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Pay0009753 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0009753
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionCondensin complex subunit 1
Genome locationchr01:3446395..3449330
RNA-Seq ExpressionPay0009753
SyntenyPay0009753
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0007076 - mitotic chromosome condensation (biological process)
GO:0010032 - meiotic chromosome condensation (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0051301 - cell division (biological process)
GO:0000779 - condensed chromosome, centromeric region (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0042393 - histone binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044892.1 putative inactive ATP-dependent zinc metalloprotease FTSHI 1 [Cucumis melo var. makuwa]2.9e-0788.24Show/hide
Query:  VGSRYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT
        +GSRYL NPEVLDKVGIK PHGVLSKGPPG GKT
Subjt:  VGSRYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT
TYK25536.1 condensin complex subunit 1 [Cucumis melo var. makuwa]4.7e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
XP_004136646.1 condensin complex subunit 1 [Cucumis sativus]4.7e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
XP_008443280.1 PREDICTED: condensin complex subunit 1 [Cucumis melo]4.7e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
XP_038904683.1 condensin complex subunit 1 [Benincasa hispida]4.4e-0862.3Show/hide
Query:  MACEKLVLIVNCCEFTEPMPDSPPKQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        +A  +LV I +C    +       KQKAKEK VVDGQT HGNG TVANGEKEDGINAEL L
Subjt:  MACEKLVLIVNCCEFTEPMPDSPPKQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
TrEMBL top hitse value%identityAlignment
A0A0A0LHG7 Condensin complex subunit 12.3e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
A0A1S3B7M0 Condensin complex subunit 12.3e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
A0A5A7UFJ3 Condensin complex subunit 12.3e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
A0A5D3DPE6 Condensin complex subunit 12.3e-1097.3Show/hide
Query:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAEL L
Subjt:  KQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
A0A6J1DXI0 Condensin complex subunit 11.4e-0760.66Show/hide
Query:  MACEKLVLIVNCCEFTEPMPDSPPKQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
        +A  +LV I +C    +       KQKAKEK VVDGQT HGNG TVANG KEDGINAEL L
Subjt:  MACEKLVLIVNCCEFTEPMPDSPPKQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELAL
SwissProt top hitse value%identityAlignment
O22993 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic1.9e-0670.97Show/hide
Query:  RYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT
        +YLKNP++ DK+GIK PHGVL +GPPG GKT
Subjt:  RYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT
P53549 26S proteasome subunit RPT46.9e-0468.97Show/hide
Query:  LKNPEVLDKVGIKHPHGVLSKGPPGYGKT
        LKNPE+  +VGIK P GVL  GPPG GKT
Subjt:  LKNPEVLDKVGIKHPHGVLSKGPPGYGKT
Arabidopsis top hitse value%identityAlignment
AT3G01610.1 cell division cycle 48C4.1e-0434.88Show/hide
Query:  KQKAKEKTVVDGQTGHGN---GGTVANGEKE-DGINAELALLLLKMQFYTIVGSRYLKNPEVLDKVGIKHPHGVLSKGPPGYGKTE
        +++AK    + G TG+G+    GT     K+  GI   L  L + + F  +       NPE   K+G+K P G+L  GPPG GKT+
Subjt:  KQKAKEKTVVDGQTGHGN---GGTVANGEKE-DGINAELALLLLKMQFYTIVGSRYLKNPEVLDKVGIKHPHGVLSKGPPGYGKTE
AT4G23940.1 FtsH extracellular protease family1.4e-0770.97Show/hide
Query:  RYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT
        +YLKNP++ DK+GIK PHGVL +GPPG GKT
Subjt:  RYLKNPEVLDKVGIKHPHGVLSKGPPGYGKT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGTGAAAAGCTTGTGTTAATTGTTAACTGTTGCGAATTTACTGAGCCAATGCCAGATTCCCCACCGAAACAAAAAGCGAAGGAAAAAACAGTTGTTGATGGTCA
GACTGGACACGGTAATGGTGGAACAGTAGCTAATGGTGAGAAGGAAGATGGCATCAATGCTGAGCTAGCCTTGCTCCTTTTGAAGATGCAATTCTATACTATAGTTGGTT
CAAGATACTTGAAAAATCCTGAAGTGCTTGACAAAGTAGGAATAAAGCATCCTCATGGAGTTCTTTCGAAAGGACCTCCTGGCTATGGTAAGACTGAAGGTAGTGTTCTA
AATATTAGTATTGGGGTTCGAAGCATGAGCAGAGTATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATGTGAAAAGCTTGTGTTAATTGTTAACTGTTGCGAATTTACTGAGCCAATGCCAGATTCCCCACCGAAACAAAAAGCGAAGGAAAAAACAGTTGTTGATGGTCA
GACTGGACACGGTAATGGTGGAACAGTAGCTAATGGTGAGAAGGAAGATGGCATCAATGCTGAGCTAGCCTTGCTCCTTTTGAAGATGCAATTCTATACTATAGTTGGTT
CAAGATACTTGAAAAATCCTGAAGTGCTTGACAAAGTAGGAATAAAGCATCCTCATGGAGTTCTTTCGAAAGGACCTCCTGGCTATGGTAAGACTGAAGGTAGTGTTCTA
AATATTAGTATTGGGGTTCGAAGCATGAGCAGAGTATATTAG
Protein sequenceShow/hide protein sequence
MACEKLVLIVNCCEFTEPMPDSPPKQKAKEKTVVDGQTGHGNGGTVANGEKEDGINAELALLLLKMQFYTIVGSRYLKNPEVLDKVGIKHPHGVLSKGPPGYGKTEGSVL
NISIGVRSMSRVY