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Pay0009062 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009062
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionProtein indeterminate-domain 16
Genome locationchr02:24112913..24114251
RNA-Seq ExpressionPay0009062
SyntenyPay0009062
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]4.0e-84100Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

KAE8652381.1 hypothetical protein Csa_014379 [Cucumis sativus]2.2e-7495.88Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
        RLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Subjt:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]2.1e-7796Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]9.0e-8499.42Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]3.1e-7694.15Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSD FEA   GSVDLQLSISLRPIRP     ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein1.0e-7796Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAA+EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A1S3CN02 protein indeterminate-domain 164.3e-8499.42Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5A7UWD1 Protein indeterminate-domain 162.0e-84100Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5D3BFD1 Protein indeterminate-domain 164.3e-8499.42Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  IEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like3.2e-7189.02Show/hide
Query:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRL
        MEDEDQKELQLLPTPH+IA  SSSSHMSSRPS SS+RFRSDP+EAG  GS+DLQLSIS+RPIRP     EC+FKYEEVMKPEAASCVEALKWQAAEQIRL
Subjt:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRL

Query:  AAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AA+EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  AAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 52.2e-0841.77Show/hide
Query:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9C9X7 Protein indeterminate-domain 141.6e-0644.44Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9FRH4 Protein indeterminate-domain 167.1e-0734.03Show/hide
Query:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELAQTEFA
        RPS+      + PF A S    S++LQLSI +          E   K E  +  E A+  EA K                AE  R+  KR+IE+A+ +F 
Subjt:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELAQTEFA

Query:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +A+++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 165.0e-0834.03Show/hide
Query:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELAQTEFA
        RPS+      + PF A S    S++LQLSI +          E   K E  +  E A+  EA K                AE  R+  KR+IE+A+ +F 
Subjt:  RPSDSSLRFRSDPFEAGSG--GSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKREIELAQTEFA

Query:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +A+++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.1 C2H2-like zinc finger protein1.6e-0941.77Show/hide
Query:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.2 C2H2-like zinc finger protein1.6e-0941.77Show/hide
Query:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.3 C2H2-like zinc finger protein1.6e-0941.77Show/hide
Query:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)4.5e-3353.8Show/hide
Query:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLA
        + +  KELQLLP+P S  + S     RP+  +    ++   + S     +DL+LSISL  I             EE+  P     VEALKWQAAEQIRLA
Subjt:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLA

Query:  AIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
        AIEKAYAERVRELT+RE+E+AQ+EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFRP
Subjt:  AIEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCG
TTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACG
AGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATAGAAAAGGCGTATGCTGAGAGAGTTAGA
GAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAG
AGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATTCAGAGTCTGTTTCCATTGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAAAAAAGAGAAGAGAAAAAGAAAGAAAGAAAAAAAAAAAAAAAAGGAAAACCA
ATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCC
GTCCATCCGACTCCTCGTTACGGTTCCGTTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACG
GCAGGGGGGGAGTGCTTGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGAT
AGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAG
TTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTA
TCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTCCTTTTAATTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTTCTTTTTA
ATTAATCATTTAAATTAAGTAAACTAAAGAAACAAAAAAATATATGGGGTTCTTAATTAGTTGGATCATTACCATCTTTGATCATCAACAATTACACATTAAATAATTCA
AAATTGGAGTTCAAATTCAATTTTGTTTTGGAAATTTGTTTTGGTCTCCTAGTAATTTAATTTCTTGGTTGTTTAGTGAATTAAGTTTGTATGATATTTTAATATATTAT
TGAATATTATATATGGATGATTTGTTTATGACATTTTTATTTTTCAAGCAGTGATAGTGTGAAGATCATCTTGTATATATATTTTATTAGATTGCCTTTTTCCCCCTTTT
TTCTTTTTGCTTTTCTGGAAAATCTCGTTTTTGTTATCACAAATCACACGACTCTGACTGATGTGTTTACAAATAATTGAAGAACTGTTTTTCTCTCTCTCTTCTTTTTA
TGTTATTTTAATTTTCCATTTAATTAAAGAGTATAATCATTCTATTTTGTGTTACACACATTTAATTTATTAGTTTATGCATGTATAAAAAAAGCCATCAATCTTTGAGT
CATAATAGTTATAATTAGC
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVR
ELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS