; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0009507 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009507
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr09:11359414..11360641
RNA-Seq ExpressionPay0009507
SyntenyPay0009507
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047513.1 hypothetical protein E6C27_scaffold498G001420 [Cucumis melo var. makuwa]1.5e-6293.48Show/hide
Query:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
        MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
Subjt:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII

Query:  QLFSAFNEADAI---------TFSVPPFAETPLTEEIS
        QLFSAFNEADAI         TFSVPPFAETPLTEEIS
Subjt:  QLFSAFNEADAI---------TFSVPPFAETPLTEEIS

KAE8652085.1 hypothetical protein Csa_018729, partial [Cucumis sativus]9.0e-2070.51Show/hide
Query:  PSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQLFSAFNEADAI---------TFSVPPFAETPLTEE
        PSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DIIQLFS+F EA+ I         +FS+ PFAETPLTEE
Subjt:  PSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQLFSAFNEADAI---------TFSVPPFAETPLTEE

KGN45637.1 hypothetical protein Csa_005027 [Cucumis sativus]7.9e-2455.56Show/hide
Query:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQL
        +P+PLFAEY V R+HI  VSL  LH AL  G+T+++L I ++EEQN I L FE S  S +P+ R++ F VPMEDWS G + FD K FSIES+LF DII  
Subjt:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQL

Query:  FSAFNEAD
        F  +NE D
Subjt:  FSAFNEAD

TYK26483.1 hypothetical protein E5676_scaffold313G00490 [Cucumis melo var. makuwa]1.2e-6193.38Show/hide
Query:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
        MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
Subjt:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII

Query:  QLFSAFNEADAI---------TFSVPPFAETPLTEE
        QLFSAFNEADAI         TFSVPPFAETPLTEE
Subjt:  QLFSAFNEADAI---------TFSVPPFAETPLTEE

XP_031736681.1 uncharacterized protein LOC116402062 [Cucumis sativus]2.2e-4268.38Show/hide
Query:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
        MS+PQPLF EYSVDRNHIS +SL   ++AL++ +TFA LNI ++E+QNKI LTFE SSPSTLPLNRELTFVVPMEDWS   V FDGK+FSIES+LF DII
Subjt:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII

Query:  QLFSAFNEADAI---------TFSVPPFAETPLTEE
        QLFS+F EA+ I         +FS+ PFAETPLTEE
Subjt:  QLFSAFNEADAI---------TFSVPPFAETPLTEE

TrEMBL top hitse value%identityAlignment
A0A0A0KB76 Uncharacterized protein3.8e-2455.56Show/hide
Query:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQL
        +P+PLFAEY V R+HI  VSL  LH AL  G+T+++L I ++EEQN I L FE S  S +P+ R++ F VPMEDWS G + FD K FSIES+LF DII  
Subjt:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQL

Query:  FSAFNEAD
        F  +NE D
Subjt:  FSAFNEAD

A0A0A0LIE0 Uncharacterized protein8.5e-0848.05Show/hide
Query:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNR--ELTF-VVPMED
        MP PLF EYSVDRNHIS +SL    NAL++G+++++++I + E QN I   FE   PS L  +R  ++TF  VP E+
Subjt:  MPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNR--ELTF-VVPMED

A0A5A7TVD7 Uncharacterized protein7.1e-6393.48Show/hide
Query:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
        MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
Subjt:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII

Query:  QLFSAFNEADAI---------TFSVPPFAETPLTEEIS
        QLFSAFNEADAI         TFSVPPFAETPLTEEIS
Subjt:  QLFSAFNEADAI---------TFSVPPFAETPLTEEIS

A0A5D3DSC2 Uncharacterized protein6.0e-6293.38Show/hide
Query:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
        MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII
Subjt:  MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDII

Query:  QLFSAFNEADAI---------TFSVPPFAETPLTEE
        QLFSAFNEADAI         TFSVPPFAETPLTEE
Subjt:  QLFSAFNEADAI---------TFSVPPFAETPLTEE

A0A6J1KZ05 uncharacterized protein LOC1114988871.6e-0638.38Show/hide
Query:  FAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQLFSAF
        FA YSVDRNH S VSL   ++A+ DG  F+++ I   E  +++ L FE+S+ + L ++R L  + P ++   G ++ D + FSI S+ F DII    +F
Subjt:  FAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQLFSAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATGCCGCAACCGTTATTCGCCGAGTATTCCGTTGATCGGAATCACATTTCAATTGTTTCCCTTCCGCCCTTGCACAATGCTTTGGTTGATGGCGAAACT
TTTGCTACACTGAACATCTCTATTGAGGAAGAGCAGAATAAAATATTTCTTACATTTGAGGCTTCAAGTCCTTCAACATTACCATTGAATCGTGAATTGACATTC
GTCGTGCCTATGGAAGATTGGTCTCCTGGACCAGTTAAATTTGATGGAAAAATTTTCTCTATTGAGTCAGAACTGTTTACCGATATTATCCAACTATTTTCTGCC
TTCAATGAAGCTGATGCAATCACCTTCTCAGTTCCTCCATTTGCAGAGACACCTCTTACCGAAGAGATAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATGCCGCAACCGTTATTCGCCGAGTATTCCGTTGATCGGAATCACATTTCAATTGTTTCCCTTCCGCCCTTGCACAATGCTTTGGTTGATGGCGAAACT
TTTGCTACACTGAACATCTCTATTGAGGAAGAGCAGAATAAAATATTTCTTACATTTGAGGCTTCAAGTCCTTCAACATTACCATTGAATCGTGAATTGACATTC
GTCGTGCCTATGGAAGATTGGTCTCCTGGACCAGTTAAATTTGATGGAAAAATTTTCTCTATTGAGTCAGAACTGTTTACCGATATTATCCAACTATTTTCTGCC
TTCAATGAAGCTGATGCAATCACCTTCTCAGTTCCTCCATTTGCAGAGACACCTCTTACCGAAGAGATAAGCTGA
Protein sequenceShow/hide protein sequence
MSMPQPLFAEYSVDRNHISIVSLPPLHNALVDGETFATLNISIEEEQNKIFLTFEASSPSTLPLNRELTFVVPMEDWSPGPVKFDGKIFSIESELFTDIIQLFSA
FNEADAITFSVPPFAETPLTEEIS