CuGenDBv2

Gene ID	Pay0009268
Organism	Cucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	chr04:1945162..1947625
RNA-Seq Expression	Pay0009268
Synteny	Pay0009268
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0015031 - protein transport (biological process) GO:0005634 - nucleus (cellular component) GO:0030173 - integral component of Golgi membrane (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608268.1 Bet1-like protein, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-34

92.77

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

KGN60384.2 hypothetical protein Csa_001559 [Cucumis sativus]

1.8e-36

91.21

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLVSRIFCFC
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL+     FC
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLVSRIFCFC

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

4.5e-35

97.59

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

1.8e-36

100

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

3.9e-34

92.77

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

2.2e-35

97.59

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

A0A1S3CQM7 bet1-like protein At1g29060

8.9e-37

100

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

A0A5A7TAQ3 Bet1-like protein

8.9e-37

100

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

A0A6J1FQQ6 bet1-like protein At1g29060

1.9e-34

92.77

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

A0A6J1J0M1 bet1-like protein At1g29060

4.2e-34

91.57

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRP+AASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQL
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

5.4e-23

67.47

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+   GGS +  G A P+RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+L
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

Q8VXX9 Bet1-like protein At4g14600

5.4e-23

68.24

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Query:  MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+  R G+  S Y G AAP+RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+L
Subjt:  MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

3.9e-24

67.47

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Query:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+   GGS +  G A P+RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+L
Subjt:  MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

AT4G14600.1 Target SNARE coiled-coil domain protein

3.9e-24

68.24

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Query:  MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL
        MAS+  R G+  S Y G AAP+RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+L
Subjt:  MASSSFRGGS--SFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL

Sequences

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CDS sequence

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ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCCTTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTGCTTCCGATGAAAT
TCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAA
AGTCTCAGCAAGATTTTCTAGATCAGTTGGTATCACGGATATTTTGTTTTTGCTTTCATTTTTTGACAATCCTTTCTAATTTTTAG

mRNA sequence

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Protein sequence

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MASSSFRGGSSFYNGDAAPFRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLVSRIFCFCFHFLTILSNF

Pay0009268 (gene) of Melon (Payzawat) v1 genome