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Pay0008308 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0008308
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:2727209..2727526
RNA-Seq ExpressionPay0008308
SyntenyPay0008308
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067736.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]3.9e-53100Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

KAG6583431.1 RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2155.24Show/hide
Query:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        +L A+ +AE +RQ+Q+         T  EE +S V  VAYK +K  E   S  CCAICIE F++EEICGV++ CGHCFH+ C+DQWL IESRCPLCRCLV
Subjt:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Query:  HAVSQ
          VS+
Subjt:  HAVSQ

TYJ97407.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]1.9e-5299.05Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

XP_016902103.1 PREDICTED: RING-H2 finger protein ATL52-like [Cucumis melo]1.9e-5299.05Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

XP_023520574.1 RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]3.9e-2154.29Show/hide
Query:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        +L A+ +AE++R++ +  TT     T  EE +S V  VAYK +K  E   S  CCAICIE FE++EICGV++ CGHCFH+ C+DQWL I+SRCPLCRCLV
Subjt:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Query:  HAVSQ
          VS+
Subjt:  HAVSQ

TrEMBL top hitse value%identityAlignment
A0A1S4E1K2 RING-type E3 ubiquitin transferase9.3e-5399.05Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

A0A5A7VMH1 RING-H2 finger protein ATL52-like1.9e-53100Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

A0A5D3BE50 RING-type E3 ubiquitin transferase9.3e-5399.05Show/hide
Query:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
        MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVM VAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA
Subjt:  MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHA

Query:  VSQQY
        VSQQY
Subjt:  VSQQY

A0A6J1HJU0 RING-type E3 ubiquitin transferase6.7e-1951.43Show/hide
Query:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        +L A+ +AE ++Q+Q+         T  EE +S V  VAY+ +K  E       CAICIE FE+EEICGV++ CGHCFH+ C+DQWLRI SRCPLCRCL+
Subjt:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Query:  HAVSQ
          VS+
Subjt:  HAVSQ

A0A6J1I5C3 RING-type E3 ubiquitin transferase1.3e-1952.38Show/hide
Query:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        +L A+ +AE++RQ+Q+         T  EE +S V  VAY+ +K  +   S  CCAICIE FE+EEICGVV+ C HCFH+ C+D+WL I SRCPLCRCLV
Subjt:  QLLAQTQAEIIRQRQT--TTQSNDTTEGEETSSAVMTVAYK-VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Query:  HAVSQ
          VS+
Subjt:  HAVSQ

SwissProt top hitse value%identityAlignment
O22255 RING-H2 finger protein ATL641.3e-0850Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Q8W571 RING-H2 finger protein ATL323.0e-0840.62Show/hide
Query:  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQ
        VK+++ G     CAIC+ E ED E   ++  C H FH DC+D WL   + CP+CR  + A S +
Subjt:  VKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQ

Q9C7I1 RING-H2 finger protein ATL342.3e-0846.43Show/hide
Query:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Subjt:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR

Q9LSW9 RING-H2 finger protein ATL161.3e-0847.83Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Q9LZJ6 RING-H2 finger protein ATL57.9e-0945Show/hide
Query:  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        Y VK +E+      C++C+ EFE+++   V+  CGH FH DC+D W R  S CPLCR  V
Subjt:  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

Arabidopsis top hitse value%identityAlignment
AT1G35330.1 RING/U-box superfamily protein1.6e-0946.43Show/hide
Query:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        +VK  + G     CAIC+ EFEDEE   ++  C H FH  C+D WL   S CP+CR
Subjt:  KVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR

AT2G47560.1 RING/U-box superfamily protein9.6e-1050Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EFE+E+   ++  CGH FH DC+D W R  S CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

AT3G62690.1 AtL55.6e-1045Show/hide
Query:  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        Y VK +E+      C++C+ EFE+++   V+  CGH FH DC+D W R  S CPLCR  V
Subjt:  YKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

AT5G43420.1 RING/U-box superfamily protein9.6e-1047.83Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV
        C++C+ EF+DEE   ++ +C H FH DC+D WL+  + CPLCR  V
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLV

AT5G53110.1 RING/U-box superfamily protein1.9e-1048.84Show/hide
Query:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR
        CAIC+ E+E +E    +  C HCFH DC+D+WL++   CP+CR
Subjt:  CAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATG
ACGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAG
AGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATAT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCCTTGCTCAAACTCAAGCCGAAATCATAAGGCAACGGCAGACTACGACGCAATCGAATGACACCACGGAAGGCGAGGAAACTTCTTCTGCTGTCATG
ACGGTCGCTTACAAAGTGAAGGATAATGAAGCCGGCGGGTCGTACTGTTGTTGTGCCATATGCATTGAAGAGTTTGAGGATGAAGAGATTTGTGGAGTTGTTGAG
AGTTGTGGCCATTGTTTTCATGAGGATTGTATGGATCAGTGGCTTAGGATTGAGAGCCGTTGCCCATTATGTCGTTGTTTGGTTCATGCTGTATCTCAACAATAT
TAG
Protein sequenceShow/hide protein sequence
MQLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCCCAICIEEFEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQQY