; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0008330 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0008330
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr09:8065938..8067519
RNA-Seq ExpressionPay0008330
SyntenyPay0008330
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR044961 - Tetratricopeptide repeat protein POLLENLESS 3/SULFUR DEFICIENCY-INDUCED 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040522.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.1e-4575.36Show/hide
Query:  MLRPPVTEDVAFVRRYNRFVRCRSQ-------------------------LISKSVQQVILDAKVGPPSYENGLAKDIIYVDDVLEIRDMMTKHRVLKIP
        MLRPPVTEDVAFVRRYNRFVRCRSQ                         LISKSVQQVILDAKVGPPSYENGLAKDII +DDVLEIRDMMTKHRVLKIP
Subjt:  MLRPPVTEDVAFVRRYNRFVRCRSQ-------------------------LISKSVQQVILDAKVGPPSYENGLAKDIIYVDDVLEIRDMMTKHRVLKIP

Query:  DCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DCSMIEANGVIQEFLASDKTHP+MDAIED+  V+ A+K
Subjt:  DCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

KAA0060727.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.3e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDVLEIR MMTKHRVLKIP CSMIEANGVI EFLA DKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

XP_008457061.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X2 [Cucumis melo]5.6e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDV+EIRDMMTK RVLKIP CSMIEANGVI EFLASDKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

XP_016902057.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X1 [Cucumis melo]5.6e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDV+EIRDMMTK RVLKIP CSMIEANGVI EFLASDKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

XP_016902068.1 PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis melo]3.3e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDVLEIR MMTKHRVLKIP CSMIEANGVI EFLA DKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

TrEMBL top hitse value%identityAlignment
A0A1S3C4Q7 pentatricopeptide repeat-containing protein At4g21065-like isoform X22.7e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDV+EIRDMMTK RVLKIP CSMIEANGVI EFLASDKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

A0A1S4E1F6 pentatricopeptide repeat-containing protein At4g21065-like isoform X12.7e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDV+EIRDMMTK RVLKIP CSMIEANGVI EFLASDKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

A0A1S4E1G8 pentatricopeptide repeat-containing protein At3g62890-like1.6e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDVLEIR MMTKHRVLKIP CSMIEANGVI EFLA DKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

A0A5D3BTR2 Pentatricopeptide repeat-containing protein1.6e-1582.46Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DDVLEIR MMTKHRVLKIP CSMIEANGVI EFLA DKTHPNMDAIED+  V+ A+K
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

A0A5D3C2N9 Pentatricopeptide repeat-containing protein1.5e-4575.36Show/hide
Query:  MLRPPVTEDVAFVRRYNRFVRCRSQ-------------------------LISKSVQQVILDAKVGPPSYENGLAKDIIYVDDVLEIRDMMTKHRVLKIP
        MLRPPVTEDVAFVRRYNRFVRCRSQ                         LISKSVQQVILDAKVGPPSYENGLAKDII +DDVLEIRDMMTKHRVLKIP
Subjt:  MLRPPVTEDVAFVRRYNRFVRCRSQ-------------------------LISKSVQQVILDAKVGPPSYENGLAKDIIYVDDVLEIRDMMTKHRVLKIP

Query:  DCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK
        DCSMIEANGVIQEFLASDKTHP+MDAIED+  V+ A+K
Subjt:  DCSMIEANGVIQEFLASDKTHPNMDAIEDIDRVDSALK

SwissProt top hitse value%identityAlignment
Q8GXU5 Protein SULFUR DEFICIENCY-INDUCED 12.0e-0788.57Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDMAVVMKQLDRS+EAIEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF

Q9FKV5 Protein POLLENLESS 3-LIKE 13.2e-0577.14Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDM VV+KQL+R DE IEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF

Q9SD20 Protein POLLENLESS 3-LIKE 27.2e-0576.47Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKS
        AI   DRVDSALKDMA+VMKQ +R++EAIEAIKS
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKS

Q9SR82 Putative pentatricopeptide repeat-containing protein At3g088201.9e-0552.17Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAI
        D+  E+RDMM K  + KIP  S IE  G + EFLA DK+HP  D I
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAI

Q9SUC3 Protein POLLENLESS 31.7e-0685.71Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDMAVVMKQL RSDE IEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF

Arabidopsis top hitse value%identityAlignment
AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0652.17Show/hide
Query:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAI
        D+  E+RDMM K  + KIP  S IE  G + EFLA DK+HP  D I
Subjt:  DDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAI

AT3G51280.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.1e-0676.47Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKS
        AI   DRVDSALKDMA+VMKQ +R++EAIEAIKS
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKS

AT4G20900.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-0785.71Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDMAVVMKQL RSDE IEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF

AT5G44330.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-0677.14Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDM VV+KQL+R DE IEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF

AT5G48850.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-0888.57Show/hide
Query:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF
        AI   DRVDSALKDMAVVMKQLDRS+EAIEAIKSF
Subjt:  AIEDIDRVDSALKDMAVVMKQLDRSDEAIEAIKSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGTCCGCCCGTCACTGAAGACGTTGCGTTCGTCCGTCGCTACAACAGGTTTGTTCGCTGTCGTTCACAGTTAATATCAAAATCAGTTCAGCAGGTGATT
CTAGACGCAAAGGTTGGACCACCATCATATGAAAATGGGCTTGCAAAAGATATCATTTATGTTGATGATGTTCTTGAGATTAGGGACATGATGACAAAACATAGG
GTTTTGAAAATTCCTGATTGTAGCATGATTGAAGCAAATGGAGTTATTCAGGAATTTCTAGCTAGTGATAAAACACATCCCAACATGGATGCAATTGAGGATATT
GATCGAGTAGACAGTGCACTGAAAGACATGGCTGTAGTGATGAAGCAGTTGGACCGCTCTGATGAAGCAATTGAGGCTATCAAATCCTTTTCTTTAGACGTTTTC
CTTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCGTCCGCCCGTCACTGAAGACGTTGCGTTCGTCCGTCGCTACAACAGGTTTGTTCGCTGTCGTTCACAGTTAATATCAAAATCAGTTCAGCAGGTGATT
CTAGACGCAAAGGTTGGACCACCATCATATGAAAATGGGCTTGCAAAAGATATCATTTATGTTGATGATGTTCTTGAGATTAGGGACATGATGACAAAACATAGG
GTTTTGAAAATTCCTGATTGTAGCATGATTGAAGCAAATGGAGTTATTCAGGAATTTCTAGCTAGTGATAAAACACATCCCAACATGGATGCAATTGAGGATATT
GATCGAGTAGACAGTGCACTGAAAGACATGGCTGTAGTGATGAAGCAGTTGGACCGCTCTGATGAAGCAATTGAGGCTATCAAATCCTTTTCTTTAGACGTTTTC
CTTTCATAG
Protein sequenceShow/hide protein sequence
MLRPPVTEDVAFVRRYNRFVRCRSQLISKSVQQVILDAKVGPPSYENGLAKDIIYVDDVLEIRDMMTKHRVLKIPDCSMIEANGVIQEFLASDKTHPNMDAIEDI
DRVDSALKDMAVVMKQLDRSDEAIEAIKSFSLDVFLS