CuGenDBv2

Gene ID	Pay0008165
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Double-stranded RNA-binding protein 2-like
Genome location	chr12:3502518..3503206
RNA-Seq Expression	Pay0008165
Synteny	Pay0008165
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]

2.1e-59

90.98

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR +PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGALL +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]

3.9e-66

98.53

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRR RPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGAL+LMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA

XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]

2.1e-59

90.98

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR +PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGALL +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]

1.5e-44

75.19

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]

6.1e-43

73.68

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISEC+++ CI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLL CVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXY3 Uncharacterized protein

1.0e-59

90.98

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR +PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGALL +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

A0A1S3C748 uncharacterized protein LOC103497245

1.9e-66

98.53

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRR RPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGAL+LMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA

A0A5A7SXG3 Uncharacterized protein

1.9e-66

98.53

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRR RPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGAL+LMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGRSRA

A0A6J1HP59 uncharacterized protein LOC111464745

5.0e-43

73.68

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTF REDTVV E+T Q C GK++ RR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLL CVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

A0A6J1I3Q2 uncharacterized protein LOC111469389

7.0e-45

75.19

Show/hide

Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLLMFRRLLCCVAKVDGR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G46310.1 unknown protein

4.6e-04

39.73

Show/hide

Query:  MASVCISECVD--NACIVSAAQPTYVNLQRWSEEE-----KWSTERRRPRPRAAEGISRRQMYLRSYTFSRED
        MAS CI +CV+  N  I      T+  + +W   E       S +    R  A E +S RQMYLRSYTFSR++
Subjt:  MASVCISECVD--NACIVSAAQPTYVNLQRWSEEE-----KWSTERRRPRPRAAEGISRRQMYLRSYTFSRED

AT5G02640.1 unknown protein

4.3e-10

34.78

Show/hide

Query:  MASVCISECVDNA----CIVSAAQPTYVNLQRWSEEE-KWSTERRR----PRPRAAEGISRRQMYLRSYTFSRED-----TVVPETTTQNCFGKIR----
        M SVCIS C+++A      V   + +YVNL +W E + ++    RR    P  R  + IS RQMYLRSYTFSRED       V   T  +C G+++    
Subjt:  MASVCISECVDNA----CIVSAAQPTYVNLQRWSEEE-KWSTERRR----PRPRAAEGISRRQMYLRSYTFSRED-----TVVPETTTQNCFGKIR----

Query:  -RRRHR-----------PARIRGSRRRSRCFAMVKAAATQASSGALLLMFRRLLCCVAKVD
         RR+ +             R RG +RR     + +    + +   +L +FRRLL C A VD
Subjt:  -RRRHR-----------PARIRGSRRRSRCFAMVKAAATQASSGALLLMFRRLLCCVAKVD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTTTCTGCTGCGCAGCCCACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGG
TCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCGGAGGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACACCGTTGTCCCT
GAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCATAGGCCAGCGAGGATTCGCGGCAGCCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAA
GCCGCCGCCACTCAGGCTTCTTCCGGCGCCTTGCTCTTAATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTTGACGGTCGCTCACGAGCGTAA

mRNA sequence

Show/hide mRNA sequence

CTCAATTACACAACAAAAACCCATTTCCCCATTCTCTAAGATCTCTAGAATTCCATCGTTCTCGCCGGAATTTTTTCGCCGGCGATACGTACGATGGCCTCCGTC
TGCATATCCGAATGCGTCGACAACGCCTGCATCGTTTCTGCTGCGCAGCCCACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGGTCTACAGAGCGC
CGCCGTCCAAGGCCGAGAGCGGCGGAGGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACACCGTTGTCCCTGAGACTACAACT
CAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCATAGGCCAGCGAGGATTCGCGGCAGCCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAAGCCGCCGCCACT
CAGGCTTCTTCCGGCGCCTTGCTCTTAATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTTGACGGTCGCTCACGAGCGTAAGTGTTTGTGAATTTTGTGAAA
TCAAAGGTTTCTTTTTTCTCTTCTTTTCCTTTTCTTTTCGTTTTTAATGAAATAGCCAACTATGAAATAAAGGTAAGGAAACATAGAAATCCTCTCCCTCGAGCC
TCGAGGGGCACCATCACCATCTTAGTTGGGATGACAATGGGTCATTTTCACTTTGGCAC

Protein sequence

Show/hide protein sequence

MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRHRPARIRGSRRRSRCFAMVK
AAATQASSGALLLMFRRLLCCVAKVDGRSRA

Pay0008165 (gene) of Melon (Payzawat) v1 genome