CuGenDBv2

Gene ID	Pay0008652
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	LITAF domain-containing protein
Genome location	chr11:31514906..31517855
RNA-Seq Expression	Pay0008652
Synteny	Pay0008652
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006629 - LPS-induced tumour necrosis factor alpha factor IPR037519 - LITAF domain containing protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039847.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa]

4.9e-77

99.25

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_004140553.1 GSH-induced LITAF domain protein [Cucumis sativus]

9.2e-76

97.76

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDP GVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_008459901.1 PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]

5.8e-78

100

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

XP_022954275.1 GSH-induced LITAF domain protein [Cucurbita moschata]

1.9e-68

90.23

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

XP_022991744.1 GSH-induced LITAF domain protein [Cucurbita maxima]

1.1e-68

90.23

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDG7 LITAF domain-containing protein

4.5e-76

97.76

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDP GVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKIS AAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A1S3CCH3 uncharacterized protein LOC103498881

2.8e-78

100

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A5D3DMB0 Zf-LITAF-like domain-containing protein

2.4e-77

99.25

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKNHEPVVGVPLYVGNNPYQAGQIPPN IFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
        CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALPG

A0A6J1GS01 GSH-induced LITAF domain protein

9.0e-69

90.23

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

A0A6J1JVN9 GSH-induced LITAF domain protein

5.3e-69

90.23

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        MSKN EPVVG+P YVGNN YQAGQIPPN IFG PQGVPI QTMYRDTPAP+ CVYCGNSGLT+IRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CPSCKEKVGDFEK D CAVMDPPHWTQPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

SwissProt top hits

e value

%identity

Alignment

Q94CD4 GSH-induced LITAF domain protein

5.8e-57

71.43

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Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPN I+GDP G PIQQT+YRDTPAPFNC+YCGN+GLT +RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

Arabidopsis top hits

e value

%identity

Alignment

AT5G13190.1 CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

4.1e-58

71.43

Show/hide

Query:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY
        M+K    V+GVP Y G NPYQAG +PPN I+GDP G PIQQT+YRDTPAPFNC+YCGN+GLT +RSK  +AAVV CMMPFMLG CFLCPSMDCLW+K H+
Subjt:  MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHY

Query:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP
        CP C  KV DFEK D C VMDPP W QPS+ALP
Subjt:  CPSCKEKVGDFEKLDRCAVMDPPHWTQPSYALP

Sequences

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CDS sequence

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ATGTCCAAGAACCACGAGCCGGTCGTCGGAGTTCCACTCTATGTCGGCAACAACCCCTATCAGGCCGGCCAGATCCCTCCCAACCCCATTTTTGGCGATCCCCAGGGGGT
TCCTATTCAACAAACCATGTACCGCGACACTCCTGCTCCTTTCAACTGTGTCTATTGTGGAAATTCCGGCCTCACCACCATCAGGTCAAAGATAAGTTTAGCTGCTGTCG
TTGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTATCACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGAT
TTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTACGCATTGCCTGGTTGA

mRNA sequence

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ATTTTATCGAATTAAACTTTTACTTTGAGATTAAATTTACAATTTAATCAAAATTTTAAATGTAAATTATATTCATTATCAACTAATTAGAGTAAGAATGGGTTTATAAT
TTATAAATATACAATATCAAACACAATTAAACATTAGAATTCAAATTTGTAGCCTTAAATATATATACAAAAGGGCGTATTTGGGTGTGGGGCCAGTGTTAACCAATGGG
AACTAAGAATATATTTTTCTTTGTAAATAATATATGGGCGAAAGATATGGCGTTTTGACTTCGTAATTATCATTTGAATTCCGTTTTCTATCAATTCCTTCAACACAGAG
AAAAGAGAGCGAGATACGAAGCTTACCCGAGCGAAAATGTCCAAGAACCACGAGCCGGTCGTCGGAGTTCCACTCTATGTCGGCAACAACCCCTATCAGGCCGGCCAGAT
CCCTCCCAACCCCATTTTTGGCGATCCCCAGGGGGTTCCTATTCAACAAACCATGTACCGCGACACTCCTGCTCCTTTCAACTGTGTCTATTGTGGAAATTCCGGCCTCA
CCACCATCAGGTCAAAGATAAGTTTAGCTGCTGTCGTTGGTTGTATGATGCCATTTATGTTGGGTGTATGCTTTCTTTGTCCTTCAATGGACTGCCTTTGGCATAAGTAT
CACTATTGCCCCAGCTGCAAGGAAAAGGTTGGTGATTTTGAGAAATTGGATAGATGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTACGCATTGCCTGGTTG
ATTTTGAGGAGCTGCTATTTTCCCATGTGGTTATTTAGCATCATCTGCATTCAGTACTTGCGATACTCTTGTGCTGTTTTTGTGATGTTCTTGTTACACTTAGGGATAGA
CACAGTTTGGATATCTTTCCATTTATACAATTGTAATAGAACCAAGTACATGTTTTGTTTTTTATATCTTACCGCTTGTAAATACCTTGTTCTTACATTGGCCTTGCTGT
TTATAGACAATTCTGCTAGCCTAATTTGGATCAATCTTTCCATAGACCTCTTGATCTTGATCATTCATCCCACTACTGGAAATGGTATGCATTTATCCAATTCATTACCT
TGAATCATCCATGGGGTTTTCTTTTTCTTCTTGATTTGATTATCGAAAGAAATCCAAAAGCAAAGATGGGTTGCCATGGCCTGCTTGAATTCTGATCAATAATGTTACTA
TCTGGTTCCACACAAGTAAACAATGAAGAAACATTTTGGAAAAGATAATATACCTGACTTCATTGGAGTCTTGGACAGATACAGGGAAAAAGAATTGAAGTCGGATACCG
AGGTTCGCAATGTGGGGAAGCAAAGGTTCGACATGAGAAATAAGAGCCGGTCTTGATAGCCAAAGAGACTGCCTGCATGGATATGACACAACAGGGTTTGATGGCAGGCT
TTTGTAGATAATCCCTTCATGAAGTTGCAATCTGCAGGCAAGTCATCCTTGGCTACAATACATGACTCTCCATTCCCATGTTGAACCTTCCTTCCTCATAAATCAGGTAA
AGAATTAAAGCGTCTTTCTTGTTGTATGTTGAATGAAAAAGTTGTGTCCTTTAAGAACCAAAAAGGGGATTTTATGTATATATGTATGTATGTATGTATGTTTGTATGTG
TGCATTGGAGTTTGGTTTTTTATAAGTTAAAATTATTAGCTGCAGCTCAAGAACAACAATAGACTGCAATCTACACTCATCGAGGTGTTTCTGTCTTCGAATATATTCTG
TATAATTGGAGTTGTAAAATTTTC

Protein sequence

Show/hide protein sequence

MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSGLTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGD
FEKLDRCAVMDPPHWTQPSYALPG

Pay0008652 (gene) of Melon (Payzawat) v1 genome