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Pay0010063 (gene) of Melon (Payzawat) v1 genome

Gene IDPay0010063
OrganismCucumis melo var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionRetrotransposon protein
Genome locationchr05:15842706..15843818
RNA-Seq ExpressionPay0010063
SyntenyPay0010063
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032340.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.9e-9982.91Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL--------------GFLT
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL              GFLT
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL--------------GFLT

Query:  LYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTT
         YRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK                        EMTYCDDVYDVDEGDSAYATTT
Subjt:  LYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTT

Query:  ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

KAA0047370.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-7961.96Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPV-------------------
        MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NRVIQREFVRSGETVS HFN+VLLAVV+LYEELIKRPV                   
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPV-------------------

Query:  ------------------------------------------------------------LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARN
                                                                     GF  LYRGQRYHLQEWRGA NAP N  EYFNMKHSSARN
Subjt:  ------------------------------------------------------------LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARN

Query:  VIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        VIE AF V KG WAIL GK EMTYC DV DVDEGDS YATT ASEDIHYIET NEWSQWRDELAESMFTDW+LRNA
Subjt:  VIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

KAA0063861.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-7962.78Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRP--------------------
        MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR+IQ EFVRS ETVS HFN+VLLAVVRLYE+LIKRP                    
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRP--------------------

Query:  --------------------------VLGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK--------------
                                  V GFL  YRGQRYHLQEWRG  NAP N KEYFNMKHSSARNVIERAFGV KG W IL GK              
Subjt:  --------------------------VLGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK--------------

Query:  ----------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
                  EMTYC+DV DVDEGDS YATTTASEDIHYIET NEWSQW DEL +SMFTDW+LRNA
Subjt:  ----------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

TYK19044.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.9e-10288.18Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLT YRGQRYHLQEWRG
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG

Query:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW
        AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK                        EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW
Subjt:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW

Query:  SQWRDELAESMFTDWKLRNA
        SQWRDELAESMFTDWKLRNA
Subjt:  SQWRDELAESMFTDWKLRNA

XP_016899482.1 PREDICTED: uncharacterized protein LOC107990543 [Cucumis melo]1.1e-10498.48Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLT YRGQRYHLQEWRG
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG

Query:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

TrEMBL top hitse value%identityAlignment
A0A1S4DU05 uncharacterized protein LOC1079905435.1e-10598.48Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLT YRGQRYHLQEWRG
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG

Query:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5A7SNH9 Putative nuclease HARBI11.9e-9982.91Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL--------------GFLT
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL              GFLT
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVL--------------GFLT

Query:  LYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTT
         YRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK                        EMTYCDDVYDVDEGDSAYATTT
Subjt:  LYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTT

Query:  ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  ASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5A7TW41 Retrotransposon protein2.8e-7961.96Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPV-------------------
        MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NRVIQREFVRSGETVS HFN+VLLAVV+LYEELIKRPV                   
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPV-------------------

Query:  ------------------------------------------------------------LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARN
                                                                     GF  LYRGQRYHLQEWRGA NAP N  EYFNMKHSSARN
Subjt:  ------------------------------------------------------------LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARN

Query:  VIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        VIE AF V KG WAIL GK EMTYC DV DVDEGDS YATT ASEDIHYIET NEWSQWRDELAESMFTDW+LRNA
Subjt:  VIERAFGVFKGHWAILHGK-EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5A7VDR4 Retrotransposon protein2.2e-7962.78Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRP--------------------
        MD RTF ILCHLLRNVAGLSSTEIV+VEEMVAMFLHVLAHDV NR+IQ EFVRS ETVS HFN+VLLAVVRLYE+LIKRP                    
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRP--------------------

Query:  --------------------------VLGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK--------------
                                  V GFL  YRGQRYHLQEWRG  NAP N KEYFNMKHSSARNVIERAFGV KG W IL GK              
Subjt:  --------------------------VLGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK--------------

Query:  ----------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
                  EMTYC+DV DVDEGDS YATTTASEDIHYIET NEWSQW DEL +SMFTDW+LRNA
Subjt:  ----------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5D3D656 Putative nuclease HARBI12.4e-10288.18Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG
        MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNR IQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLT YRGQRYHLQEWRG
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRG

Query:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW
        AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK                        EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW
Subjt:  AGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAILHGK------------------------EMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEW

Query:  SQWRDELAESMFTDWKLRNA
        SQWRDELAESMFTDWKLRNA
Subjt:  SQWRDELAESMFTDWKLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10890.1 unknown protein2.0e-0829.03Show/hide
Query:  GLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKR-----------------------------------PVL
        GL   E V +EE VAMFL  +  + T R I   + +S   V    + VL A+++   + +K                                       
Subjt:  GLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKR-----------------------------------PVL

Query:  GFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAIL
        G+L  +R   YHL ++ G G  P+  +E FN KH   R+VI+R FGV+K  W IL
Subjt:  GFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAIL

AT5G28730.1 unknown protein2.3e-0435.9Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIK
        M    F  LC +L    GL S+  ++++E VA+FL + A + T R I   F  + ET+   F+ VL A+ RL  E I+
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIK

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.1e-1054.55Show/hide
Query:  LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAI
        L FL  +RG RYHLQE+ G    P    E FN++H S RNVIER FG+FK  +AI
Subjt:  LGFLTLYRGQRYHLQEWRGAGNAPINAKEYFNMKHSSARNVIERAFGVFKGHWAI

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.6e-0837.18Show/hide
Query:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIK
        MD   F  LC LL+    L  T  + +E  +A+FL ++ H++  R +Q  F  SGET+S HFN VL AV+ + ++  +
Subjt:  MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGCGAACATTCGTAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCATCGACAGAGATTGTCAATGTTGAGGAAATGGTAGCAATGTTCTTGCACGT
CCTTGCTCATGACGTAACGAACCGCGTCATTCAACGGGAATTTGTACGATCCGGTGAGACAGTATCTTTACATTTTAACCTCGTATTGTTGGCTGTGGTTCGACTGTACG
AGGAGTTGATAAAGAGACCTGTTCTGGGATTTCTCACTCTTTACAGAGGCCAGCGGTACCACTTGCAAGAGTGGCGTGGTGCTGGAAATGCACCAATAAATGCAAAGGAG
TACTTCAACATGAAGCACTCTTCGGCAAGGAATGTCATTGAGCGCGCCTTCGGTGTTTTTAAGGGTCATTGGGCCATTCTTCATGGAAAAGAAATGACATATTGTGACGA
CGTTTACGATGTGGACGAGGGGGATTCTGCATACGCGACAACTACTGCTTCAGAAGACATCCACTACATTGAGACGAAAAACGAGTGGTCTCAGTGGCGTGATGAACTAG
CCGAATCGATGTTCACAGATTGGAAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACATGCGAACATTCGTAATTCTATGCCATTTACTTAGAAATGTGGCTGGTCTTTCATCGACAGAGATTGTCAATGTTGAGGAAATGGTAGCAATGTTCTTGCACGT
CCTTGCTCATGACGTAACGAACCGCGTCATTCAACGGGAATTTGTACGATCCGGTGAGACAGTATCTTTACATTTTAACCTCGTATTGTTGGCTGTGGTTCGACTGTACG
AGGAGTTGATAAAGAGACCTGTTCTGGGATTTCTCACTCTTTACAGAGGCCAGCGGTACCACTTGCAAGAGTGGCGTGGTGCTGGAAATGCACCAATAAATGCAAAGGAG
TACTTCAACATGAAGCACTCTTCGGCAAGGAATGTCATTGAGCGCGCCTTCGGTGTTTTTAAGGGTCATTGGGCCATTCTTCATGGAAAAGAAATGACATATTGTGACGA
CGTTTACGATGTGGACGAGGGGGATTCTGCATACGCGACAACTACTGCTTCAGAAGACATCCACTACATTGAGACGAAAAACGAGTGGTCTCAGTGGCGTGATGAACTAG
CCGAATCGATGTTCACAGATTGGAAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MDMRTFVILCHLLRNVAGLSSTEIVNVEEMVAMFLHVLAHDVTNRVIQREFVRSGETVSLHFNLVLLAVVRLYEELIKRPVLGFLTLYRGQRYHLQEWRGAGNAPINAKE
YFNMKHSSARNVIERAFGVFKGHWAILHGKEMTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA