; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0009174 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009174
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:9730997..9732073
RNA-Seq ExpressionPay0009174
SyntenyPay0009174
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]4.0e-17186.87Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFTPYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DM QNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA DRLDLQR+EKKSS+SFKEYAQ WRDM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EATT+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]6.8e-17186.87Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFTPYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DM QNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY+RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA D LDLQRMEKKSS+SFKEYAQ WRDMAAEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EATT+YG IKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

KAA0044913.1 uncharacterized protein E6C27_scaffold74G002080 [Cucumis melo var. makuwa]2.4e-16886.03Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFTPYHMNV QSQTTQHYVP NPLY VPPIVP IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ WRDM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]1.4e-16885.47Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINN+GEQVSKILELLSM KGKV VDTTQSSNPIQDT+DPIYP  FTPYHMNV QSQTTQHY+P +PLY VPPIVP +EHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENT AKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ W+DM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL E TT+YGGIKKGTISKKKE E+HA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

XP_008465589.1 PREDICTED: uncharacterized protein LOC103503225 [Cucumis melo]2.7e-16785.47Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFTPYHMNV QSQT QHYVP NPLY VPPIVP IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ W+DM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

TrEMBL top hitse value%identityAlignment
A0A1S3CQP2 uncharacterized protein LOC1035032251.3e-16785.47Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFTPYHMNV QSQT QHYVP NPLY VPPIVP IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ W+DM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

A0A5A7T0H8 Uncharacterized protein1.9e-17186.87Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFTPYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DM QNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA DRLDLQR+EKKSS+SFKEYAQ WRDM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EATT+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein3.3e-17186.87Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGK VVDT QSSNPIQDT+DPIYP GFTPYH+NV QSQTTQHYVP NPLY VPPI+P IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DM QNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY+RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA D LDLQRMEKKSS+SFKEYAQ WRDMAAEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EATT+YG IKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

A0A5A7V3W7 Retrotrans_gag domain-containing protein6.8e-16985.47Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINN+GEQVSKILELLSM KGKV VDTTQSSNPIQDT+DPIYP  FTPYHMNV QSQTTQHY+P +PLY VPPIVP +EHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENT AKQKLDVLE+RLRAIE TDVYGNIDATQLCLVPGLIIPAKFKV EFDKYDGSTCPRSHLIMY RKMA HINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIHVWKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ W+DM AEVQP LTDKEMTSMFMNTLRA FYERMIGNAST FSDI V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL E TT+YGGIKKGTISKKKE E+HA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

A0A5D3CXD6 Retrotrans_gag domain-containing protein1.2e-16886.03Show/hide
Query:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI
        MEE+D+D+DKMRQEINNLGEQVSKILELLSM KGKV VDT QSSNPIQDT+D IYP GFTPYHMNV QSQTTQHYVP NPLY VPPIVP IEHLEAQAKI
Subjt:  MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKI

Query:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----
        +DMGQNENTPAKQKLDVLE+RLRAIE TDVYGNIDATQLCLVP LIIPAKFKV EFDKYDGSTCPRSHLIMY RKMAAHINN+KLLVHCFQDSLT     
Subjt:  EDMGQNENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLT-----

Query:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV
             D+AHIH+WKDLADAFLKQYKHNIDMA +RLDLQRMEKKSS+SFKEYAQ WRDM  EVQP L DKEMTSMFMNTLRA FYERMIGNAST FS+I V
Subjt:  -----DSAHIHVWKDLADAFLKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITV

Query:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE
        IGERIEY IKHGRL EA T+YGGIKKGTISKKKE EVHA GFPNSGKHKSIFGQRKYE
Subjt:  IGERIEYRIKHGRLVEATTKYGGIKKGTISKKKEREVHANGFPNSGKHKSIFGQRKYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAAGATGAGGACATTGATAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGTGGAAAGGAAAA
GTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAAATGATCCCATTTATCCTCAAGGATTCACTCCATACCACATGAATGTTCTGCAGTCTCAA
ACCACTCAACACTATGTTCCTATGAATCCGCTGTATGCTGTTCCACCCATTGTCCCATGTATAGAACATTTGGAAGCTCAGGCTAAAATTGAAGACATGGGACAA
AACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAAAAAGGTTGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGC
TTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCTTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACCACAGAAAG
ATGGCGGCGCATATTAATAATAATAAATTGCTAGTACATTGCTTCCAGGATAGCTTAACTGATAGTGCACACATTCACGTTTGGAAGGATTTAGCTGATGCATTT
CTAAAGCAATACAAACACAACATTGATATGGCTCAAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGAAAAGCTTCAAAGAATATGCTCAAGGATGG
AGAGATATGGCTGCCGAGGTTCAGCCATCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCTATTCTATGAGCGAATGATTGGTAAT
GCATCAACAATTTTTTCTGATATTACTGTTATTGGCGAAAGAATTGAATATCGAATAAAACACGGAAGGTTAGTAGAGGCTACAACTAAATATGGTGGAATAAAG
AAAGGAACAATATCCAAGAAGAAAGAAAGAGAGGTTCATGCAAATGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAAGATGAGGACATTGATAAAATGAGACAAGAGATTAATAATCTTGGGGAACAAGTTTCAAAAATACTGGAATTGCTTTCAATGTGGAAAGGAAAA
GTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACAAATGATCCCATTTATCCTCAAGGATTCACTCCATACCACATGAATGTTCTGCAGTCTCAA
ACCACTCAACACTATGTTCCTATGAATCCGCTGTATGCTGTTCCACCCATTGTCCCATGTATAGAACATTTGGAAGCTCAGGCTAAAATTGAAGACATGGGACAA
AACGAGAACACTCCGGCTAAGCAAAAGTTAGATGTTTTGGAAAAAAGGTTGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGC
TTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAGTTCTTGAATTCGATAAATATGATGGATCAACGTGTCCAAGGAGTCATCTTATAATGTACCACAGAAAG
ATGGCGGCGCATATTAATAATAATAAATTGCTAGTACATTGCTTCCAGGATAGCTTAACTGATAGTGCACACATTCACGTTTGGAAGGATTTAGCTGATGCATTT
CTAAAGCAATACAAACACAACATTGATATGGCTCAAGACCGTTTAGACTTGCAACGGATGGAGAAGAAGAGTTCGAAAAGCTTCAAAGAATATGCTCAAGGATGG
AGAGATATGGCTGCCGAGGTTCAGCCATCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATACCTTGCGGGCTCTATTCTATGAGCGAATGATTGGTAAT
GCATCAACAATTTTTTCTGATATTACTGTTATTGGCGAAAGAATTGAATATCGAATAAAACACGGAAGGTTAGTAGAGGCTACAACTAAATATGGTGGAATAAAG
AAAGGAACAATATCCAAGAAGAAAGAAAGAGAGGTTCATGCAAATGGTTTTCCTAATTCAGGGAAGCACAAATCAATTTTTGGTCAGAGAAAATATGAGTAA
Protein sequenceShow/hide protein sequence
MEEQDEDIDKMRQEINNLGEQVSKILELLSMWKGKVVVDTTQSSNPIQDTNDPIYPQGFTPYHMNVLQSQTTQHYVPMNPLYAVPPIVPCIEHLEAQAKIEDMGQ
NENTPAKQKLDVLEKRLRAIERTDVYGNIDATQLCLVPGLIIPAKFKVLEFDKYDGSTCPRSHLIMYHRKMAAHINNNKLLVHCFQDSLTDSAHIHVWKDLADAF
LKQYKHNIDMAQDRLDLQRMEKKSSKSFKEYAQGWRDMAAEVQPSLTDKEMTSMFMNTLRALFYERMIGNASTIFSDITVIGERIEYRIKHGRLVEATTKYGGIK
KGTISKKKEREVHANGFPNSGKHKSIFGQRKYE