; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Pay0009610 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009610
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionrRNA-processing protein FCF1 homolog
Genome locationchr04:28580298..28585422
RNA-Seq ExpressionPay0009610
SyntenyPay0009610
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR002716 - PIN domain
IPR006984 - rRNA-processing protein Fcf1/Utp23
IPR029060 - PIN-like domain superfamily
IPR037503 - rRNA-processing protein Fcf1, PIN domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25530.1 rRNA-processing protein FCF1-like protein [Cucumis melo var. makuwa]2.1e-108100Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG

XP_004136642.1 rRNA-processing protein FCF1 homolog [Cucumis sativus]1.1e-10998.48Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYK+EVLNPKRKDLTKENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

XP_008443271.1 PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo]1.7e-11099.49Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKK+VTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

XP_022158778.1 rRNA-processing protein FCF1 homolog [Momordica charantia]2.5e-10997.98Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKKGPKFAVMKKMVTSKAIKNYKQEVLNPK+KDLTKENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

XP_038903189.1 rRNA-processing protein FCF1 homolog [Benincasa hispida]1.9e-10998.48Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYK++VLNPKRKDLTKENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

TrEMBL top hitse value%identityAlignment
A0A0A0LEW8 PINc domain-containing protein5.3e-11098.48Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYK+EVLNPKRKDLTKENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

A0A1S3B8E3 rRNA-processing protein FCF1 homolog8.2e-11199.49Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKK+VTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

A0A5D3DQI4 rRNA-processing protein FCF1-like protein1.0e-108100Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGG

A0A6J1DX25 rRNA-processing protein FCF1 homolog1.2e-10997.98Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKKGPKFAVMKKMVTSKAIKNYKQEVLNPK+KDLTKENLPRNVPNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRHQYSIERLPEATIGGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

A0A6J1J3K9 rRNA-processing protein FCF1 homolog1.3e-10896.46Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGRAKKGPKFAV+KKM++SKAIKNYK+EVLNPKRKDLTKENLPRN+PNVPSALFFK+NTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM
        TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEAT+GGAPRM
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM

SwissProt top hitse value%identityAlignment
Q05498 rRNA-processing protein FCF12.1e-6361.38Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KF ++K+ + +K  +  K+   N K K+     L RN+P V SALFF++N A+ PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P I
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE
        TDCVMAELE+LG KYR+AL++A+DPR +RL C+HKGTYADDCLV RV QHKCYIVAT D  LK+RIRKIPG+P+M +  H Y IE+LP+
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPE

Q32PD0 rRNA-processing protein FCF1 homolog1.8e-7569.35Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF++NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
        CITDCVMAE+E+LGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+    GAPR
Subjt:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

Q5RFQ0 rRNA-processing protein FCF1 homolog1.8e-7569.35Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF++NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
        CITDCVMAE+E+LGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+    GAPR
Subjt:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

Q9CTH6 rRNA-processing protein FCF1 homolog2.0e-7467.84Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF++NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
        CITDCVMAE+E+LGQK+RVALRIAKDPRF+RLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMY++ H+Y+IER+P+    GAPR
Subjt:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

Q9Y324 rRNA-processing protein FCF1 homolog1.8e-7569.35Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP
        MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF++NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC P
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENL--PRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTP

Query:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
        CITDCVMAE+E+LGQKYRVALRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRKIPGVPIMYI+ H+Y+IER+P+    GAPR
Subjt:  CITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

Arabidopsis top hitse value%identityAlignment
AT1G26530.1 PIN domain-like family protein9.7e-7269.04Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MGR KK  KFAVMK M++ KA+K+YK+EVLNP +KDLT+  LPRNVP+VPS LFF HN++L PPYRVLVDTNFINFSIQNK+DLEKGM            
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
            M  + ++   Y     IAKDPRFERLPC  KGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T+ +YSIE+LPEATIGGAPR
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

AT2G34570.1 PIN domain-like family protein1.3e-0726.17Show/hide
Query:  RNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKL-DLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALRIAKDPRFERLPCTH-KGTYADD
        R   N  +  FF        PY+VL D  F++  + N++   +  + + L        T CV+AELE+LG+ +  +L  A+        C H +   AD+
Subjt:  RNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKL-DLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALRIAKDPRFERLPCTH-KGTYADD

Query:  CLVERV----TQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIER
        CL E +    T+H  + + T D + +R++++   VP+++  R+   I++
Subjt:  CLVERV----TQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIER

AT2G46230.1 PIN domain-like family protein6.9e-9481.22Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KFAV+KKM++ KA+K+YK+EVLNP +KDLT+  LPRNVP+VP+ LFF +N+ L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR
        TDCVMAELE+LGQKYRVALRIAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKIPGVPIMY+T  +YSIE+LPEAT+GGAPR
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPR

AT2G46230.2 PIN domain-like family protein1.1e-7881.07Show/hide
Query:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI
        MG+AKK  KFAV+KKM++ KA+K+YK+EVLNP +KDLT+  LPRNVP+VP+ LFF +N+ L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCI
Subjt:  MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCI

Query:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKI
        TDCVMAELE+LGQKYRVALRIAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+
Subjt:  TDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGGCCAAGAAAGGACCCAAGTTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCCATTAAAAACTACAAGCAAGAGGTCTTGAATCCAAAAAGAAAAGATCT
TACGAAAGAAAACCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGCACAACACTGCATTGGGGCCACCTTATCGGGTCTTGGTGGATACAAATTTCA
TCAATTTCTCCATTCAAAACAAATTGGACTTGGAGAAGGGAATGATGGACTGTCTATATGCTAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGA
TTAGGTCAGAAGTATCGTGTTGCTCTTAGAATAGCTAAGGACCCACGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGACGATTGCCTTGTTGAAAGGGT
GACTCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGCGTACCCATCATGTATATAACTCGACATCAGTATTCGA
TTGAGCGGTTGCCTGAGGCAACAATTGGAGGAGCTCCAAGGATGTAA
mRNA sequenceShow/hide mRNA sequence
ACCCTAACTCATTCATGTCCTCTCTCTTCATTGCTTTCACCACCGTCCTTCTTCTTCTTCTTCACTCCGTCTCTTCCTCCCTTTCAGCAGCACATTGTCGCCGCCCCCTC
TCTCCCGTTCAGTGCTACTGCCGCCGTTTCCGTTGCCGTCTTTTCTCTGCTCGTGTCGTCCCAGCCTCTCTCGAACAGCAGATAGTGAGCAAGTCCTCTTCTAAGCTTTA
AAGCATTGAAATTGCACCCGAGTAAGCGAGAGAATTTAGACAGCCATTTGGTGGCACAACTTCAATTTTTTTTCTTTCAATCAACGAGATGGGGAGGGCCAAGAAAGGAC
CCAAGTTTGCAGTCATGAAGAAGATGGTCACCTCTAAAGCCATTAAAAACTACAAGCAAGAGGTCTTGAATCCAAAAAGAAAAGATCTTACGAAAGAAAACCTCCCAAGA
AATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGCACAACACTGCATTGGGGCCACCTTATCGGGTCTTGGTGGATACAAATTTCATCAATTTCTCCATTCAAAACAA
ATTGGACTTGGAGAAGGGAATGATGGACTGTCTATATGCTAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGTGTTG
CTCTTAGAATAGCTAAGGACCCACGATTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGACGATTGCCTTGTTGAAAGGGTGACTCAGCATAAGTGTTATATC
GTTGCTACTTGTGATAGAGATTTGAAGCGTAGGATTCGCAAGATTCCTGGCGTACCCATCATGTATATAACTCGACATCAGTATTCGATTGAGCGGTTGCCTGAGGCAAC
AATTGGAGGAGCTCCAAGGATGTAATTGTGGGACTTCACAGTGATCGACAAAAAAAATTCAAAATTCTTGAAGAGGTTTTTCCCCTGACCTCCAACCACTTTCCCAAAGA
AAATTAATAAAAGAAATATTGTATGACCTTGTATCATGTAATTTCTTTTGGTTTTAGATTTTTTTTGTTGTCCCTCATTTCTACAATTATTTGATTTTCTTTTTACGTCT
AGTTTATGTACCCTCTAAAGAAGAAAAAAAAATGCTTCTCCCTACTTCTGGGTTGTTGAGA
Protein sequenceShow/hide protein sequence
MGRAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELER
LGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRHQYSIERLPEATIGGAPRM