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Pay0010046 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010046
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr07:8714572..8717284
RNA-Seq ExpressionPay0010046
SyntenyPay0010046
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025506.1 transcription initiation factor TFIID subunit 2-like [Cucumis melo var. makuwa]3.5e-2480.26Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        M V RYDIEKFDGKG FTLWKAK+KAIVGQ+K LKA+ DPEKLPK M QE+ ET+ENAAY AIVLNLSDNVLRE+I
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-1655.26Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        MT  +++IEKFDG GDFTLW  +I AI+G QKALKAL DP++LP  + + + ET+E  AYS +++N++DNVLR++I
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

XP_016899859.1 PREDICTED: uncharacterized protein LOC107990692 [Cucumis melo]3.7e-5086.89Show/hide
Query:  MVTWRPMWHPLDHTPGSIYKLVLEP-----------ILDFKKLKMTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIE
        MVTWRPMWHPLDHTPGSIYKLVLEP           ILDFKKLK+ VARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNET+E
Subjt:  MVTWRPMWHPLDHTPGSIYKLVLEP-----------ILDFKKLKMTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIE

Query:  NAAYSAIVLNLSDNVLRELILS
        NAAYSAIVLNLSD+VLRELI S
Subjt:  NAAYSAIVLNLSDNVLRELILS

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]5.9e-1657.89Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        MT  RY+IEKF+ K DF LWKAKIK ++ +QKAL A+TDP K PKI+ + + ETIE+ AY  IVLN+ D+VLR+++
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]5.9e-1660.53Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        MT  R++IEKFDGK DF LWKAKIKA++GQQKAL A+TD  K PK     + E IE  AY  IVLN++DNVLR+++
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

TrEMBL top hitse value%identityAlignment
A0A1S4DV47 uncharacterized protein LOC1079906921.8e-5086.89Show/hide
Query:  MVTWRPMWHPLDHTPGSIYKLVLEP-----------ILDFKKLKMTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIE
        MVTWRPMWHPLDHTPGSIYKLVLEP           ILDFKKLK+ VARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNET+E
Subjt:  MVTWRPMWHPLDHTPGSIYKLVLEP-----------ILDFKKLKMTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIE

Query:  NAAYSAIVLNLSDNVLRELILS
        NAAYSAIVLNLSD+VLRELI S
Subjt:  NAAYSAIVLNLSDNVLRELILS

A0A5A7TKQ1 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-1554.05Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRE
        MT  +++IEKFDG GD TLW  +I  I+G QKALKAL DP++LP  + + + ET+EN AY  +V+N++DNVLR+
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRE

A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-945.8e-1755.26Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        MT  +++IEKFDG GDFTLW  +I AI+G QKALKAL DP++LP  + + + ET+E  AYS +++N++DNVLR++I
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

A0A5D3BQH4 Transcription initiation factor TFIID subunit 2-like1.7e-2480.26Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        M V RYDIEKFDGKG FTLWKAK+KAIVGQ+K LKA+ DPEKLPK M QE+ ET+ENAAY AIVLNLSDNVLRE+I
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

A0A5D3CRK9 Putative polyprotein3.2e-1554.05Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRE
        MT  +++IEKFDG GD TLW  +I  I+G QKALKAL DP++LP  + + + ET+EN AY  +V+N++DNVLR+
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRE

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.9e-0534.21Show/hide
Query:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI
        M+  +Y++ KF+G   F+ W+ +++ ++ QQ   K L    K P  M  ED   ++  A SAI L+LSD+V+  +I
Subjt:  MTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACATGGCGGCCAATGTGGCATCCTCTTGACCATACACCTGGCAGTATCTACAAATTGGTATTGGAGCCTATTCTTGATTTCAAGAAACTTAAGATGACAGTAGC
AAGATATGATATTGAGAAGTTTGATGGTAAGGGAGATTTTACCTTATGGAAAGCAAAGATCAAAGCCATAGTCGGCCAGCAAAAGGCACTGAAAGCTCTCACAGATCCAG
AAAAACTACCTAAAATAATGATTCAAGAAGACAATGAAACTATAGAAAATGCAGCCTATAGTGCCATAGTTCTAAACCTAAGTGATAATGTCCTTAGGGAACTCATCTTA
TCATATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAATCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGACATGGCGGCCAATGTGGCATCCTCTTGACCATACACCTGGCAGTATCTACAAATTGGTATTGGAGCCTATTCTTGATTTCAAGAAACTTAAGATGACAGTAGC
AAGATATGATATTGAGAAGTTTGATGGTAAGGGAGATTTTACCTTATGGAAAGCAAAGATCAAAGCCATAGTCGGCCAGCAAAAGGCACTGAAAGCTCTCACAGATCCAG
AAAAACTACCTAAAATAATGATTCAAGAAGACAATGAAACTATAGAAAATGCAGCCTATAGTGCCATAGTTCTAAACCTAAGTGATAATGTCCTTAGGGAACTCATCTTA
TCATATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAATCACTAG
Protein sequenceShow/hide protein sequence
MVTWRPMWHPLDHTPGSIYKLVLEPILDFKKLKMTVARYDIEKFDGKGDFTLWKAKIKAIVGQQKALKALTDPEKLPKIMIQEDNETIENAAYSAIVLNLSDNVLRELIL
SYAMSLHKTGPRNSNH