIERLVKNGLLSELEENSLPV---------CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLM
+WH L + N ++S +SLPV C C K K PF+ + +PLE ++SD+ + + + Y++ F D ++RY ++Y +
Subjt: TWHINLNRIERLVKNGLLSELEENSLPV---------CESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLM
Query: QHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY
+ KS+ + F +K+ VEN I T SD GGE++ L+ +YL + GI S P TP+ NG+SER++R +++M +++S+A +P ++W YA AVY
Subjt: QHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVY
Query: ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGY------------PKG-------------------------
++N +P+ + ++P + G+ + +++GC + + N KLE +SK C F+GY P G
Subjt: ILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGY------------PKG-------------------------
Query: ---------------------------------------------------------------------------------------------TRGGYFY
+
Subjt: ---------------------------------------------------------------------------------------------TRGGYFY
Query: DPKDN-------------------KVFVSTNATFLEEDH-----------------------------IREH-----------KPRSKI----------D
+P N + T +T + E + + H KP K +
Subjt: DPKDN-------------------KVFVSTNATFLEEDH-----------------------------IREH-----------KPRSKI----------D
Query: PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
P T +AM+D D W +AM E+ + N WDLV P V +GC+WI+ +K +DG + +KARLVAKGY Q G+DY ETFSPV SIRI+L
Subjt: PLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
Query: IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD
+A + I Q+DV AFL G L + +YM QP GF+ + +C+L ++IYGLKQA R+W + T + + GF + + ++ +S+ ++++YVD
Subjt: IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVD
Query: DILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP
DIL+ GND ++ +F +K+ + + LGI+ R + L LSQ Y ++ + +M +K P L+ K P E
Subjt: DILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIP
Query: YASAVGSLMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS
Y VGSL Y + TRPD+ YA L L Y+D+D+ D D ST+G + L + W S
Subjt: YASAVGSLMYAMLCTRPDICYA----------------------------------------DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRS
Query: IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP
KQ + S+ EAEY + + E W+ + L +L + +S P +YCDN GA P H R KHI YH IR V G + V +++ +AD
Subjt: IKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADP
Query: FTKPLTAKVFEGHLESLGLRDMP
TKPL+ F+ +G+ +P
Subjt: FTKPLTAKVFEGHLESLGLRDMP
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.3e-68 | 32.09 | Show/hide |
Query: DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
+P T+ +A E + W AM+ E+ +M W++ P KPIGCKW+YK K +DG ++ +KARLVAKGYTQ EG+D+ ETFSPV L S++++L+
Subjt: DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLS
Query: IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLV
I+A +++ + Q+D+ AFLNG+L+E IYM+ P G+ + +C L +SIYGLKQASR W ++F + +GF Q + + +I ++
Subjt: IAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLV
Query: LYVDDILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEM
+YVDDI++ N+ + + F+++DLG ++ LG++I R + + Q Y ++ + + K +P VT S + D +
Subjt: LYVDDILLIGND----------IATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEM
Query: RHIPYASAVGSLMYAMLCTRPDICY----------------------------------------ADLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
+ Y +G LMY + TR DI + A++ L ++D+ FQ+ +D+R+ST+G L +
Subjt: RHIPYASAVGSLMYAMLCTRPDICY----------------------------------------ADLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAV
Query: VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE
W+S KQ ++ S+ EAEY A A E +WL F +L++ +SKP L+CDN+ A+ + H+R KHIE H +RE
Subjt: VWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 9.6e-07 | 40.62 | Show/hide |
Query: HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV
H++ +E LVK G L + +SL CE C+ GK + F+ H K PL+ VHSDL G +V
Subjt: HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNV
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 4.3e-07 | 35.37 | Show/hide |
Query: NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK
NRT+++ VRSM+ LP +F A TAV+I+N PS +++ P ++W + + R +GC A++ + KL+PR+K
Subjt: NRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.1e-16 | 44.19 | Show/hide |
Query: WIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIA
W +AM EL+++ N W LV P +GCKW++K K +DG + KARLVAKG+ Q EG+ + ET+SPV +IR +L++A
Subjt: WIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIA
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