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Pay0009502 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009502
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionPol protein
Genome locationchr01:9432633..9433492
RNA-Seq ExpressionPay0009502
SyntenyPay0009502
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037486.1 pol protein [Cucumis melo var. makuwa]1.9e-3679.41Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + PVAYRLALPP+F AVHDVF VS+LR+YVAD  HVVD EPLQINENL+YEEQPVEILAREVKML NRGIALVKVLWRNH VE+ATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

KAA0040368.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.3e-3677.45Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + P+AY LALPP+F AVHDVF VSMLRKYVAD  HVVD EPLQIN+NL+YEEQPVEILAREVKMLCNRGI LVKVLWRNH VEEATWE E++M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

KAA0056807.1 pol protein [Cucumis melo var. makuwa]5.0e-3779.41Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + PVAYRLALPP+F AVHDVF VSMLR+YV D  HVVD EPLQINE L+YEEQPVEILAR+VKMLCNRGIALVKVLWRNH VEEATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

TYJ96190.1 pol protein [Cucumis melo var. makuwa]1.0e-3782.18Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   +DPVAYRLALPP+F AVHDVF VS+LRKYVAD MHVVD EPLQINENL+YEEQPVEILAREVKML NRGIALVKVLW+NH VEEATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  K
        +
Subjt:  K

XP_008461967.1 PREDICTED: uncharacterized protein LOC103500445 [Cucumis melo]1.1e-6392.7Show/hide
Query:  MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEIL
        MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPF LR  VDPVAYRLALPPAFFAVHDVF VSMLRKYVADL +VVDLEPLQINENL Y+EQPVEIL
Subjt:  MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEIL

Query:  AREVKMLCNRGIALVKVLWRNHVVEEATWEREEEMKA
        AREVKMLCNRGIALVKVLW NHVVEE TWEREEEMKA
Subjt:  AREVKMLCNRGIALVKVLWRNHVVEEATWEREEEMKA

TrEMBL top hitse value%identityAlignment
A0A1S3CFS6 uncharacterized protein LOC1035004455.2e-6492.7Show/hide
Query:  MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEIL
        MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPF LR  VDPVAYRLALPPAFFAVHDVF VSMLRKYVADL +VVDLEPLQINENL Y+EQPVEIL
Subjt:  MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEIL

Query:  AREVKMLCNRGIALVKVLWRNHVVEEATWEREEEMKA
        AREVKMLCNRGIALVKVLW NHVVEE TWEREEEMKA
Subjt:  AREVKMLCNRGIALVKVLWRNHVVEEATWEREEEMKA

A0A5A7T5R3 Pol protein9.3e-3779.41Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + PVAYRLALPP+F AVHDVF VS+LR+YVAD  HVVD EPLQINENL+YEEQPVEILAREVKML NRGIALVKVLWRNH VE+ATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

A0A5D3B8L4 Pol protein4.9e-3882.18Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   +DPVAYRLALPP+F AVHDVF VS+LRKYVAD MHVVD EPLQINENL+YEEQPVEILAREVKML NRGIALVKVLW+NH VEEATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  K
        +
Subjt:  K

A0A5D3BLR3 Pol protein2.4e-3779.41Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + PVAYRLALPP+F AVHDVF VSMLR+YV D  HVVD EPLQINE L+YEEQPVEILAR+VKMLCNRGIALVKVLWRNH VEEATWEREE+M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

A0A5D3DI78 Ty3-gypsy retrotransposon protein1.6e-3677.45Show/hide
Query:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM
        PF +   + P+AY LALPP+F AVHDVF VSMLRKYVAD  HVVD EPLQIN+NL+YEEQPVEILAREVKMLCNRGI LVKVLWRNH VEEATWE E++M
Subjt:  PFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNRGIALVKVLWRNHVVEEATWEREEEM

Query:  KA
        +A
Subjt:  KA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACCTGTATCTATCATTTCTGACAGAGATGCTCATTTCACATCGAAGTTCTAGAAAGGACTTCAACTTGCCTTGGGCACAAGGTTGGATTTCAGCACAACCTTT
CACCCTCAGATGGATGGTTGACCCAGTAGCTTACCGCTTGGCGTTGCCTCCAGCGTTTTTTGCAGTTCATGATGTATTCCGTGTCTCTATGCTGAGGAAGTATGTCGCAG
ACCTGATGCATGTAGTCGACTTGGAGCCGTTGCAAATTAATGAGAACTTGACGTATGAGGAGCAACCTGTTGAGATTTTGGCAAGAGAGGTTAAGATGCTCTGTAATCGA
GGAATTGCACTAGTCAAAGTTCTTTGGCGGAACCATGTAGTTGAAGAAGCCACTTGGGAGAGAGAAGAGGAAATGAAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTACCTGTATCTATCATTTCTGACAGAGATGCTCATTTCACATCGAAGTTCTAGAAAGGACTTCAACTTGCCTTGGGCACAAGGTTGGATTTCAGCACAACCTTT
CACCCTCAGATGGATGGTTGACCCAGTAGCTTACCGCTTGGCGTTGCCTCCAGCGTTTTTTGCAGTTCATGATGTATTCCGTGTCTCTATGCTGAGGAAGTATGTCGCAG
ACCTGATGCATGTAGTCGACTTGGAGCCGTTGCAAATTAATGAGAACTTGACGTATGAGGAGCAACCTGTTGAGATTTTGGCAAGAGAGGTTAAGATGCTCTGTAATCGA
GGAATTGCACTAGTCAAAGTTCTTTGGCGGAACCATGTAGTTGAAGAAGCCACTTGGGAGAGAGAAGAGGAAATGAAAGCCTAG
Protein sequenceShow/hide protein sequence
MEYLYLSFLTEMLISHRSSRKDFNLPWAQGWISAQPFTLRWMVDPVAYRLALPPAFFAVHDVFRVSMLRKYVADLMHVVDLEPLQINENLTYEEQPVEILAREVKMLCNR
GIALVKVLWRNHVVEEATWEREEEMKA