CuGenDBv2

Gene ID	Pay0008935
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	chr07:2734731..2735033
RNA-Seq Expression	Pay0008935
Synteny	Pay0008935
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR018271 - Ribosomal protein S14, conserved site IPR043140 - Ribosomal protein S14/S29

Homology

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GenBank top hits

e value

%identity

Alignment

QVX29326.1 ribosomal protein S14 [Diplotropis ferruginea]

1.7e-32

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKSHLIRRSLK+EISKVP                  SAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

QZL38591.1 ribosomal protein S14 [Citrullus naudinianus]

1.7e-32

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLK+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_004841781.1 ribosomal protein S14 [Cucumis melo subsp. melo]

5.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009752918.1 ribosomal protein S14 [Momordica sessilifolia]

1.7e-32

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLK+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009753872.1 ribosomal protein S14 [Trichosanthes lobata]

1.7e-32

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLK+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU02 30S ribosomal protein S14, chloroplastic

2.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A249RY26 30S ribosomal protein S14, chloroplastic

2.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A249RZ23 30S ribosomal protein S14, chloroplastic

2.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A249RZC3 30S ribosomal protein S14, chloroplastic

2.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A286NG28 30S ribosomal protein S14, chloroplastic

2.9e-33

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRSLKQEISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

SwissProt top hits

e value

%identity

Alignment

Q2MII9 30S ribosomal protein S14, chloroplastic

5.5e-34

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK H IRRS K+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q33C38 30S ribosomal protein S14, chloroplastic

5.5e-34

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK H IRRS K+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q3C1I0 30S ribosomal protein S14, chloroplastic

5.5e-34

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK H IRRS K+EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q49L00 30S ribosomal protein S14, chloroplastic

5.5e-34

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIRRS K+EISKVP                  SAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q4VZN5 30S ribosomal protein S14, chloroplastic

8.5e-35

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQK HLIR+SLK EISKVP                  SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Arabidopsis top hits

e value

%identity

Alignment

ATCG00330.1 chloroplast ribosomal protein S14

1.4e-32

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Query:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MA+KSLI REKKRQKLE+K HLIRRS K+EISK+P                  SAPTRLHRRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVP------------------SAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sequences

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CDS sequence

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ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATCTCATTTGATTCGTCGATCCTTAAAACAAGAAATAAGCAAAGTTCCA
TCTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTCTCTGGACACATACTTCGTGAAATGGTTCAT
GCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

mRNA sequence

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Protein sequence

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MARKSLIQREKKRQKLEQKSHLIRRSLKQEISKVPSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Pay0008935 (gene) of Melon (Payzawat) v1 genome